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Report for CCDS46027.1 (current version)

CCDS Status Species Chrom. Gene CCDS Release NCBI Annotation Release Ensembl Annotation Release Links
46027.1 Public Homo sapiens 19 ZNF506 24 110 108 CCDS HistoryNCBI Gene:440515Re-query CCDS DB by CCDS ID:46027.1Re-query CCDS DB by GeneID:440515See the combined annotation on chromosome 19 in Sequence Viewer

Public since: CCDS release 6, NCBI annotation release 37.1, Ensembl annotation release 55

Review status: Reviewed (by RefSeq and Havana)

Sequence IDs included in CCDS 46027.1

Original Current Source Nucleotide ID Protein ID MANE Status in CCDS Seq. Status Links
Original member Current member EBI ENST00000450683.6 ENSP00000408892.1 Accepted alive Link to Ensembl Transcript Viewer:ENST00000450683.6Link to Ensembl Protein Viewer:ENSP00000408892.1Re-query CCDS DB by Nucleotide ID:ENST00000450683Re-query CCDS DB by Protein ID:ENSP00000408892
Original member Current member NCBI NM_001145404.2 NP_001138876.1 Accepted alive Link to Nucleotide Sequence:NM_001145404.2Link to Protein Sequence:NP_001138876.1Re-query CCDS DB by Nucleotide ID:NM_001145404Re-query CCDS DB by Protein ID:NP_001138876Link to BLAST:NP_001138876.1

RefSeq Length Related UniProtKB/SwissProt Length Identity Gaps Mismatches
NP_001138876.1 412 Q5JVG8-2 412 100% 0 0

Chromosomal Locations for CCDS 46027.1

Assembly GRCh38.p14 (GCF_000001405.40)

On '-' strand of Chromosome 19 (NC_000019.10)
Genome Browser links: Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 19Link to Ensembl Genome Browser on chromosome 19See the combined annotation on chromosome 19 in Sequence Viewer

Chromosome Start Stop Links
19 19794552 19795660 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 19Link to Ensembl Genome Browser on chromosome 19
19 19806942 19807068 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 19Link to Ensembl Genome Browser on chromosome 19
19 19821601 19821603 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 19Link to Ensembl Genome Browser on chromosome 19

CCDS Sequence Data
Blue highlighting indicates alternating exons.
Red highlighting indicates amino acids encoded across a splice junction.
 
Mouse over the nucleotide or protein sequence below and click on the highlighted codon or residue to select the pair.

Nucleotide Sequence (1239 nt):
ATGGGACCATTGCAATTTAGAGATGTGGCCATAGAATTCTCTCTGGAGGAGTGGCATTGCCTGGACGCTG
CACAGCGGAATCTATATAGGGATGTGATGTTAGAGAACTACAGAAACCTGATCTTCCTTGTTATGTATTC
TCATTTTGCCCAAGACCTTTGGTCAGAGCAGAGCATAAAAGATTCTTTCCAAAAAGTGATACTAAGAAGA
TATGAAAAATGTAGACATGACAATTTACAGTTAAAAAAAGGCTGTGAAAGTGTAGATGAGTGTCCAGTGC
ACAAAAGAGGTTATAATGGACTTAAACAATGTTTGGCAACTACCCAGAGAAAAATATTTCAATGTGATGA
ATATGTGAAATTCTTGCATAAATTTTCAAATTCAAACAAACATAAGATAAGAGATACTGGAAAAAAATCT
TTTAAATGTATAGAATATGGGAAAACTTTTAACCAGTCTTCAACCCGTACTACATATAAGAAAATTGATG
CTGGAGAGAAACGCTATAAATGTGAAGAATGTGGTAAAGCCTATAAGCAGTCCTCACACCTTACTACACA
TAAGAAAATTCATACTGGAGAGAAACCCTACAAATGTGAAGAATGTGGCAAAGCCTATAAGCAGTCCTGT
AACCTTACTACACATAAGATAATTCATACTGGAGAGAAACCCTACAGATGTAGAGAATGTGGCAAAGCTT
TTAACCACCCTGCAACCCTTTTTTCACATAAGAAAATTCATACTGGAGAGAAACCATACAAGTGTGATAA
ATGTGGCAAAGCCTTTATTTCATCCTCAACCCTTACTAAACATGAGATAATTCATACTGGAGAGAAACCC
TACAAATGTGAGGAATGTGGCAAAGCTTTTAACCGTTCCTCAAACCTTACTAAACATAAGAGAATTCATA
CTGGAGATGTACCCTACAAATGTGACGAATGTGGCAAAACCTTTACCTGGTACTCAAGCCTCTCTAAACA
TAAGAGAGCTCATACTGGAGAGAAACCCTACAAGTGTGAAGAATGTGGCAAAGCCTTTACTGCATTCTCA
ACTCTAACTGAACATAAGATAATTCATACTGGAGAGAAACCGTACAAATGTGAAGAATGTGGCAAAGCTT
TTAACTGGTCCTCAGCCCTTAATAAACATAAGAAAATTCATATTAGACAGAAACCCTGCATAGTGAAGAA
TGTGGAAAATCTTTTAAATGTTCCTCAACCCTTAATAAGCATAAGATAA

Translation (412 aa):
MGPLQFRDVAIEFSLEEWHCLDAAQRNLYRDVMLENYRNLIFLVMYSHFAQDLWSEQSIKDSFQKVILRR
YEKCRHDNLQLKKGCESVDECPVHKRGYNGLKQCLATTQRKIFQCDEYVKFLHKFSNSNKHKIRDTGKKS
FKCIEYGKTFNQSSTRTTYKKIDAGEKRYKCEECGKAYKQSSHLTTHKKIHTGEKPYKCEECGKAYKQSC
NLTTHKIIHTGEKPYRCRECGKAFNHPATLFSHKKIHTGEKPYKCDKCGKAFISSSTLTKHEIIHTGEKP
YKCEECGKAFNRSSNLTKHKRIHTGDVPYKCDECGKTFTWYSSLSKHKRAHTGEKPYKCEECGKAFTAFS
TLTEHKIIHTGEKPYKCEECGKAFNWSSALNKHKKIHIRQKPCIVKNVENLLNVPQPLISIR


Links Key
 Links to:   History report
  BLAST report
  Entrez Gene
  Nucleotide report
  Protein report
 Re-query CCDS DB by:   CCDS ID
  Gene ID
  Nucleotide ID
  Protein ID
 Genome Browser Links:   Ensembl Genome Browser
  NCBI Sequence Viewer
  UCSC Genome Browser
  VEGA Genome Browser

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