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Report for CCDS46181.1 (current version)

CCDS Status Species Chrom. Gene CCDS Release NCBI Annotation Release Ensembl Annotation Release Links
46181.1 Public Homo sapiens 19 NCR1 24 110 108 CCDS HistoryNCBI Gene:9437Re-query CCDS DB by CCDS ID:46181.1Re-query CCDS DB by GeneID:9437See the combined annotation on chromosome 19 in Sequence Viewer

Public since: CCDS release 6, NCBI annotation release 37.1, Ensembl annotation release 55

Review status: Reviewed (by RefSeq and Havana)

Sequence IDs included in CCDS 46181.1

Original Current Source Nucleotide ID Protein ID MANE Status in CCDS Seq. Status Links
Original member Current member EBI ENST00000594765.5 ENSP00000471986.1 Accepted alive Link to Ensembl Transcript Viewer:ENST00000594765.5Link to Ensembl Protein Viewer:ENSP00000471986.1Re-query CCDS DB by Nucleotide ID:ENST00000594765Re-query CCDS DB by Protein ID:ENSP00000471986
Original member Current member NCBI NM_001145457.3 NP_001138929.2 Accepted alive Link to Nucleotide Sequence:NM_001145457.3Link to Protein Sequence:NP_001138929.2Re-query CCDS DB by Nucleotide ID:NM_001145457Re-query CCDS DB by Protein ID:NP_001138929Link to BLAST:NP_001138929.2

RefSeq Length Related UniProtKB/SwissProt Length Identity Gaps Mismatches
NP_001138929.2 303 O76036-6 303 100% 0 0

Chromosomal Locations for CCDS 46181.1

Assembly GRCh38.p14 (GCF_000001405.40)

On '+' strand of Chromosome 19 (NC_000019.10)
Genome Browser links: Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 19Link to Ensembl Genome Browser on chromosome 19See the combined annotation on chromosome 19 in Sequence Viewer

Chromosome Start Stop Links
19 54906188 54906221 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 19Link to Ensembl Genome Browser on chromosome 19
19 54906299 54906334 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 19Link to Ensembl Genome Browser on chromosome 19
19 54906523 54906807 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 19Link to Ensembl Genome Browser on chromosome 19
19 54909245 54909523 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 19Link to Ensembl Genome Browser on chromosome 19
19 54910018 54910065 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 19Link to Ensembl Genome Browser on chromosome 19
19 54912171 54912218 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 19Link to Ensembl Genome Browser on chromosome 19
19 54912690 54912871 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 19Link to Ensembl Genome Browser on chromosome 19

CCDS Sequence Data
Blue highlighting indicates alternating exons.
Red highlighting indicates amino acids encoded across a splice junction.
 
Mouse over the nucleotide or protein sequence below and click on the highlighted codon or residue to select the pair.

Nucleotide Sequence (912 nt):
ATGTCTTCCACACTCCCTGCCCTGCTCTGCGTCGGGCTGTGTCTGAGTCAGAGGATCAGCGCCCAGCAGC
AGACTCTCCCAAAACCGTTCATCTGGGCCGAGCCCCATTTCATGGTTCCAAAGGAAAAGCAAGTGACCAT
CTGTTGCCAGGGAAATTATGGGGCTGTTGAATACCAGCTGCACTTTGAAGGAAGCCTTTTTGCCGTGGAC
AGACCAAAACCCCCTGAGCGGATTAACAAAGTCCAATTCTACATCCCGGACATGAACTCCCGCATGGCAG
GGCAATACAGCTGCATCTATCGGGTTGGGGAGCTCTGGTCAGAGCCCAGCAACTTGCTGGATCTGGTGGT
AACAGAAATGTATGACACACCCACCCTCTCGGTTCATCCTGGACCCGAAGTGATCTCGGGAGAGAAGGTG
ACCTTCTACTGCCGTCTAGACACTGCAACAAGCATGTTCTTACTGCTCAAGGAGGGAAGATCCAGCCACG
TACAGCGCGGATACGGGAAGGTCCAGGCGGAGTTCCCCCTGGGCCCTGTGACCACAGCCCACAGAGGGAC
ATACCGATGTTTTGGCTCCTATAACAACCATGCCTGGTCTTTCCCCAGTGAGCCAGTGAAGCTCCTGGTC
ACAGGCGACATTGAGAACACCAGCCTTGCACCTGAAGACCCCACCTTTCCTGACACTTGGGGCACCTACC
TTTTAACCACAGAGACGGGACTCCAGAAAGACCATGCCCTCTGGGATCACACTGCCCAGAATCTCCTTCG
GATGGGCCTGGCCTTTCTAGTCCTGGTGGCTCTAGTGTGGTTCCTGGTTGAAGACTGGCTCAGCAGGAAG
AGGACTAGAGAGCGAGCCAGCAGAGCTTCCACTTGGGAAGGCAGGAGAAGGCTGAACACACAGACTCTTT
GA

Translation (303 aa):
MSSTLPALLCVGLCLSQRISAQQQTLPKPFIWAEPHFMVPKEKQVTICCQGNYGAVEYQLHFEGSLFAVD
RPKPPERINKVQFYIPDMNSRMAGQYSCIYRVGELWSEPSNLLDLVVTEMYDTPTLSVHPGPEVISGEKV
TFYCRLDTATSMFLLLKEGRSSHVQRGYGKVQAEFPLGPVTTAHRGTYRCFGSYNNHAWSFPSEPVKLLV
TGDIENTSLAPEDPTFPDTWGTYLLTTETGLQKDHALWDHTAQNLLRMGLAFLVLVALVWFLVEDWLSRK
RTRERASRASTWEGRRRLNTQTL


Links Key
 Links to:   History report
  BLAST report
  Entrez Gene
  Nucleotide report
  Protein report
 Re-query CCDS DB by:   CCDS ID
  Gene ID
  Nucleotide ID
  Protein ID
 Genome Browser Links:   Ensembl Genome Browser
  NCBI Sequence Viewer
  UCSC Genome Browser
  VEGA Genome Browser

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