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Report for CCDS47336.1 (current version)

CCDS Status Species Chrom. Gene CCDS Release NCBI Annotation Release Ensembl Annotation Release Links
47336.1 Public Homo sapiens 5 INSYN2B 24 110 108 CCDS HistoryNCBI Gene:100131897Re-query CCDS DB by CCDS ID:47336.1Re-query CCDS DB by GeneID:100131897See the combined annotation on chromosome 5 in Sequence Viewer

Public since: CCDS release 6, NCBI annotation release 37.1, Ensembl annotation release 55

Review status: Reviewed (by RefSeq and Havana)

Sequence IDs included in CCDS 47336.1

Original Current Source Nucleotide ID Protein ID MANE Status in CCDS Seq. Status Links
Original member Current member EBI ENST00000377365.4 ENSP00000366582.3 MANE Select Accepted alive Link to Ensembl Transcript Viewer:ENST00000377365.4Link to Ensembl Protein Viewer:ENSP00000366582.3Re-query CCDS DB by Nucleotide ID:ENST00000377365Re-query CCDS DB by Protein ID:ENSP00000366582
Original member Current member NCBI NM_001129891.3 NP_001123363.1 MANE Select Accepted alive Link to Nucleotide Sequence:NM_001129891.3Link to Protein Sequence:NP_001123363.1Re-query CCDS DB by Nucleotide ID:NM_001129891Re-query CCDS DB by Protein ID:NP_001123363Link to BLAST:NP_001123363.1
Original member Current member NCBI NM_001346304.2 NP_001333233.1 Accepted alive Link to Nucleotide Sequence:NM_001346304.2Link to Protein Sequence:NP_001333233.1Re-query CCDS DB by Nucleotide ID:NM_001346304Re-query CCDS DB by Protein ID:NP_001333233Link to BLAST:NP_001333233.1

RefSeq Length Related UniProtKB/SwissProt Length Identity Gaps Mismatches
NP_001123363.1 535 A6NMK8 535 100% 0 0
NP_001333233.1 535 A6NMK8 535 100% 0 0

Chromosomal Locations for CCDS 47336.1

Assembly GRCh38.p14 (GCF_000001405.40)

On '-' strand of Chromosome 5 (NC_000005.10)
Genome Browser links: Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 5Link to Ensembl Genome Browser on chromosome 5See the combined annotation on chromosome 5 in Sequence Viewer

Chromosome Start Stop Links
5 169864273 169864459 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 5Link to Ensembl Genome Browser on chromosome 5
5 169881368 169881442 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 5Link to Ensembl Genome Browser on chromosome 5
5 169882553 169883898 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 5Link to Ensembl Genome Browser on chromosome 5

CCDS Sequence Data
Blue highlighting indicates alternating exons.
Red highlighting indicates amino acids encoded across a splice junction.
 
Mouse over the nucleotide or protein sequence below and click on the highlighted codon or residue to select the pair.

