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Report for CCDS46114.1 (current version)

CCDS Status Species Chrom. Gene CCDS Release NCBI Annotation Release Ensembl Annotation Release Links
46114.1 Public Homo sapiens 19 RTN2 24 110 108 CCDS HistoryNCBI Gene:6253Re-query CCDS DB by CCDS ID:46114.1Re-query CCDS DB by GeneID:6253See the combined annotation on chromosome 19 in Sequence Viewer

Public since: CCDS release 6, NCBI annotation release 37.1, Ensembl annotation release 55

Review status: Reviewed (by RefSeq and Havana)

Sequence IDs included in CCDS 46114.1

Original Current Source Nucleotide ID Protein ID MANE Status in CCDS Seq. Status Links
Original member Current member EBI ENST00000430715.6 ENSP00000398178.1 Accepted alive Link to Ensembl Transcript Viewer:ENST00000430715.6Link to Ensembl Protein Viewer:ENSP00000398178.1Re-query CCDS DB by Nucleotide ID:ENST00000430715Re-query CCDS DB by Protein ID:ENSP00000398178
Original member Current member NCBI NM_206901.3 NP_996784.1 Accepted alive Link to Nucleotide Sequence:NM_206901.3Link to Protein Sequence:NP_996784.1Re-query CCDS DB by Nucleotide ID:NM_206901Re-query CCDS DB by Protein ID:NP_996784Link to BLAST:NP_996784.1

RefSeq Length Related UniProtKB/SwissProt Length Identity Gaps Mismatches
NP_996784.1 205 O75298-3 205 100% 0 0

Chromosomal Locations for CCDS 46114.1

Assembly GRCh38.p14 (GCF_000001405.40)

On '-' strand of Chromosome 19 (NC_000019.10)
Genome Browser links: Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 19Link to Ensembl Genome Browser on chromosome 19See the combined annotation on chromosome 19 in Sequence Viewer

Chromosome Start Stop Links
19 45485708 45485789 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 19Link to Ensembl Genome Browser on chromosome 19
19 45486055 45486113 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 19Link to Ensembl Genome Browser on chromosome 19
19 45488471 45488517 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 19Link to Ensembl Genome Browser on chromosome 19
19 45488637 45488706 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 19Link to Ensembl Genome Browser on chromosome 19
19 45488848 45488986 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 19Link to Ensembl Genome Browser on chromosome 19
19 45489346 45489553 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 19Link to Ensembl Genome Browser on chromosome 19
19 45493160 45493172 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 19Link to Ensembl Genome Browser on chromosome 19

CCDS Sequence Data
Blue highlighting indicates alternating exons.
Red highlighting indicates amino acids encoded across a splice junction.
 
Mouse over the nucleotide or protein sequence below and click on the highlighted codon or residue to select the pair.

Nucleotide Sequence (618 nt):
ATGGGGAGTAAAGTGGCGGACCTGCTGTACTGGAAGGACACGAGGACGTCAGGAGTGGTCTTCACAGGCC
TGATGGTCTCCCTCCTCTGCCTCCTGCACTTTAGCATCGTGTCCGTGGCCGCGCACTTGGCTCTGTTGCT
GCTCTGCGGCACCATCTCTCTCAGGGTTTACCGCAAAGTGCTGCAGGCCGTGCACCGGGGGGATGGAGCC
AACCCTTTCCAGGCCTACCTGGATGTGGACCTCACCCTGACTCGGGAGCAGACGGAACGTTTGTCCCACC
AGATCACCTCCCGCGTGGTCTCGGCGGCCACGCAGCTGCGGCACTTCTTCCTGGTAGAAGACCTCGTGGA
TTCCCTCAAGCTGGCCCTCCTCTTCTACATCTTGACCTTCGTGGGTGCCATCTTCAATGGTTTGACTCTT
CTCATTCTGGGAGTGATTGGTCTATTCACCATCCCCCTGCTGTACCGGCAGCACCAGGCTCAGATCGACC
AATATGTGGGGTTGGTGACCAATCAGTTGAGCCACATCAAAGCTAAGATCCGAGCTAAAATCCCAGGGAC
CGGAGCCCTGGCCTCTGCAGCAGCCGCAGTCTCCGGATCCAAAGCCAAAGCCGAATGA

Translation (205 aa):
MGSKVADLLYWKDTRTSGVVFTGLMVSLLCLLHFSIVSVAAHLALLLLCGTISLRVYRKVLQAVHRGDGA
NPFQAYLDVDLTLTREQTERLSHQITSRVVSAATQLRHFFLVEDLVDSLKLALLFYILTFVGAIFNGLTL
LILGVIGLFTIPLLYRQHQAQIDQYVGLVTNQLSHIKAKIRAKIPGTGALASAAAAVSGSKAKAE


Links Key
 Links to:   History report
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  Nucleotide report
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 Re-query CCDS DB by:   CCDS ID
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 Genome Browser Links:   Ensembl Genome Browser
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