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Report for CCDS47116.1 (current version)

CCDS Status Species Chrom. Gene CCDS Release NCBI Annotation Release Ensembl Annotation Release Links
47116.1 Public Homo sapiens 4 BANK1 24 110 108 CCDS HistoryNCBI Gene:55024Re-query CCDS DB by CCDS ID:47116.1Re-query CCDS DB by GeneID:55024See the combined annotation on chromosome 4 in Sequence Viewer

Public since: CCDS release 6, NCBI annotation release 37.1, Ensembl annotation release 55

Review status: Reviewed (by RefSeq and Havana)

Sequence IDs included in CCDS 47116.1

Original Current Source Nucleotide ID Protein ID MANE Status in CCDS Seq. Status Links
Original member Current member EBI ENST00000444316.2 ENSP00000388817.2 Accepted alive Link to Ensembl Transcript Viewer:ENST00000444316.2Link to Ensembl Protein Viewer:ENSP00000388817.2Re-query CCDS DB by Nucleotide ID:ENST00000444316Re-query CCDS DB by Protein ID:ENSP00000388817
Original member Current member NCBI NM_001083907.3 NP_001077376.3 Accepted alive Link to Nucleotide Sequence:NM_001083907.3Link to Protein Sequence:NP_001077376.3Re-query CCDS DB by Nucleotide ID:NM_001083907Re-query CCDS DB by Protein ID:NP_001077376Link to BLAST:NP_001077376.3

RefSeq Length Related UniProtKB/SwissProt Length Identity Gaps Mismatches
NP_001077376.3 755 Q8NDB2-3 755 100% 0 0

Chromosomal Locations for CCDS 47116.1

Assembly GRCh38.p14 (GCF_000001405.40)

On '+' strand of Chromosome 4 (NC_000004.12)
Genome Browser links: Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 4Link to Ensembl Genome Browser on chromosome 4See the combined annotation on chromosome 4 in Sequence Viewer

Chromosome Start Stop Links
4 101829828 101830206 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 4Link to Ensembl Genome Browser on chromosome 4
4 101855035 101855189 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 4Link to Ensembl Genome Browser on chromosome 4
4 101862526 101862664 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 4Link to Ensembl Genome Browser on chromosome 4
4 101870505 101870644 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 4Link to Ensembl Genome Browser on chromosome 4
4 101895305 101895410 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 4Link to Ensembl Genome Browser on chromosome 4
4 101917993 101918189 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 4Link to Ensembl Genome Browser on chromosome 4
4 102021514 102021592 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 4Link to Ensembl Genome Browser on chromosome 4
4 102025201 102025509 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 4Link to Ensembl Genome Browser on chromosome 4
4 102029960 102030265 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 4Link to Ensembl Genome Browser on chromosome 4
4 102043839 102043907 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 4Link to Ensembl Genome Browser on chromosome 4
4 102060211 102060389 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 4Link to Ensembl Genome Browser on chromosome 4
4 102063075 102063138 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 4Link to Ensembl Genome Browser on chromosome 4
4 102071275 102071304 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 4Link to Ensembl Genome Browser on chromosome 4
4 102072345 102072400 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 4Link to Ensembl Genome Browser on chromosome 4
4 102073684 102073743 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 4Link to Ensembl Genome Browser on chromosome 4

CCDS Sequence Data
Blue highlighting indicates alternating exons.
Red highlighting indicates amino acids encoded across a splice junction.
 
Mouse over the nucleotide or protein sequence below and click on the highlighted codon or residue to select the pair.

