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Report for CCDS47577.1 (current version)

CCDS Status Species Chrom. Gene CCDS Release NCBI Annotation Release Ensembl Annotation Release Links
47577.1 Public Homo sapiens 7 URGCP 24 110 108 CCDS HistoryNCBI Gene:55665Re-query CCDS DB by CCDS ID:47577.1Re-query CCDS DB by GeneID:55665See the combined annotation on chromosome 7 in Sequence Viewer

Public since: CCDS release 6, NCBI annotation release 37.1, Ensembl annotation release 55

Review status: Reviewed (by RefSeq and Havana)

Sequence IDs included in CCDS 47577.1

Original Current Source Nucleotide ID Protein ID MANE Status in CCDS Seq. Status Links
Original member Current member EBI ENST00000402306.7 ENSP00000384955.3 Accepted alive Link to Ensembl Transcript Viewer:ENST00000402306.7Link to Ensembl Protein Viewer:ENSP00000384955.3Re-query CCDS DB by Nucleotide ID:ENST00000402306Re-query CCDS DB by Protein ID:ENSP00000384955
Original member Current member NCBI NM_017920.5 NP_060390.3 Accepted alive Link to Nucleotide Sequence:NM_017920.5Link to Protein Sequence:NP_060390.3Re-query CCDS DB by Nucleotide ID:NM_017920Re-query CCDS DB by Protein ID:NP_060390Link to BLAST:NP_060390.3

RefSeq Length Related UniProtKB/SwissProt Length Identity Gaps Mismatches
NP_060390.3 922 Q8TCY9-2 922 100% 0 0

Chromosomal Locations for CCDS 47577.1

Assembly GRCh38.p14 (GCF_000001405.40)

On '-' strand of Chromosome 7 (NC_000007.14)
Genome Browser links: Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 7Link to Ensembl Genome Browser on chromosome 7See the combined annotation on chromosome 7 in Sequence Viewer

Chromosome Start Stop Links
7 43876667 43879260 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 7Link to Ensembl Genome Browser on chromosome 7
7 43881659 43881697 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 7Link to Ensembl Genome Browser on chromosome 7
7 43881907 43881957 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 7Link to Ensembl Genome Browser on chromosome 7
7 43887415 43887485 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 7Link to Ensembl Genome Browser on chromosome 7
7 43906562 43906575 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 7Link to Ensembl Genome Browser on chromosome 7

CCDS Sequence Data
Blue highlighting indicates alternating exons.
Red highlighting indicates amino acids encoded across a splice junction.
 
Mouse over the nucleotide or protein sequence below and click on the highlighted codon or residue to select the pair.

