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Report for CCDS46488.1 (current version)

CCDS Status Species Chrom. Gene CCDS Release NCBI Annotation Release Ensembl Annotation Release Links
46488.1 Public Homo sapiens 2 FLACC1 24 110 108 CCDS HistoryNCBI Gene:130540Re-query CCDS DB by CCDS ID:46488.1Re-query CCDS DB by GeneID:130540See the combined annotation on chromosome 2 in Sequence Viewer

Public since: CCDS release 6, NCBI annotation release 37.1, Ensembl annotation release 55

Review status: Reviewed (by RefSeq and Havana)

Sequence IDs included in CCDS 46488.1

Original Current Source Nucleotide ID Protein ID MANE Status in CCDS Seq. Status Links
Original member Current member EBI ENST00000392257.8 ENSP00000376086.3 MANE Select Accepted alive Link to Ensembl Transcript Viewer:ENST00000392257.8Link to Ensembl Protein Viewer:ENSP00000376086.3Re-query CCDS DB by Nucleotide ID:ENST00000392257Re-query CCDS DB by Protein ID:ENSP00000376086
Original member Current member EBI ENST00000439709.5 ENSP00000412073.1 Accepted alive Link to Ensembl Transcript Viewer:ENST00000439709.5Link to Ensembl Protein Viewer:ENSP00000412073.1Re-query CCDS DB by Nucleotide ID:ENST00000439709Re-query CCDS DB by Protein ID:ENSP00000412073
Original member Current member NCBI NM_001127391.3 NP_001120863.1 MANE Select Accepted alive Link to Nucleotide Sequence:NM_001127391.3Link to Protein Sequence:NP_001120863.1Re-query CCDS DB by Nucleotide ID:NM_001127391Re-query CCDS DB by Protein ID:NP_001120863Link to BLAST:NP_001120863.1
Original member Current member NCBI NM_001289993.2 NP_001276922.1 Accepted alive Link to Nucleotide Sequence:NM_001289993.2Link to Protein Sequence:NP_001276922.1Re-query CCDS DB by Nucleotide ID:NM_001289993Re-query CCDS DB by Protein ID:NP_001276922Link to BLAST:NP_001276922.1

RefSeq Length Related UniProtKB/SwissProt Length Identity Gaps Mismatches
NP_001120863.1 422 Q96Q35-2 422 100% 0 0
NP_001276922.1 422 Q96Q35-2 422 100% 0 0

Chromosomal Locations for CCDS 46488.1

Assembly GRCh38.p14 (GCF_000001405.40)

On '-' strand of Chromosome 2 (NC_000002.12)
Genome Browser links: Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 2Link to Ensembl Genome Browser on chromosome 2See the combined annotation on chromosome 2 in Sequence Viewer

Chromosome Start Stop Links
2 201288655 201288781 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 2Link to Ensembl Genome Browser on chromosome 2
2 201289457 201289566 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 2Link to Ensembl Genome Browser on chromosome 2
2 201289696 201289785 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 2Link to Ensembl Genome Browser on chromosome 2
2 201299238 201299300 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 2Link to Ensembl Genome Browser on chromosome 2
2 201307519 201307622 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 2Link to Ensembl Genome Browser on chromosome 2
2 201309151 201309250 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 2Link to Ensembl Genome Browser on chromosome 2
2 201330470 201330522 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 2Link to Ensembl Genome Browser on chromosome 2
2 201330736 201330833 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 2Link to Ensembl Genome Browser on chromosome 2
2 201342370 201342431 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 2Link to Ensembl Genome Browser on chromosome 2
2 201344170 201344263 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 2Link to Ensembl Genome Browser on chromosome 2
2 201346542 201346675 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 2Link to Ensembl Genome Browser on chromosome 2
2 201348254 201348302 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 2Link to Ensembl Genome Browser on chromosome 2
2 201350711 201350782 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 2Link to Ensembl Genome Browser on chromosome 2
2 201351292 201351404 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 2Link to Ensembl Genome Browser on chromosome 2

CCDS Sequence Data
Blue highlighting indicates alternating exons.
Red highlighting indicates amino acids encoded across a splice junction.
 
Mouse over the nucleotide or protein sequence below and click on the highlighted codon or residue to select the pair.

