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Report for CCDS45847.1 (current version)

CCDS Status Species Chrom. Gene CCDS Release NCBI Annotation Release Ensembl Annotation Release Links
45847.1 Public Homo sapiens 18 ASXL3 24 110 108 CCDS HistoryNCBI Gene:80816Re-query CCDS DB by CCDS ID:45847.1Re-query CCDS DB by GeneID:80816See the combined annotation on chromosome 18 in Sequence Viewer

Public since: CCDS release 6, NCBI annotation release 37.1, Ensembl annotation release 55

Review status: Reviewed (by RefSeq and Havana)

Sequence IDs included in CCDS 45847.1

Original Current Source Nucleotide ID Protein ID MANE Status in CCDS Seq. Status Links
Original member Current member EBI ENST00000269197.12 ENSP00000269197.4 MANE Select Accepted alive Link to Ensembl Transcript Viewer:ENST00000269197.12Link to Ensembl Protein Viewer:ENSP00000269197.4Re-query CCDS DB by Nucleotide ID:ENST00000269197Re-query CCDS DB by Protein ID:ENSP00000269197
Original member Current member NCBI NM_030632.3 NP_085135.1 MANE Select Accepted alive Link to Nucleotide Sequence:NM_030632.3Link to Protein Sequence:NP_085135.1Re-query CCDS DB by Nucleotide ID:NM_030632Re-query CCDS DB by Protein ID:NP_085135Link to BLAST:NP_085135.1

RefSeq Length Related UniProtKB/SwissProt Length Identity Gaps Mismatches
NP_085135.1 2248 Q9C0F0-1 2248 100% 0 0

Chromosomal Locations for CCDS 45847.1

Assembly GRCh38.p14 (GCF_000001405.40)

On '+' strand of Chromosome 18 (NC_000018.10)
Genome Browser links: Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 18Link to Ensembl Genome Browser on chromosome 18See the combined annotation on chromosome 18 in Sequence Viewer

Chromosome Start Stop Links
18 33578632 33578685 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 18Link to Ensembl Genome Browser on chromosome 18
18 33607594 33607676 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 18Link to Ensembl Genome Browser on chromosome 18
18 33644894 33645002 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 18Link to Ensembl Genome Browser on chromosome 18
18 33646245 33646353 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 18Link to Ensembl Genome Browser on chromosome 18
18 33661616 33661737 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 18Link to Ensembl Genome Browser on chromosome 18
18 33670673 33670790 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 18Link to Ensembl Genome Browser on chromosome 18
18 33671747 33671866 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 18Link to Ensembl Genome Browser on chromosome 18
18 33683405 33683568 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 18Link to Ensembl Genome Browser on chromosome 18
18 33731968 33732064 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 18Link to Ensembl Genome Browser on chromosome 18
18 33734310 33734415 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 18Link to Ensembl Genome Browser on chromosome 18
18 33738487 33740443 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 18Link to Ensembl Genome Browser on chromosome 18
18 33742888 33746595 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 18Link to Ensembl Genome Browser on chromosome 18

CCDS Sequence Data
Blue highlighting indicates alternating exons.
Red highlighting indicates amino acids encoded across a splice junction.
 
Mouse over the nucleotide or protein sequence below and click on the highlighted codon or residue to select the pair.