Nucleotide Sequence (2769 nt):
ATGGCGTCGCCCGGGCATTCAGATTTGGGAGAAGTAGCCCCAGAAATAAAAGCATCAGAGAGACGAACAG
CTGTGGCCATTGCAGATTTGGAATGGAGAGAAATGGAAGGAGATGATTGCGAGTTCCGTTATGGAGATGG
TACAAATGAGGCTCAGGACAATGATTTTCCAACAGTGGAGAGAAGCAGGCTTCAAGAAATGCTGTCACTT
TTGGGCCTAGAGACGTACCAGGTCCAGAAACTCAGCCTCCAGGACTCTCTGCAGATCAGTTTTGACAGTA
TGAAGAACTGGGCCCCTCAGGTTCCCAAAGACTTGCCCTGGAATTTCCTCAGGAAGTTGCAGGCCCTCAA
TGCTGATGCCAGGAATACCACTATGGTGCTGGACGTGCTCCCAGACGCCAGGCCTGTGGAGAAGGAGAGC
CAGATGGAAGAGGAGATCATCTACTGGGACCCAGCTGATGACCTTGCTGCCGACATTTATTCCTTTTCTG
AGCTGCCCACCCCTGATACGCCAGTGAACCCCTTAGACCTTCTCTGTGCCCTGCTGCTCTCCTCAGACAG
TTTCCTGCAACAAGAAATAGCGTTGAAAATGGCCCTCTGCCAGTTTGCACTCCCACTCGTGTTGCCTGAC
TCGGAGAACCACTACCATACATTTCTGCTGTGGGCCATGCGGGGCATTGTGAGGACATGGTGGTCCCAGC
CCCCAAGGGGCATGGGGAGCTTCCGGGAAGACAGCGTGGTCTTGTCCAGGGCGCCCGCCTTCGCCTTCGT
GCGCATGGACGTCAGTAGCAACTCCAAGTCCCAGCTTCTCAACGCCGTCCTCAGCCCGGGCCACAGGCAG
TGGGACTGCTTCTGGCATCGGGACCTCAACTTGGGCACCAATGCCCGGGAGATTTCGGATGGGTTGGTAG
AAATTTCCTGGTTTTTTCCCAGCGGAAGGGAGGACTTGGACATTTTCCCAGAACCTGTGGCCTTTCTGAA
CCTGAGAGGTGACATCGGGTCTCACTGGCTGCAGTTTAAGCTCTTGACAGAAATCTCCTCCGCTGTGTTT
ATATTGACTGACAATATCAGTAAGAAGGAATACAAATTGCTGTACTCCATGAAGGAGTCAACCACAAAAT
ACTACTTCATCCTGAGTCCCTACCGTGGGAAGCGCAACACAAACCTGAGATTTCTGAATAAGTTAATTCC
TGTGCTGAAAATAGACCACTCACATGTCCTGGTAAAGGTCAGCAGCACTGACAGCGACAGCTTCGTGAAG
AGGATCCGGGCCATCGTTGGGAATGTGCTGCGGGCACCCTGCAGGCGGGTATCTGTGGAGGACATGGCGC
ACGCAGCCCGCAAACTGGGCCTAAAGGTCGACGAGGACTGTGAGGAGTGTCAGAAAGCGAAAGACCGGAT
GGAGAGGATTACCAGGAAAATCAAAGACTCGGATGCCTACAGAAGGGACGAGCTGAGGCTGCAGGGGGAC
CCCTGGAGAAAGGCAGCCCAAGTGGAGAAGGAGTTCTGCCAGCTCCAGTGGGCCGTGGACCCCCCTGAGA
AGCACAGGGCTGAGCTGAGGCGGCGGCTGCTAGAACTTCGAATGCAGCAGAACGGCCATGATCCCTCCTC
GGGGGTGCAGGAGTTCATCTCGGGGATCAGCAGCCCCTCCTTGAGTGAGAAGCAGTACTTCCTGAGGTGG
ATGGAGTGGGGCCTGGCACGGGTGGCCCAGCCGCGACTGAGACAGCCTCCGGAGACGCTTCTCACCCTGA
GACCAAAGCATGGGGGCACCACAGACGTGGGGGAGCCGCTCTGGCCTGAGCCCCTAGGGGTGGAACACTT
CTTGCGGGAGATGGGACAGTTTTATGAGGCTGAGAGCTGTCTTGTGGAGGCAGGGAGGCTGCCGGCAGGC
CAGAGGCGTTTTGCCCACTTCCCAGGCTTGGCCTCGGAGCTGCTGCTGACAGGGCTGCCTCTGGAGCTAA
TCGATGGGAGCACGCTGAGCATGCCCGTCCGCTGGGTCACAGGGCTCCTGAAGGAGCTGCACGTCCGACT
GGAGAGACGGTCAAGGCTGGTGGTTCTGTCAACCGTCGGGGTGCCAGGCACGGGCAAGTCCACACTCCTC
AACACCATGTTTGGGCTGCGGTTTGCCACAGGGAAGAGCTGCGGTCCTCGAGGGGCCTTCATGCAGCTCA
TCACAGTGGCTGAGGGCTTCAGCCAGGACCTGGGCTGTGACCACATCCTGGTGATAGACTCCGGGGGCTT
GATAGGTGGGGCCTTGACGTCAGCTGGGGACAGATTTGAGCTGGAGGCTTCCTTGGCCACTCTGCTCATG
GGACTGAGCAATGTCACCGTGATCAGTCTAGCTGAAACCAAGGACATTCCAGCAGCTATTCTGCATGCAT
TTCTGAGGTTAGAAAAAACGGGGCACATGCCCAACTACCAGTTTGTATACCAGAACCTTCATGATGTATC
TGTTCCCGGCCCTAGGCCCAGAGACAAGAGACAGCTCCTGGATCCACCTGGTGACCTGAGCAGGGCTGCA
GCCCAGATGGAGAAACAGGGCGACGGCTTCCGGGCACTGGCAGGCCTGGCCTTCTGCGACCCTGAGAAGC
AGCACATCTGGCACATCCCAGGCCTGTGGCACGGAGCACCTCCCATGGCCGCAGTGAGCTTGGCCTACAG
TGAAGCCATATTTGAATTGAAGAGATGCCTACTCGAAAACATCAGGAACGGCTTGTCGAACCAAAACAAA
AACATCCAGCAGCTCATTGAGCTGGTGAGACGGCTGTGA