Nucleotide Sequence (1269 nt):
ATGTACCCCAACCCTCTCATCTACTGCACCTGCTGGGACCCCTGGAACTTGGGACCACGGAAGCTAATCA
AGACCCCTCAACTACCACGCAAGAACTCCACAGGGAGTTCCAAGCTAACTCCTCTTGTACCAGCTCCAAA
AAATCACAATTACCTCCAACCAACAAAACCTGTTGTTTCCCCAAAAATGAAAATCCATTCAGCAAGGCAA
GAAGAGACTAATAAATCATTTTATGAAGTGATCAACGTGTCACCTGGCTATCAACTTGTTCGGAATCGGG
AACAGATTTCTGTCACCTTAGGGGATGAGATGTTTGATAGGAAAAAGCGGTGGGAATCGGAGATCCCGGA
CAAAGGCAGATTTTCCAGGACCAACATCATTTCTGACCTAGAAGAGCAAATCTCAGAGCTGACAGCAATA
ATTGAACAAATGAACAGAGACCACCAGTCTGCCCAGAAATTGCTCTCCAGTGAAATGGATCTCCGCTGTG
CTGAGATGAAACAGAACTTTGAAAACAAGAACAGGGAGCTCAAAGAGGCCCATGAAGCAGAACTCAGTGA
GTTGGAGAACAACTACAAAGCAGCCTTGAAGGCAGAGAAGTTGGCTGCCCAAGAGAAGCTAGAGGAGATG
GGAAAAGAATACAAGTATTTGAAGAATATGTTTCGTACGTATCAGGACAGTATTTATGATGAAATGGAAG
AGAAGTGGTCAAAACAGAAGGCGAAATGGAAGAAGGATGAGAAGTTCGAGCGAGAAAATATCCTGCTACA
GCAAAAAAAAAAGATGACCAAAAAATTCGAAATGGAGTCAGGAGAAGAAGATAAGAAAATAAATGAATCC
TGCAGTGCTGTCTTTGAGAACTTCATTCAAGAGAAGGAGGAGCTCTTGAAACAACATCAAAGTGACACCT
TGCAATTAGAAGAGCTGAGAAAAACCAAAGAGGTCATGCAGGAAGAATTGCATGCACAAGCCCTTATCCT
AGAGTCACTGAACACAAACCTCTACTATACCCAGTTGGAACTCCAGAAAGAGAAAGCTATAGTGGGAAAT
CTGGAGAAAATGCTTCAAACCAAGTTTGCTGAAACTGAAGAAAAGTATAAGCACACCATACAGATCCTGA
CGGAAGAGAACATTCATCTGAAGCAAAAGATAATTTCTAAGAATGAAGAAATTTGTGAAGGATGTTCTGG
GAGATTGGCCTCTATTACTGTTTCTAAGGATGATTCTGACACTGTGCAAGATGGTAGCAAGAAAGGACAA
GAATCATAA

Translation (422 aa):
MYPNPLIYCTCWDPWNLGPRKLIKTPQLPRKNSTGSSKLTPLVPAPKNHNYLQPTKPVVSPKMKIHSARQ
EETNKSFYEVINVSPGYQLVRNREQISVTLGDEMFDRKKRWESEIPDKGRFSRTNIISDLEEQISELTAI
IEQMNRDHQSAQKLLSSEMDLRCAEMKQNFENKNRELKEAHEAELSELENNYKAALKAEKLAAQEKLEEM
GKEYKYLKNMFRTYQDSIYDEMEEKWSKQKAKWKKDEKFERENILLQQKKKMTKKFEMESGEEDKKINES
CSAVFENFIQEKEELLKQHQSDTLQLEELRKTKEVMQEELHAQALILESLNTNLYYTQLELQKEKAIVGN
LEKMLQTKFAETEEKYKHTIQILTEENIHLKQKIISKNEEICEGCSGRLASITVSKDDSDTVQDGSKKGQ
ES


Links Key
 Links to:   History report
  BLAST report
  Entrez Gene
  Nucleotide report
  Protein report
 Re-query CCDS DB by:   CCDS ID
  Gene ID
  Nucleotide ID
  Protein ID
 Genome Browser Links:   Ensembl Genome Browser
  NCBI Sequence Viewer
  UCSC Genome Browser
  VEGA Genome Browser

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