Nucleotide Sequence (6747 nt):
ATGAAAGACAAGAGGAAGAAGAAGGACCGCACCTGGGCCGAGGCTGCCCGCCTGGCACTAGAAAAACACC
CCAACTCACCAATGACAGCAAAGCAGATATTGGAAGTCATTCAGAAAGAAGGGTTAAAAGAAACAAGTGG
AACCTCTCCATTAGCCTGTCTGAATGCAATGCTTCACACTAACACTCGAATAGGGGATGGAACATTCTTC
AAAATCCCTGGAAAGTCAGGCCTCTATGCTCTCAAAAAAGAGGAGTCGTCATGCCCAGCAGATGGCACGT
TGGATTTAGTCTGTGAATCTGAATTGGATGGTACAGATATGGCCGAGGCAAATGCCCATGGAGAAGAAAA
TGGAGTTTGTTCGAAGCAGGTAACTGATGAAGCATCTTCCACTCGAGATTCAAGCCTTACTAACACAGCA
GTGCAAAGCAAGTTAGTGTCTTCCTTCCAGCAGCACACCAAAAAGGCTCTTAAACAGGCTTTGAGGCAGC
AGCAGAAAAGAAGAAATGGAGTCTCAATGATGGTAAACAAGACTGTTCCTCGTGTTGTTTTGACACCATT
AAAGGTGTCTGATGAGCAGTCGGATTCGCCTTCAGGATCTGAATCTAAAAATGGTGAAGCAGACAGTTCA
GATAAAGAAATGAAACATGGGCAAAAATCTCCCACTGGAAAACAAACAAGTCAGCACTTAAAACGATTAA
AAAAGTCTGGTTTAGGGCACTTGAAATGGACCAAAGCTGAGGACATTGACATAGAAACCCCAGGATCTAT
TCTTGTCAACACTAACTTGAGGGCATTAATAAATAAACATACGTTTGCTTCCTTACCTCAGCATTTTCAA
CAATACCTCCTGCTTTTGCTCCCAGAAGTGGATAGGCAGATGGGAAGTGATGGAATTTTACGCCTCAGTA
CTTCAGCTCTAAATAATGAATTCTTTGCATATGCAGCACAAGGGTGGAAACAGCGACTGGCAGAAGGAGA
GTTTACCCCAGAAATGCAGTTGCGGATAAGGCAAGAAATTGAGAAGGAAAAGAAAACAGAACCTTGGAAA
GAAAAATTCTTTGAGAGGTTTTATGGAGAAAAGCTGGGCATGTCAAGAGAGGAATCTGTGAAGCTCACTA
CTGGACCAAACAACGCTGGAGCTCAAAGTAGTTCTTCATGTGGGACTTCTGGCCTTCCAGTTTCTGCACA
GACAGCCTTGGCAGAACAACAGCCAAAAAGCATGAAAAGCCCAGCTTCTCCAGAGCCTGGTTTCTGTGCT
ACTCTTTGCCCTATGGTAGAAATTCCACCTAAAGATATAATGGCAGAATTGGAGTCAGAGGATATCTTGA
TCCCTGAAGAATCTGTAATTCAGGAGGAAATTGCAGAAGAGGTAGAGACTAGTATCTGTGAATGCCAGGA
TGAAAATCATAAGACAATACCTGAATTTTCTGAGGAGGCTGAAAGTCTAACCAATTCTCATGAAGAACCC
CAAATAGCACCTCCTGAAGATAACTTGGAATCCTGTGTTATGATGAATGATGTTTTAGAAACTTTGCCTC
ATATTGAAGTTAAGATAGAAGGGAAGTCAGAATCACCCCAGGAAGAAATGACAGTTGTTATCGATCAGTT
AGAAGTCTGTGACTCTCTTATTCCTTCCACTTCATCTATGACTCATGTCAGTGACACAGAACATAAGGAG
