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Report for CCDS45709.2 (current version)

CCDS Status Species Chrom. Gene CCDS Release NCBI Annotation Release Ensembl Annotation Release Links
45709.2 Public Homo sapiens 17 KIF18B 24 110 108 CCDS HistoryNCBI Gene:146909Re-query CCDS DB by CCDS ID:45709.2Re-query CCDS DB by GeneID:146909See the combined annotation on chromosome 17 in Sequence Viewer

Public Note for CCDS 45709.1
The coding region has been updated to represent an alternative splicing pattern that is more supported by the available transcript data.

Public since: CCDS release 6, NCBI annotation release 37.1, Ensembl annotation release 55

Review status: Reviewed (by RefSeq, Havana and CCDS collaboration)

Sequence IDs included in CCDS 45709.2

Original Current Source Nucleotide ID Protein ID MANE Status in CCDS Seq. Status Links
Original member Current member EBI ENST00000593135.6 ENSP00000465992.1 MANE Select Accepted alive Link to Ensembl Transcript Viewer:ENST00000593135.6Link to Ensembl Protein Viewer:ENSP00000465992.1Re-query CCDS DB by Nucleotide ID:ENST00000593135Re-query CCDS DB by Protein ID:ENSP00000465992
Original member Current member NCBI NM_001265577.2 NP_001252506.1 MANE Select Accepted alive Link to Nucleotide Sequence:NM_001265577.2Link to Protein Sequence:NP_001252506.1Re-query CCDS DB by Nucleotide ID:NM_001265577Re-query CCDS DB by Protein ID:NP_001252506Link to BLAST:NP_001252506.1

RefSeq Length Related UniProtKB/SwissProt Length Identity Gaps Mismatches
NP_001252506.1 852 Q86Y91-5 852 100% 0 0

Chromosomal Locations for CCDS 45709.2

Assembly GRCh38.p14 (GCF_000001405.40)

On '-' strand of Chromosome 17 (NC_000017.11)
Genome Browser links: Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 17Link to Ensembl Genome Browser on chromosome 17See the combined annotation on chromosome 17 in Sequence Viewer

Chromosome Start Stop Links
17 44926080 44926186 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 17Link to Ensembl Genome Browser on chromosome 17
17 44926414 44926499 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 17Link to Ensembl Genome Browser on chromosome 17
17 44926989 44927078 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 17Link to Ensembl Genome Browser on chromosome 17
17 44928026 44928578 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 17Link to Ensembl Genome Browser on chromosome 17
17 44928819 44929024 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 17Link to Ensembl Genome Browser on chromosome 17
17 44931602 44931729 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 17Link to Ensembl Genome Browser on chromosome 17
17 44932056 44932206 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 17Link to Ensembl Genome Browser on chromosome 17
17 44932673 44932773 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 17Link to Ensembl Genome Browser on chromosome 17
17 44932912 44932986 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 17Link to Ensembl Genome Browser on chromosome 17
17 44933923 44934099 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 17Link to Ensembl Genome Browser on chromosome 17
17 44934233 44934430 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 17Link to Ensembl Genome Browser on chromosome 17
17 44934507 44934617 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 17Link to Ensembl Genome Browser on chromosome 17
17 44934831 44934935 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 17Link to Ensembl Genome Browser on chromosome 17
17 44935259 44935416 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 17Link to Ensembl Genome Browser on chromosome 17
17 44936032 44936344 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 17Link to Ensembl Genome Browser on chromosome 17

CCDS Sequence Data
Blue highlighting indicates alternating exons.
Red highlighting indicates amino acids encoded across a splice junction.
 
Mouse over the nucleotide or protein sequence below and click on the highlighted codon or residue to select the pair.

