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Report for CCDS46005.1 (current version)

CCDS Status Species Chrom. Gene CCDS Release NCBI Annotation Release Ensembl Annotation Release Links
46005.1 Public Homo sapiens 19 AKAP8L 24 110 108 CCDS HistoryNCBI Gene:26993Re-query CCDS DB by CCDS ID:46005.1Re-query CCDS DB by GeneID:26993See the combined annotation on chromosome 19 in Sequence Viewer

Public since: CCDS release 6, NCBI annotation release 37.1, Ensembl annotation release 55

Review status: Reviewed (by RefSeq and Havana)

Sequence IDs included in CCDS 46005.1

Original Current Source Nucleotide ID Protein ID MANE Status in CCDS Seq. Status Links
Original member Current member EBI ENST00000397410.10 ENSP00000380557.3 MANE Select Accepted alive Link to Ensembl Transcript Viewer:ENST00000397410.10Link to Ensembl Protein Viewer:ENSP00000380557.3Re-query CCDS DB by Nucleotide ID:ENST00000397410Re-query CCDS DB by Protein ID:ENSP00000380557
Original member Current member NCBI NM_014371.4 NP_055186.3 MANE Select Accepted alive Link to Nucleotide Sequence:NM_014371.4Link to Protein Sequence:NP_055186.3Re-query CCDS DB by Nucleotide ID:NM_014371Re-query CCDS DB by Protein ID:NP_055186Link to BLAST:NP_055186.3

RefSeq Length Related UniProtKB/SwissProt Length Identity Gaps Mismatches
NP_055186.3 646 Q9ULX6-1 646 100% 0 0

Chromosomal Locations for CCDS 46005.1

Assembly GRCh38.p14 (GCF_000001405.40)

On '-' strand of Chromosome 19 (NC_000019.10)
Genome Browser links: Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 19Link to Ensembl Genome Browser on chromosome 19See the combined annotation on chromosome 19 in Sequence Viewer

Chromosome Start Stop Links
19 15380122 15380430 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 19Link to Ensembl Genome Browser on chromosome 19
19 15380517 15380612 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 19Link to Ensembl Genome Browser on chromosome 19
19 15397150 15397280 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 19Link to Ensembl Genome Browser on chromosome 19
19 15397520 15397625 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 19Link to Ensembl Genome Browser on chromosome 19
19 15397714 15397855 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 19Link to Ensembl Genome Browser on chromosome 19
19 15399302 15399410 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 19Link to Ensembl Genome Browser on chromosome 19
19 15400295 15400358 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 19Link to Ensembl Genome Browser on chromosome 19
19 15400794 15400864 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 19Link to Ensembl Genome Browser on chromosome 19
19 15400947 15401043 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 19Link to Ensembl Genome Browser on chromosome 19
19 15401150 15401603 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 19Link to Ensembl Genome Browser on chromosome 19
19 15403475 15403715 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 19Link to Ensembl Genome Browser on chromosome 19
19 15404010 15404042 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 19Link to Ensembl Genome Browser on chromosome 19
19 15410520 15410594 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 19Link to Ensembl Genome Browser on chromosome 19
19 15418911 15418923 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 19Link to Ensembl Genome Browser on chromosome 19

CCDS Sequence Data
Blue highlighting indicates alternating exons.
Red highlighting indicates amino acids encoded across a splice junction.
 
Mouse over the nucleotide or protein sequence below and click on the highlighted codon or residue to select the pair.