TCAGAAACTGCAGTAGAGACCAGTACCCCCAAAATAAAAACAGGGTCATCTTCTCTAGAAGGCCAGTTTC
CAAATGAAGGAATTGCTATAGATATGGAGCTACAGAGTGACCCTGAAGAACAGCTTTCAGAAAATGCCTG
CATCTCTGAAACGTCCTTTTCTTCTGAGAGCCCAGAGGGAGCCTGTACCAGCCTGCCTTCTCCAGGAGGG
GAAACACAGTCCACATCAGAAGAATCATGTACTCCAGCCTCCCTTGAGACAACATTTTGTTCTGAGGTAT
CTAGCACTGAAAATACAGACAAATACAACCAGAGAAATTCCACTGATGAAAACTTTCATGCATCTTTGAT
GTCAGAAATATCTCCAATATCCACTTCACCTGAAATATCAGAAGCATCTCTTATGTCCAACTTACCATTA
ACATCTGAAGCATCACCAGTATCCAACTTACCTTTAACATCAGAAACCTCACCGATGTCTGACTTACCTT
TAACATCAGAAACTTCTTCAGTGTCTTCCATGCTTCTCACCTCTGAGACCACTTTTGTATCCAGTTTGCC
ACTTCCTTCAGAAACATCTCCAATTTCCAACTCTTCCATAAATGAGAGAATGGCACATCAGCAAAGAAAG
TCACCTTCTGTATCTGAAGAGCCACTCTCCCCGCAGAAAGATGAGTCTTCCGCCACTGCCAAACCTCTGG
GAGAGAACCTTACCTCCCAGCAGAAGAATCTGTCTAATACTCCCGAACCCATCATAATGAGTTCTTCTTC
CATTGCTCCTGAAGCATTTCCGTCTGAAGATTTGCACAATAAGACCCTGAGTCAGCAAACCTGTAAATCA
CATGTTGACACTGAGAAGCCCTACCCTGCTTCAATTCCAGAACTTGCTTCTACTGAAATGATAAAAGTTA
AAAATCATAGCGTCCTGCAAAGAACAGAAAAAAAAGTGTTACCTTCACCATTGGAATTATCTGTCTTTTC
TGAAGGGACAGATAATAAGGGAAATGAGCTTCCATCTGCTAAATTACAGGACAAGCAATATATCTCATCA
GTGGATAAGGCTCCATTTTCAGAAGGCTCTAGAAATAAAACACATAAGCAAGGGAGTACACAGAGTCGGT
TAGAAACCTCACATACTTCCAAGTCATCAGAGCCCTCCAAGTCACCTGATGGGATAAGAAATGAAAGTAG
AGATTCAGAGATATCAAAGAGAAAAACTGCAGAGCAACACAGCTTTGGAATCTGTAAGGAAAAGAGAGCT
AGGATAGAAGATGATCAGTCAACCCGGAACATATCATCTAGCAGCCCACCTGAGAAAGAACAGCCTCCCA
GAGAGGAACCAAGGGTTCCCCCTCTCAAGATTCAGCTTTCCAAAATTGGGCCACCTTTTATAATCAAGAG
CCAACCAGTCTCCAAACCTGAGTCTCGAGCATCCACTAGCACATCTGTCAGTGGCGGGAGGAACACAGGA
GCCAGGACCCTCGCAGATATCAAGGCCCGGGCCCAACAAGCTCGGGCCCAGCGAGAGGCTGCTGCAGCTG
CTGCTGTGGCTGCTGCAGCGAGCATTGTCTCTGGAGCCATGGGAAGTCCAGGAGAGGGTGGAAAGACGAG
AACTCTGGCACACATCAAAGAGCAGACAAAGGCTAAGCTCTTTGCAAAGCATCAAGCTCGAGCCCATCTC