Nucleotide Sequence (1608 nt):
ATGGCCCAGCAAAATATGAAAGTGAGACCTGTGCTTCTAAAGCGTAACAGTCTAGAATCAGTGGAGTTTG
TGAAACAACCTCACCACCGCAGGAGCAAATCCCAGCAGGTGAGATTCAAGGAAGATGGGACCACTAAGAA
TCCAACTGGCCTAGCTGAGGTTGACGTCCAAACTCCAGAAGACCCGGCTGTGATGGGGAAGACTCAAGCA
ACCAGGCACCATCTTCCCCCCACCTACTCGCTCTCCTTCCCCAGGTCCCAGAAGGCAGGGGGCTTTCGCA
ACATTGCAATCCAAACTTCCCCCAGTCTCAGGAAGCATTTCCCAGTTTTCAAAAGGAAGAGACTCACAGC
CAGTAAGTCCCTGGTGGAAATGCCAACAGCCTCCCAAAGTGCCATCCAGGTCAACGGTAACCTCTCTGAA
CAGGACATTGTGTCTTCTGACCTTGCCTACTTAAGGTTGGCTCAGCATCTTGAGGATGGGCCTCGAAGGG
TCAAGGTGTCCCATGCATTCCTCCCAAGGGTCCCCAAGGTGCAAAGCAATGGTCCTGTTAGCATATGCTT
GGAAGCAGGAACTTGGAGGTCCTTAGAGAAAGCCACAGCTGCCATTCAGGTTCCAGATGATATTTATCAC
AGTCCTTCCTGGGAAGCTAGAGAGTCTGCTCTCAGCCCAGACAGGTCAGCTGAAGTAAGTAACTCCATAC
ACCCTTTGGATGACACACGTCCAGGTGATGGGAGAAGGGTGACTCCACTAGATTCAGAAAAATCCACCTC
CTGCTTAAATGCCACCAGCGTTGCCAGCCACACACCAGGCACAGAGGAACTTAAACCTGAATTGCTTTTG
CCCAAAGACAACTCAGATGACAAAGACCTTGGCTCACTGTCATCTCAGTCAAAGGAAACGTGTGTTCCTT
CATCTCCACGGACTCACAGTTCCCCCTCACAAGGCTCCCACAGCCAGCCAGCCCACCCAGGAAGAGCCTC
AGACTGTCCTTCATCAAGTAACAATCACCAGAATCTGGTGTCACTCAAAACTAACAGTGCATCGAAATCT
GCCCCTGGGTGTCAGGAGCAGACGGCAAACAACCCCACCGAGTCAGACACACTGGAGTTTCCAAATTGTC
CAGGAAGTAATCATCTCCCATCCTCTCTTTCAAGGAGTGAGACCAAACTTCAGAGCAACAGGGAGATTAG
TGACATTAATCAAATTCACCTGGCACGGGGTGAACTCTGCGACCTCCAAGGCCGACTGCAATCTGTGGAG
GAATCTCTGCACTCGAACCAAGAGAAAATTAAAGTCCTTTTGAATGTAATTCAAGACTTGGAGAAAGCTC
GAGCTCTCACTGAAGGGCGCAACTTTTATCGAACTGGCCAAGATCTCAACAATTGCAGTACCTGCCAGAA
CACGGCGTGCATCATATACAGTGTAGAGTATGATTTTCGGCAGCAGGAAGGCAGGTTCCATGAAGTTTTG
CAGAGTCTGGAGGAAGCAGAGCCAGTTGAGGAGGCATCGCCCCCACCAAAGTCCCCAGCAGAACCCCCAG
CCCCGGAAAAGCAGGACTTAAGGCGGAAAACCAAGAAGGTGAAAAAGAAATGCTTCTGGTGGATCTGA

Translation (535 aa):
MAQQNMKVRPVLLKRNSLESVEFVKQPHHRRSKSQQVRFKEDGTTKNPTGLAEVDVQTPEDPAVMGKTQA
TRHHLPPTYSLSFPRSQKAGGFRNIAIQTSPSLRKHFPVFKRKRLTASKSLVEMPTASQSAIQVNGNLSE
QDIVSSDLAYLRLAQHLEDGPRRVKVSHAFLPRVPKVQSNGPVSICLEAGTWRSLEKATAAIQVPDDIYH
SPSWEARESALSPDRSAEVSNSIHPLDDTRPGDGRRVTPLDSEKSTSCLNATSVASHTPGTEELKPELLL
PKDNSDDKDLGSLSSQSKETCVPSSPRTHSSPSQGSHSQPAHPGRASDCPSSSNNHQNLVSLKTNSASKS
APGCQEQTANNPTESDTLEFPNCPGSNHLPSSLSRSETKLQSNREISDINQIHLARGELCDLQGRLQSVE
ESLHSNQEKIKVLLNVIQDLEKARALTEGRNFYRTGQDLNNCSTCQNTACIIYSVEYDFRQQEGRFHEVL
QSLEEAEPVEEASPPPKSPAEPPAPEKQDLRRKTKKVKKKCFWWI


Links Key
 Links to:   History report
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  Nucleotide report
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 Re-query CCDS DB by:   CCDS ID
  Gene ID
  Nucleotide ID
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 Genome Browser Links:   Ensembl Genome Browser
  NCBI Sequence Viewer
  UCSC Genome Browser
  VEGA Genome Browser

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