Nucleotide Sequence (1941 nt):
ATGAGCTACACAGGCTTTGTCCAGGGATCTGAAACCACTTTGCAGTCGACATACTCGGATACCAGCGCTC
AGCCCACCTGTGATTATGGATATGGAACTTGGAACTCTGGGACAAATAGAGGCTACGAGGGCTATGGCTA
TGGCTATGGCTATGGCCAGGATAACACCACCAACTATGGGTATGGTATGGCCACTTCACACTCTTGGGAA
ATGCCTAGCTCTGACACAAATGCAAACACTAGTGCCTCGGGTAGCGCCAGTGCCGATTCCGTTTTATCCA
GAATTAACCAGCGCTTAGATATGGTGCCGCATTTGGAGACAGACATGATGCAAGGAGGCGTGTACGGCTC
AGGTGGAGAAAGGTATGACTCTTATGAGTCCTGCGACTCGAGGGCCGTCCTGAGTGAGCGCGACCTGTAC
CGGTCAGGCTATGACTACAGCGAGCTTGACCCTGAGATGGAAATGGCCTATGAGGGCCAATACGATGCCT
ACCGCGACCAGTTCCGCATGCGTGGCAACGACACCTTCGGTCCCAGGGCACAGGGCTGGGCCCGGGATGC
CCGGAGCGGCCGGCCAATGGCCTCAGGCTATGGGCGCATGTGGGAAGACCCCATGGGGGCCCGGGGCCAG
TGCATGTCTGGTGCCTCTCGGCTGCCCTCCCTCTTCTCCCAGAACATCATCCCCGAGTACGGCATGTTCC
AGGGCATGCGAGGTGGGGGCGCCTTCCCGGGCGGCTCCCGCTTTGGTTTCGGGTTTGGCAATGGCATGAA
GCAGATGAGGCGGACCTGGAAGACCTGGACCACAGCCGACTTCCGAACCAAGAAGAAGAAGAGAAAGCAG
GGCGGCAGTCCTGATGAGCCAGATAGCAAAGCCACCCGCACGGACTGCTCGGACAACAGCGACTCAGACA
ATGATGAGGGCACCGAGGGGGAAGCCACAGAGGGCCTTGAAGGCACCGAGGCTGTGGAGAAGGGCTCCAG
AGTGGACGGAGAGGATGAGGAGGGAAAAGAGGATGGGAGAGAAGAAGGCAAAGAGGATCCAGAGAAGGGG
GCCCTAACCACCCAGGATGAAAATGGCCAGACCAAGCGCAAGTTGCAGGCAGGCAAGAAGAGTCAGGACA
AGCAGAAAAAGCGGCAGCGAGACCGCATGGTGGAAAGGATCCAGTTTGTGTGTTCTCTGTGCAAATACCG
GACCTTCTATGAGGACGAGATGGCCAGCCATCTTGACAGCAAGTTCCACAAGGAACACTTTAAGTACGTA
GGCACCAAGCTCCCTAAGCAGACGGCTGACTTTCTGCAGGAGTACGTCACTAACAAGACCAAGAAGACAG
AGGAGCTCCGAAAAACCGTGGAGGACCTTGATGGCCTCATCCAGCAAATCTACAGAGACCAGGATCTGAC
CCAGGAAATTGCCATGGAGCATTTTGTGAAGAAGGTGGAGGCAGCCCATTGTGCAGCCTGCGACCTCTTC
ATTCCCATGCAGTTTGGGATCATCCAGAAGCATCTGAAGACCATGGATCACAACCGGAACCGCAGGCTCA
TGATGGAGCAGTCCAAGAAGTCCTCCCTCATGGTGGCCCGCAGTATTCTCAACAACAAGCTCATCAGCAA
GAAGCTGGAGCGCTACCTGAAGGGCGAGAACCCTTTCACCGACAGCCCCGAGGAGGAGAAGGAGCAGGAG
GAGGCTGAGGGCGGTGCCCTGGACGAGGGGGCGCAGGGCGAAGCGGCAGGGATCTCGGAGGGCGCAGAGG
GCGTGCCGGCGCAGCCTCCCGTGCCCCCAGAGCCAGCCCCCGGGGCCGTGTCGCCGCCACCGCCGCCGCC
CCCAGAGGAGGAGGAGGAGGGCGCCGTGCCCTTGCTGGGAGGGGCGCTGCAACGCCAGATCCGCGGCATC
CCGGGCCTCGACGTGGAGGACGACGAGGAGGGCGGCGGGGGCGCCCCGTGA

Translation (646 aa):
MSYTGFVQGSETTLQSTYSDTSAQPTCDYGYGTWNSGTNRGYEGYGYGYGYGQDNTTNYGYGMATSHSWE
MPSSDTNANTSASGSASADSVLSRINQRLDMVPHLETDMMQGGVYGSGGERYDSYESCDSRAVLSERDLY
RSGYDYSELDPEMEMAYEGQYDAYRDQFRMRGNDTFGPRAQGWARDARSGRPMASGYGRMWEDPMGARGQ
CMSGASRLPSLFSQNIIPEYGMFQGMRGGGAFPGGSRFGFGFGNGMKQMRRTWKTWTTADFRTKKKKRKQ
GGSPDEPDSKATRTDCSDNSDSDNDEGTEGEATEGLEGTEAVEKGSRVDGEDEEGKEDGREEGKEDPEKG
ALTTQDENGQTKRKLQAGKKSQDKQKKRQRDRMVERIQFVCSLCKYRTFYEDEMASHLDSKFHKEHFKYV
GTKLPKQTADFLQEYVTNKTKKTEELRKTVEDLDGLIQQIYRDQDLTQEIAMEHFVKKVEAAHCAACDLF
IPMQFGIIQKHLKTMDHNRNRRLMMEQSKKSSLMVARSILNNKLISKKLERYLKGENPFTDSPEEEKEQE
EAEGGALDEGAQGEAAGISEGAEGVPAQPPVPPEPAPGAVSPPPPPPPEEEEEGAVPLLGGALQRQIRGI
PGLDVEDDEEGGGGAP


Links Key
 Links to:   History report
  BLAST report
  Entrez Gene
  Nucleotide report
  Protein report
 Re-query CCDS DB by:   CCDS ID
  Gene ID
  Nucleotide ID
  Protein ID
 Genome Browser Links:   Ensembl Genome Browser
  NCBI Sequence Viewer
  UCSC Genome Browser
  VEGA Genome Browser

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