Nucleotide Sequence (2268 nt):
ATGATATATGAAGAAGATGCTGAGGAATGGGCTCTGTACTTGACAGAAGTATTTTTACATGTTGTGAAAA
GGGAAGCCATCCTGTTATATCGCTTGGAGAATTTCTCTTTTCGGCATTTGGAGTTGCTGAACTTAACGTC
TTACAAATGTAAACTTTTGATATTATCAAATAGCCTGCTTAGAGACCTAACTCCAAAGAAATGTCAGTTT
CTGGAAAAGATACTTCATTCACCAAAAAGTGTAGTTACTTTGCTTTGTGGAGTGAAGAGTTCAGATCAGC
TCTATGAATTACTAAATATCTCTCAAAGCAGATGGGAGATCTCAACTGAACAGGAACCTGAAGACTACAT
CTCTGTAATCCAGAGTATCATATTCAAAGATTCTGAAGACTACTTTGAGGTCAACATTCCAACAGACCTA
CGAGCAAAACATTCTGGGGAAATAAGTGAGAGAAAGGAAATTGAAGAACTATCAGAAGCTTCAAGAAACA
CCATACCACTAGCAGTGGTGCTTCCCACTGAAATTCCATGTGAGAATCCTGGTGAAATATTCATAATTTT
GAGAGATGAAGTAATTGGTGATACTGTAGAGGTTGAATTTACATCAAGTAATAAGCGCATTAGAACACGG
CCAGCCCTTTGGAATAAGAAAGTCTGGTGCATGAAAGCTTTAGAGTTTCCTGCTGGTTCAGTCCATGTCA
ATGTCTACTGTGATGGAATCGTTAAAGCTACAACCAAAATTAAGTACTACCCAACAGCAAAGGCAAAGGA
ATGCCTATTCAGAATGGCAGATTCAGGAGAGAGTTTGTGCCAGAATAGCATTGAAGAACTTGATGGTGTC
CTTACATCCATATTCAAACATGAGATACCATATTATGAGTTCCAGTCTCTTCAAACTGAAATTTGTTCTC
AAAACAAATATACTCATTTCAAAGAACTTCCAACTCTTCTCCACTGTGCAGCAAAATTTGGCTTAAAGAA
CCTGGCTATTCATTTGCTTCAATGTTCAGGAGCAACCTGGGCATCTAAGATGAAAAATATGGAGGGTTCA
GACCCCGCACATATTGCTGAAAGGCATGGTCACAAAGAACTCAAGAAAATCTTCGAAGACTTTTCAATCC
AAGAAATTGACATAAATAATGAGCAAGAAAATGATTATGAAGAGGATATTGCCTCATTTTCCACATATAT
TCCTTCCACACAGAACCCAGCATTTCATCATGAAAGCAGGAAGACATACGGGCAGAGTGCAGATGGAGCT
GAGGCAAATGAAATGGAAGGGGAAGGAAAACAGAATGGATCAGGCATGGAGACCAAACACAGCCCACTAG
AGGTTGGCAGTGAGAGTTCTGAAGACCAGTATGATGACTTGTATGTGTTCATTCCTGGTGCTGATCCAGA
AAATAATTCACAAGAGCCACTCATGAGCAGCAGACCTCCTCTCCCCCCGCCGCGACCTGTAGCTAATGCC
TTCCAACTGGAAAGACCTCACTTCACCTTACCAGGGACAATGGTGGAAGGCCAAATGGAAAGAAGTCAAA
ACTGGGGTCATCCTGGTGTTAGACAAGAAACAGGAGATGAACCCAAAGGAGAAAAAGAGAAGAAAGAAGA
GGAAAAAGAGCAGGAGGAGGAAGAAGACCCATATACTTTTGCTGAGATTGATGACAGTGAATATGACATG
ATATTGGCCAATCTGAGTATAAAGAAAAAAACTGGGAGTCGGTCTTTCATTATAAATAGACCTCCTGCCC
CCACACCCCGACCCACAAGTATACCTCCAAAAGAGGAAACTACACCTTACATAGCTCAAGTGTTTCAACA
AAAGACAGCCAGAAGACAATCTGATGATGACAAGTTCTGTGGTCTTCCTAAGAAACAAGACAGAGCTCGG
ATAGAGAGTCCAGCCTTTTCTACTCTCAGGGGCTGTCTAACTGATGGTCAGGAAGAACTCATCCTCCTGC
AGGAGAAAGTAAAGAATGGGAAAATGTCTATGGATGAAGCTCTGGAGAAATTTAAACACTGGCAGATGGG
AAAAAGTGGCCTGGAAATGATTCAGCAGGAGAAATTACGACAACTACGAGACTGCATTATTGGGAAAAGG
CCAGAAGAAGAAAATGTCTATAATAAACTCACCATTGTGCACCATCCAGGTGGTAAGGAAACTGCCCACA
ATGAAAATAAGTTTTATAATGTACACTTCAGCAATAAGCTTCCTGCTCGACCCCAAGTTGAAAAGGAATT
TGGTTTCTGTTGCAAGAAAGATCATTAA

Translation (755 aa):
MIYEEDAEEWALYLTEVFLHVVKREAILLYRLENFSFRHLELLNLTSYKCKLLILSNSLLRDLTPKKCQF
LEKILHSPKSVVTLLCGVKSSDQLYELLNISQSRWEISTEQEPEDYISVIQSIIFKDSEDYFEVNIPTDL
RAKHSGEISERKEIEELSEASRNTIPLAVVLPTEIPCENPGEIFIILRDEVIGDTVEVEFTSSNKRIRTR
PALWNKKVWCMKALEFPAGSVHVNVYCDGIVKATTKIKYYPTAKAKECLFRMADSGESLCQNSIEELDGV
LTSIFKHEIPYYEFQSLQTEICSQNKYTHFKELPTLLHCAAKFGLKNLAIHLLQCSGATWASKMKNMEGS
DPAHIAERHGHKELKKIFEDFSIQEIDINNEQENDYEEDIASFSTYIPSTQNPAFHHESRKTYGQSADGA
EANEMEGEGKQNGSGMETKHSPLEVGSESSEDQYDDLYVFIPGADPENNSQEPLMSSRPPLPPPRPVANA
FQLERPHFTLPGTMVEGQMERSQNWGHPGVRQETGDEPKGEKEKKEEEKEQEEEEDPYTFAEIDDSEYDM
ILANLSIKKKTGSRSFIINRPPAPTPRPTSIPPKEETTPYIAQVFQQKTARRQSDDDKFCGLPKKQDRAR
IESPAFSTLRGCLTDGQEELILLQEKVKNGKMSMDEALEKFKHWQMGKSGLEMIQQEKLRQLRDCIIGKR
PEEENVYNKLTIVHHPGGKETAHNENKFYNVHFSNKLPARPQVEKEFGFCCKKDH


Links Key
 Links to:   History report
  BLAST report
  Entrez Gene
  Nucleotide report
  Protein report
 Re-query CCDS DB by:   CCDS ID
  Gene ID
  Nucleotide ID
  Protein ID
 Genome Browser Links:   Ensembl Genome Browser
  NCBI Sequence Viewer
  UCSC Genome Browser
  VEGA Genome Browser

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