Translation (922 aa):
MASPGHSDLGEVAPEIKASERRTAVAIADLEWREMEGDDCEFRYGDGTNEAQDNDFPTVERSRLQEMLSL
LGLETYQVQKLSLQDSLQISFDSMKNWAPQVPKDLPWNFLRKLQALNADARNTTMVLDVLPDARPVEKES
QMEEEIIYWDPADDLAADIYSFSELPTPDTPVNPLDLLCALLLSSDSFLQQEIALKMALCQFALPLVLPD
SENHYHTFLLWAMRGIVRTWWSQPPRGMGSFREDSVVLSRAPAFAFVRMDVSSNSKSQLLNAVLSPGHRQ
WDCFWHRDLNLGTNAREISDGLVEISWFFPSGREDLDIFPEPVAFLNLRGDIGSHWLQFKLLTEISSAVF
ILTDNISKKEYKLLYSMKESTTKYYFILSPYRGKRNTNLRFLNKLIPVLKIDHSHVLVKVSSTDSDSFVK
RIRAIVGNVLRAPCRRVSVEDMAHAARKLGLKVDEDCEECQKAKDRMERITRKIKDSDAYRRDELRLQGD
PWRKAAQVEKEFCQLQWAVDPPEKHRAELRRRLLELRMQQNGHDPSSGVQEFISGISSPSLSEKQYFLRW
MEWGLARVAQPRLRQPPETLLTLRPKHGGTTDVGEPLWPEPLGVEHFLREMGQFYEAESCLVEAGRLPAG
QRRFAHFPGLASELLLTGLPLELIDGSTLSMPVRWVTGLLKELHVRLERRSRLVVLSTVGVPGTGKSTLL
NTMFGLRFATGKSCGPRGAFMQLITVAEGFSQDLGCDHILVIDSGGLIGGALTSAGDRFELEASLATLLM
GLSNVTVISLAETKDIPAAILHAFLRLEKTGHMPNYQFVYQNLHDVSVPGPRPRDKRQLLDPPGDLSRAA
AQMEKQGDGFRALAGLAFCDPEKQHIWHIPGLWHGAPPMAAVSLAYSEAIFELKRCLLENIRNGLSNQNK
NIQQLIELVRRL


Links Key
 Links to:   History report
  BLAST report
  Entrez Gene
  Nucleotide report
  Protein report
 Re-query CCDS DB by:   CCDS ID
  Gene ID
  Nucleotide ID
  Protein ID
 Genome Browser Links:   Ensembl Genome Browser
  NCBI Sequence Viewer
  UCSC Genome Browser
  VEGA Genome Browser

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