TTCCAGACCTCTAAAGAGACCCGGTTGCCTCCTCCGCTCAGCTCAAAGGAAGGGCCTCCAAACTTAGAAG
TCTCTTCTACCCCTGAAACAAAAATGGAAGGTTCGACTGGTGTCATTATTGTCAATCCAAACTGTAGATC
TCCTAGCAACAAGTCTGCCCACCTCCGGGAGACCACCACTGTACTACAGCAGTCTCTTAACCCAAGTAAA
CTTCCAGAAACTGCCACTGACTTATCTGTGCATAGTTCTGATGAAAACATACCTGTGTCACATTTATCTG
AGAAAATTGTTTCATCTACCTCTTCTGAAAATAGCAGTGTGCCCATGCTTTTTAATAAAAATTCTGTCCC
TGTATCTGTTTGCAGCACTGCTATATCGGGAGCAATTAAAGAACATCCCTTTGTGAGTTCTGTTGATAAA
TCCTCTGTCCTAATGTCTGTTGACAGTGCAAACACTACAATTTCTGCTTGTAATATAAGCATGTTAAAAA
CCATCCAGGGAACTGACACTCCATGCATAGCCATTATACCAAAATGTATTGAAAGCACTCCCATTTCAGC
CACTACAGAGGGCTCCAGCATATCAAGCTCCATGGATGATAAGCAGTTACTAATATCAAGCAGCAGTGCT
AGTAACTTAGTCTCCACTCAGTACACCTCTGTGCCAACTCCCTCCATCGGAAACAATTTGCCAAACCTCT
CCACTAGCTCTGTCTTGATTCCCCCAATGGGAATTAACAACAGATTTCCTTCTGAGAAGATAGCCATACC
TGGGAGTGAAGAACAGGCCACTGTATCCATGGGTACCACTGTGAGAGCAGCCCTCAGCTGCAGTGATTCT
GTAGCGGTCACAGACTCTCTGGTTGCACACCCGACCGTCGCAATGTTTACTGGAAACATGCTGACAATAA
ACTCTTATGATAGTCCTCCCAAGTTAAGTGCTGAAAGCTTGGACAAAAATTCAGGGCCTCGAAACAGGGC
AGATAATTCTGGAAAACCTCAGCAACCACCAGGGGGCTTTGCACCAGCAGCCATAAACCGATCAATTCCG
TGTAAAGTCATCGTTGACCACAGCACCACGCTGACCTCCAGTTTGTCTCTGACTGTCTCCGTTGAAAGCT
CAGAAGCCAGCTTGGACCTGCAGGGCAGACCAGTGAGGACAGAGGCATCCGTACAGCCCGTGGCGTGTCC
TCAGGTGTCTGTGATTAGCAGGCCTGAGCCAGTTGCCAACGAAGGTATAGATCACAGTTCCACTTTCATT
GCTGCTTCGGCAGCAAAACAAGACAGTAAAACATTGCCGGCCACCTGCACAAGTCTCCGAGAATTACCCC
TTGTTCCAGATAAATTAAATGAGCCGACTGCTCCCAGTCATAACTTTGCTGAGCAGGCACGTGGCCCAGC
TCCTTTCAAAAGTGAAGCAGACACAACCTGTAGCAATCAGTATAACCCAAGTAACCGGATTTGCTGGAAT
GATGATGGGATGAGGAGCACAGGACAGCCTCTGGTTACTCACTCGGGTTCAAGTAAACAAAAAGAATATC
TAGAGCAAAGCTGTCCAAAGGCTATCAAAACTGAACATGCCAACTACTTGAACGTGTCAGAACTTCATCC
CAGGAATCTTGTAACAAATGTTGCTCTTCCTGTGAAATCTGAACTTCACGAAGCAGACAAGGGCTTTAGA
