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Report for CCDS45811.1 (current version)

CCDS Status Species Chrom. Gene CCDS Release NCBI Annotation Release Ensembl Annotation Release Links
45811.1 Public Homo sapiens 17 FSCN2 24 110 108 CCDS HistoryNCBI Gene:25794Re-query CCDS DB by CCDS ID:45811.1Re-query CCDS DB by GeneID:25794See the combined annotation on chromosome 17 in Sequence Viewer

Public since: CCDS release 6, NCBI annotation release 37.1, Ensembl annotation release 55

Review status: Reviewed (by RefSeq and Havana)

Sequence IDs included in CCDS 45811.1

Original Current Source Nucleotide ID Protein ID MANE Status in CCDS Seq. Status Links
Original member Current member EBI ENST00000417245.7 ENSP00000388716.2 MANE Select Accepted alive Link to Ensembl Transcript Viewer:ENST00000417245.7Link to Ensembl Protein Viewer:ENSP00000388716.2Re-query CCDS DB by Nucleotide ID:ENST00000417245Re-query CCDS DB by Protein ID:ENSP00000388716
Original member Current member NCBI NM_012418.4 NP_036550.1 MANE Select Accepted alive Link to Nucleotide Sequence:NM_012418.4Link to Protein Sequence:NP_036550.1Re-query CCDS DB by Nucleotide ID:NM_012418Re-query CCDS DB by Protein ID:NP_036550Link to BLAST:NP_036550.1

RefSeq Length Related UniProtKB/SwissProt Length Identity Gaps Mismatches
NP_036550.1 492 O14926-1 492 100% 0 0

Chromosomal Locations for CCDS 45811.1

Assembly GRCh38.p14 (GCF_000001405.40)

On '+' strand of Chromosome 17 (NC_000017.11)
Genome Browser links: Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 17Link to Ensembl Genome Browser on chromosome 17See the combined annotation on chromosome 17 in Sequence Viewer

Chromosome Start Stop Links
17 81528532 81529357 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 17Link to Ensembl Genome Browser on chromosome 17
17 81535052 81535208 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 17Link to Ensembl Genome Browser on chromosome 17
17 81536146 81536267 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 17Link to Ensembl Genome Browser on chromosome 17
17 81536622 81536789 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 17Link to Ensembl Genome Browser on chromosome 17
17 81536875 81537080 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 17Link to Ensembl Genome Browser on chromosome 17

CCDS Sequence Data
Blue highlighting indicates alternating exons.
Red highlighting indicates amino acids encoded across a splice junction.
 
Mouse over the nucleotide or protein sequence below and click on the highlighted codon or residue to select the pair.

Nucleotide Sequence (1479 nt):
ATGCCGACGAACGGCCTGCACCAGGTGCTGAAGATCCAGTTTGGCCTCGTCAACGACACTGACCGCTACC
TGACAGCTGAGAGCTTCGGCTTCAAGGTCAATGCCTCGGCACCCAGCCTCAAGAGGAAGCAGACCTGGGT
GCTGGAACCCGACCCAGGACAAGGCACGGCTGTGCTGCTCCGCAGCAGCCACCTGGGCCGCTACCTGTCG
GCAGAAGAGGACGGGCGCGTGGCCTGTGAGGCAGAGCAGCCGGGCCGTGACTGCCGCTTCCTGGTCCTGC
CGCAGCCAGATGGGCGCTGGGTGCTGCGGTCCGAGCCGCACGGCCGCTTCTTCGGAGGCACCGAGGACCA
GCTGTCCTGCTTCGCCACAGCCGTTTCCCCGGCCGAGCTGTGGACCGTGCACCTGGCCATCCACCCGCAG
GCCCACCTGCTGAGCGTGAGCCGGCGGCGCTACGTGCACCTGTGCCCGCGGGAGGACGAGATGGCCGCAG
ACGGAGACAAGCCCTGGGGCGTGGACGCCCTCCTCACCCTCATCTTCCGGAGCCGACGGTACTGCCTCAA
GTCCTGTGACAGCCGCTACCTGCGCAGCGACGGCCGTCTGGTCTGGGAGCCTGAGCCCCGTGCCTGCTAC
ACGCTGGAGTTCAAGGCGGGCAAGCTGGCCTTCAAGGACTGCGACGGCCACTACCTGGCACCCGTGGGGC
CCGCAGGCACCCTCAAGGCCGGCCGAAACACGCGACCTGGCAAGGATGAGCTCTTTGATCTGGAGGAGAG
TCACCCACAGGTGGTGCTGGTGGCTGCCAACCACCGCTACGTCTCTGTGCGGCAAGGGGTCAACGTCTCA
GCCAATCAGGATGATGAACTAGACCACGAGACCTTCCTGATGCAAATTGACCAGGAGACAAAGAAGTGCA
CCTTCTATTCCAGCACTGGGGGCTACTGGACCCTGGTCACCCATGGGGGCATTCACGCCACAGCCACACA
AGTTTCTGCCAACACCATGTTTGAGATGGAGTGGCGTGGCCGGCGGGTAGCACTCAAAGCCAGCAACGGG
CGCTACGTGTGCATGAAGAAGAATGGGCAGCTGGCGGCTATCAGCGATTTTGTCGGCAAGGACGAAGAGT
TCACCCTCAAGCTCATCAACCGGCCCATCCTGGTGCTGCGCGGCCTGGACGGCTTCGTCTGCCACCACCG
CGGCTCCAACCAGCTGGACACCAACCGCTCCGTCTACGACGTCTTCCACCTGAGCTTCAGCGACGGCGCC
TACCGGATCCGAGGCCGCGACGGAGGGTTCTGGTACACGGGCAGCCACGGCAGCGTGTGCAGCGACGGCG
AACGCGCCGAGGACTTCGTCTTCGAGTTCCGTGAGCGCGGCCGCCTGGCCATCCGCGCCCGGAGCGGCAA
GTACCTGCGCGGCGGCGCCTCGGGCCTGCTGCGGGCCGATGCCGACGCCCCGGCCGGGACCGCGCTTTGG
GAGTACTGA

Translation (492 aa):
MPTNGLHQVLKIQFGLVNDTDRYLTAESFGFKVNASAPSLKRKQTWVLEPDPGQGTAVLLRSSHLGRYLS
AEEDGRVACEAEQPGRDCRFLVLPQPDGRWVLRSEPHGRFFGGTEDQLSCFATAVSPAELWTVHLAIHPQ
AHLLSVSRRRYVHLCPREDEMAADGDKPWGVDALLTLIFRSRRYCLKSCDSRYLRSDGRLVWEPEPRACY
TLEFKAGKLAFKDCDGHYLAPVGPAGTLKAGRNTRPGKDELFDLEESHPQVVLVAANHRYVSVRQGVNVS
ANQDDELDHETFLMQIDQETKKCTFYSSTGGYWTLVTHGGIHATATQVSANTMFEMEWRGRRVALKASNG
RYVCMKKNGQLAAISDFVGKDEEFTLKLINRPILVLRGLDGFVCHHRGSNQLDTNRSVYDVFHLSFSDGA
YRIRGRDGGFWYTGSHGSVCSDGERAEDFVFEFRERGRLAIRARSGKYLRGGASGLLRADADAPAGTALW
EY


Links Key
 Links to:   History report
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 Re-query CCDS DB by:   CCDS ID
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 Genome Browser Links:   Ensembl Genome Browser
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