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Report for CCDS46171.1 (current version)

CCDS Status Species Chrom. Gene CCDS Release NCBI Annotation Release Ensembl Annotation Release Links
46171.1 Public Homo sapiens 19 ZNF765 24 110 108 CCDS HistoryNCBI Gene:91661Re-query CCDS DB by CCDS ID:46171.1Re-query CCDS DB by GeneID:91661See the combined annotation on chromosome 19 in Sequence Viewer

Public since: CCDS release 6, NCBI annotation release 37.1, Ensembl annotation release 55

Review status: Reviewed (by RefSeq and Havana)

Sequence IDs included in CCDS 46171.1

Original Current Source Nucleotide ID Protein ID MANE Status in CCDS Seq. Status Links
Original member Current member EBI ENST00000396408.8 ENSP00000379689.3 MANE Select Accepted alive Link to Ensembl Transcript Viewer:ENST00000396408.8Link to Ensembl Protein Viewer:ENSP00000379689.3Re-query CCDS DB by Nucleotide ID:ENST00000396408Re-query CCDS DB by Protein ID:ENSP00000379689
Original member Current member NCBI NM_001040185.3 NP_001035275.1 MANE Select Accepted alive Link to Nucleotide Sequence:NM_001040185.3Link to Protein Sequence:NP_001035275.1Re-query CCDS DB by Nucleotide ID:NM_001040185Re-query CCDS DB by Protein ID:NP_001035275Link to BLAST:NP_001035275.1

RefSeq Length Related UniProtKB/SwissProt Length Identity Gaps Mismatches
NP_001035275.1 523 Q7L2R6-1 523 100% 0 0

Chromosomal Locations for CCDS 46171.1

Assembly GRCh38.p14 (GCF_000001405.40)

On '+' strand of Chromosome 19 (NC_000019.10)
Genome Browser links: Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 19Link to Ensembl Genome Browser on chromosome 19See the combined annotation on chromosome 19 in Sequence Viewer

Chromosome Start Stop Links
19 53398016 53398030 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 19Link to Ensembl Genome Browser on chromosome 19
19 53402065 53402191 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 19Link to Ensembl Genome Browser on chromosome 19
19 53407698 53409127 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 19Link to Ensembl Genome Browser on chromosome 19

CCDS Sequence Data
Blue highlighting indicates alternating exons.
Red highlighting indicates amino acids encoded across a splice junction.
 
Mouse over the nucleotide or protein sequence below and click on the highlighted codon or residue to select the pair.

Nucleotide Sequence (1572 nt):
ATGGCTCTTCCTCAGGGTCTATTGACATTCAGGGATGTGGCCATAGAATTCTCTCAGGAGGAGTGGAAAT
GCCTGGACCCTGCTCAGAGGACTCTATACAGGGACGTGATGCTGGAGAATTATAGGAACCTGGTCTCCCT
GGATATCTCTTCCAAATGCATGATGAAGGAGTTCTCGTCAACAGCACAAGGCAATAGAGAAGTGTTCCAT
GCAGGGACATCTCAAAGACATGAAAGTCATCACAATGGAGATTTTTGTTTCCAGGATATTGATAAAGATA
TTCATGACATTGAGTTTCAGTGGCAAGAAGATGAAAGAAATGGCCATGAAGCACTCATGACAAAAATCAA
AAAGTTGACAGGTAGTACAGAGCGATATGATCAAAATTATGCTGGAAACAAGCCTGTTAAATATCAGCTT
GGATTCAGCTTTCATTCGCATCTGCCTGAACTGCACATATTTCACACTGAAGAGAAAATTGATAATCAAG
TTGTGAAGTCTATCCACGATGCTTCCTTGGTTTCAACAGCCCAAAGAATTTCTTGTAGGCCTGAAACCCA
TATTTCTAATGACTATGGGAATAATTTCCTGAATTCTTCATTATTCACACAAAAACAGGAAGTACATATG
AGGGAAAAATCTTTCCAATGCAATGACAGTGGCAAAGCCTATAATTGTAGCTCACTCTTAAGGAAACATC
AGTTAATCCATTTAGGAGAGAAACAATATAAATGCGATATATGTGGCAAGGTCTTTAATTCGAAGCGATA
CGTTGCACGCCATCGTAGATGTCACACTGGTGAGAAACCTTACAAGTGTAATGAGTGTGGCAAGACCTTC
AGTCAGACATATTACCTAACATGCCATCGTAGACTTCATACTGGAGAGAAACCTTACAAATGTGAAGAAT
GTGACAAAGCTTTCCATTTCAAATCAAAGCTTCAAATACATAGGAGAATTCATACTGGAGAGAAACCGTA
CAAGTGTAATGAGTGTGGCAAGACCTTTAGTCAGAAGTCGTACCTTACATGCCATCGTAGGCTTCATACT
GGAGAGAAACCTTACAAGTGTAATGAGTGTGGCAAGACCTTTAGTCGGAAGTCACATTTTACATGCCATC
ATAGAGTTCATACTGGAGAGAAACCTTACAAGTGTAATGAGTGTAGCAAGACCTTTAGTCACAAGTCATC
TCTTACATACCATCGTAGACTTCATACTGAAGAGAAACCTTACAAGTGTAATGAGTGTGGCAAGACCTTC
AATCAGCAGTTAACCCTTAACATTTGTAGACTTCATAGTGGAGAGAAACCTTACAAATGTGAAGAATGTG
ACAAAGCCTACAGTTTCAAATCAAACCTTGAAATACATCAGAAAATTCATACTGAAGAGAATCCTTACAA
GTGTAATGAGTGTGGCAAGACCTTCAGCCGGACGTCATCCCTTACATACCATCATAGACTTCATACTGGA
CAGAAACCTTACAAATGTGAAGATTGTGATGAAGCTTTCAGTTTCAAATCAAACCTTGAAAGACATAGGA
GAATTTATACTGGAGAGAAACTACACGTGTAA

Translation (523 aa):
MALPQGLLTFRDVAIEFSQEEWKCLDPAQRTLYRDVMLENYRNLVSLDISSKCMMKEFSSTAQGNREVFH
AGTSQRHESHHNGDFCFQDIDKDIHDIEFQWQEDERNGHEALMTKIKKLTGSTERYDQNYAGNKPVKYQL
GFSFHSHLPELHIFHTEEKIDNQVVKSIHDASLVSTAQRISCRPETHISNDYGNNFLNSSLFTQKQEVHM
REKSFQCNDSGKAYNCSSLLRKHQLIHLGEKQYKCDICGKVFNSKRYVARHRRCHTGEKPYKCNECGKTF
SQTYYLTCHRRLHTGEKPYKCEECDKAFHFKSKLQIHRRIHTGEKPYKCNECGKTFSQKSYLTCHRRLHT
GEKPYKCNECGKTFSRKSHFTCHHRVHTGEKPYKCNECSKTFSHKSSLTYHRRLHTEEKPYKCNECGKTF
NQQLTLNICRLHSGEKPYKCEECDKAYSFKSNLEIHQKIHTEENPYKCNECGKTFSRTSSLTYHHRLHTG
QKPYKCEDCDEAFSFKSNLERHRRIYTGEKLHV


Links Key
 Links to:   History report
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 Re-query CCDS DB by:   CCDS ID
  Gene ID
  Nucleotide ID
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 Genome Browser Links:   Ensembl Genome Browser
  NCBI Sequence Viewer
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