ATGGACACTGAAGACTTCCCTGGCCCTGAGCTGCCTCCTCCGGCTGCAGAGGGAGCCTCTAGTGTACAAC
AAACACAGAACATGAAAGCTTCCACCTCAAGTCCCATGGAAGAGGCTATTTCCTTGGCTACCGATGCCCT
GAAGAGAGTCCCTGGTGCAGGGAGCTCAGGCTGTCGTCTGTCCTCTGTGGAGGCTAACAATCCGCTGGTG
ACGCAGTTACTACAGGGCAACCTGCCTTTGGAAAAAGTGTTGCCACAGCCCAGATTGGGAGCCAAGCTTG
AAATCAACAGGCTTCCATTGCCTCTTCAAACTACCTCAGTGGGTAAAACAGCACCAGAGAGAAACGTTGA
AATTCCGCCCAGCTCTCCAAATCCAGATGGTAAGGGCTACTTGGCAGGGACTCTGGCACCACTCCAAATG
AGAAAGCGAGAAAACCACCCCAAAAAGAGAGTAGCTAGGACTGTAGGAGAACACACTCAAGTTAAATGTG
AACCAGGAAAATTGTTGGTGGAGCCAGATGTTAAAGGGGTGCCTTGTGTCATCAGTTCCGGCATCAGTCA
GCTAGGACACAGCCAGCCATTTAAGCAAGAATGGCTAAACAAGCACTCCATGCAGAACAGAATTGTTCAC
AGCCCTGAGGTCAAACAGCAAAAGCGGCTGCTCCCCTCGTGTAGCTTCCAGCAGAACCTATTTCATGTTG
ACAAGAATGGCGGCTTCCACACTGACGCTGGTACCTCACACAGACAGCAGTTTTACCAAATGCCTGTGGC
TGCCAGGGGCCCCATTCCTACTGCAGCTCTGTTACAGGCCTCTTCCAAGACCCCAGTGGGGTGTAATGCA
TTTGCCTTCAACAGGCATCTTGAACAGAAGGGATTGGGAGAGGTTAGTCTTTCCTCAGCACCTCACCAGC
TAAGGTTAGCCAACATGTTATCCCCCAATATGCCCATGAAAGAAGGTGATGAGGTGGGAGGCACTGCACA
CACAATGCCAAACAAAGCACTAGTACATCCGCCGCCGCCACCGCCTCCCCCTCCCCCTCCACCCTTGGCT
TTGCCCCCGCCTCCCCCCCCACCACCTCCGCTACCTCCACCTCTCCCTAATGCAGAAGTCCCATCTGATC
AAAAACAACCTCCAGTTACCATGGAAACCACTAAGAGACTTAGTTGGCCACAGTCCACGGGCATATGTAG
CAATATAAAATCGGAACCTCTTTCTTTTGAGGAAGGTTTAAGCAGCAGCTGTGAACTGGGCATGAAACAA
GTTTCCTATGACCAGAATGAAATGAAAGAACAGTTAAAAGCATTCGCGCTAAAAAGTGCAGATTTCTCTT
CCTATTTGCTTTCTGAGCCACAAAAGCCTTTTACCCAATTAGCTGCTCAGAAAATGCAGGTGCAGCAACA
ACAGCAGCTCTGTGGAAATTATCCAACAATACACTTTGGTAGCACGAGTTTCAAAAGGGCAGCATCTGCA
ATTGAAAAGTCCATTGGGATTTTGGGAAGTGGCTCCAATCCTGCCACAGGCTTGTCTGGTCAGAACGCTC
AGATGCCCGTTCAGAACTTTGCCGACAGCAGCAATGCAGATGAATTGGAACTGAAATGCTCTTGCCGGCT
GAAAGCCATGATTGTGTGCAAAGGCTGTGGGGCCTTCTGCCATGACGACTGCATAGGTCCTTCAAAACTT
TGTGTAGCATGCCTGGTTGTACGATAA

Translation (2248 aa):
MKDKRKKKDRTWAEAARLALEKHPNSPMTAKQILEVIQKEGLKETSGTSPLACLNAMLHTNTRIGDGTFF
KIPGKSGLYALKKEESSCPADGTLDLVCESELDGTDMAEANAHGEENGVCSKQVTDEASSTRDSSLTNTA
VQSKLVSSFQQHTKKALKQALRQQQKRRNGVSMMVNKTVPRVVLTPLKVSDEQSDSPSGSESKNGEADSS
DKEMKHGQKSPTGKQTSQHLKRLKKSGLGHLKWTKAEDIDIETPGSILVNTNLRALINKHTFASLPQHFQ
QYLLLLLPEVDRQMGSDGILRLSTSALNNEFFAYAAQGWKQRLAEGEFTPEMQLRIRQEIEKEKKTEPWK
EKFFERFYGEKLGMSREESVKLTTGPNNAGAQSSSSCGTSGLPVSAQTALAEQQPKSMKSPASPEPGFCA
TLCPMVEIPPKDIMAELESEDILIPEESVIQEEIAEEVETSICECQDENHKTIPEFSEEAESLTNSHEEP
QIAPPEDNLESCVMMNDVLETLPHIEVKIEGKSESPQEEMTVVIDQLEVCDSLIPSTSSMTHVSDTEHKE
SETAVETSTPKIKTGSSSLEGQFPNEGIAIDMELQSDPEEQLSENACISETSFSSESPEGACTSLPSPGG
ETQSTSEESCTPASLETTFCSEVSSTENTDKYNQRNSTDENFHASLMSEISPISTSPEISEASLMSNLPL
TSEASPVSNLPLTSETSPMSDLPLTSETSSVSSMLLTSETTFVSSLPLPSETSPISNSSINERMAHQQRK
SPSVSEEPLSPQKDESSATAKPLGENLTSQQKNLSNTPEPIIMSSSSIAPEAFPSEDLHNKTLSQQTCKS
HVDTEKPYPASIPELASTEMIKVKNHSVLQRTEKKVLPSPLELSVFSEGTDNKGNELPSAKLQDKQYISS
VDKAPFSEGSRNKTHKQGSTQSRLETSHTSKSSEPSKSPDGIRNESRDSEISKRKTAEQHSFGICKEKRA
RIEDDQSTRNISSSSPPEKEQPPREEPRVPPLKIQLSKIGPPFIIKSQPVSKPESRASTSTSVSGGRNTG
ARTLADIKARAQQARAQREAAAAAAVAAAASIVSGAMGSPGEGGKTRTLAHIKEQTKAKLFAKHQARAHL
FQTSKETRLPPPLSSKEGPPNLEVSSTPETKMEGSTGVIIVNPNCRSPSNKSAHLRETTTVLQQSLNPSK
LPETATDLSVHSSDENIPVSHLSEKIVSSTSSENSSVPMLFNKNSVPVSVCSTAISGAIKEHPFVSSVDK
SSVLMSVDSANTTISACNISMLKTIQGTDTPCIAIIPKCIESTPISATTEGSSISSSMDDKQLLISSSSA
SNLVSTQYTSVPTPSIGNNLPNLSTSSVLIPPMGINNRFPSEKIAIPGSEEQATVSMGTTVRAALSCSDS
VAVTDSLVAHPTVAMFTGNMLTINSYDSPPKLSAESLDKNSGPRNRADNSGKPQQPPGGFAPAAINRSIP
CKVIVDHSTTLTSSLSLTVSVESSEASLDLQGRPVRTEASVQPVACPQVSVISRPEPVANEGIDHSSTFI
AASAAKQDSKTLPATCTSLRELPLVPDKLNEPTAPSHNFAEQARGPAPFKSEADTTCSNQYNPSNRICWN
DDGMRSTGQPLVTHSGSSKQKEYLEQSCPKAIKTEHANYLNVSELHPRNLVTNVALPVKSELHEADKGFR
MDTEDFPGPELPPPAAEGASSVQQTQNMKASTSSPMEEAISLATDALKRVPGAGSSGCRLSSVEANNPLV
TQLLQGNLPLEKVLPQPRLGAKLEINRLPLPLQTTSVGKTAPERNVEIPPSSPNPDGKGYLAGTLAPLQM
RKRENHPKKRVARTVGEHTQVKCEPGKLLVEPDVKGVPCVISSGISQLGHSQPFKQEWLNKHSMQNRIVH
SPEVKQQKRLLPSCSFQQNLFHVDKNGGFHTDAGTSHRQQFYQMPVAARGPIPTAALLQASSKTPVGCNA
FAFNRHLEQKGLGEVSLSSAPHQLRLANMLSPNMPMKEGDEVGGTAHTMPNKALVHPPPPPPPPPPPPLA
LPPPPPPPPPLPPPLPNAEVPSDQKQPPVTMETTKRLSWPQSTGICSNIKSEPLSFEEGLSSSCELGMKQ
VSYDQNEMKEQLKAFALKSADFSSYLLSEPQKPFTQLAAQKMQVQQQQQLCGNYPTIHFGSTSFKRAASA
IEKSIGILGSGSNPATGLSGQNAQMPVQNFADSSNADELELKCSCRLKAMIVCKGCGAFCHDDCIGPSKL
CVACLVVR


Links Key
 Links to:   History report
  BLAST report
  Entrez Gene
  Nucleotide report
  Protein report
 Re-query CCDS DB by:   CCDS ID
  Gene ID
  Nucleotide ID
  Protein ID
 Genome Browser Links:   Ensembl Genome Browser
  NCBI Sequence Viewer
  UCSC Genome Browser
  VEGA Genome Browser

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