Nucleotide Sequence (2559 nt):
ATGGCAGTGGAGGACAGCACGCTGCAAGTAGTGGTACGGGTGCGGCCCCCCACCCCTCGGGAGCTGGACA
GTCAGCGGCGGCCAGTGGTTCAGGTGGTGGACGAGCGGGTGCTGGTGTTTAACCCTGAGGAGCCCGATGG
AGGGTTCCCTGGCCTGAAATGGGGTGGCACCCATGATGGCCCCAAGAAGAAGGGCAAAGACCTGACGTTT
GTCTTTGACCGGGTCTTTGGCGAGGCGGCCACCCAACAGGACGTGTTCCAGCACACCACGCACAGCGTCC
TGGACAGCTTCCTCCAGGGCTACAACTGCTCAGTGTTTGCCTACGGGGCCACCGGGGCTGGGAAGACACA
CACCATGCTGGGAAGGGAGGGGGACCCCGGCATCATGTACCTGACCACCGTGGAACTGTACAGGCGCCTG
GAGGCCCGCCAGCAGGAGAAGCACTTCGAGGTGCTCATCAGCTACCAGGAGGTGTATAATGAACAGATCC
ATGACCTCCTGGAGCCCAAGGGGCCCCTTGCCATCCGCGAGGACCCCGACAAGGGGGTGGTGGTGCAAGG
ACTTTCTTTCCACCAGCCAGCCTCAGCCGAGCAGCTGCTGGAGATACTGACCAGGGGGAACCGTAACCGC
ACGCAGCACCCCACTGATGCCAACGCGACTTCCTCCCGCTCCCATGCCATCTTCCAGATCTTTGTGAAGC
AGCAGGACCGGGTTCCAGGACTGACCCAGGCTGTCCAGGTGGCCAAGATGAGCCTGATTGACCTGGCTGG
CTCAGAGCGGGCATCCAGCACCCATGCGAAGGGGGAGCGGCTGCGGGAGGGGGCCAACATCAACCGCTCT
CTGCTGGCGCTCATCAACGTCCTCAATGCCTTGGCCGATGCAAAGGGCCGCAAGACCCATGTGCCCTACC
GGGACAGCAAACTGACCCGCCTGCTCAAAGACTCCCTCGGGGGCAACTGCCGCACAGTGATGATCGCTGC
CATCAGCCCCTCCAGCCTGACCTACGAGGACACGTACAACACCCTCAAATATGCCGACCGGGCCAAGGAG
ATCAGGCTCTCGCTGAAGAGCAATGTGACCAGCCTGGACTGTCACATCAGCCAGTATGCTACCATCTGCC
AACAGCTCCAGGCTGAGGTAGCCGCTCTGAGGAAGAAGCTCCAAGTGTATGAGGGGGGAGGCCAGCCCCC
ACCACAGGACCTCCCAGGATCTCCCAAGTCGGGACCACCACCAGAACACCAGCCCTGCACCCCAGAGCTC
CCTGCAGGGCCTAGAGCCCTTCAAGAGGAGAGTCTGGGGATGGAGGCCCAGGTGGAGAGGGCCATGGAAG
GGAACTCTTCAGACCAGGAGCAGTCCCCAGAGGATGAGGATGAAGGCCCAGCTGAGGAGGTTCCAACCCA
GATGCCAGAGCAGAACCCCACACATGCACTGCCAGAGTCCCCTCGCCTGACCCTGCAGCCCAAGCCAGTC
GTGGGCCACTTCTCAGCACGGGAACTGGATGGGGACCGTTCTAAGCAGTTGGCCCTAAAGGTGCTGTGCG
TTGCCCAGCGGCAGTACTCCCTGCTCCAAGCAGCCAACCTCCTGACGCCCGACATGATCACAGAGTTTGA
GACCCTACAGCAGCTGGTGCAAGAGGAAAAAATTGAGCCTGGGGCAGAGGCCTTGAGGACTTCAGGCCTG
GCCAGGGGGGCACCTCTGGCTCAGGAGCTGTGTTCAGAGTCAATCCCTGTGCCGTCTCCTCTCTGCCCAG
AGCCTCCAGGATACACTGGCCCTGTGACCCGGACTATGGCGAGGCGACTGAGTGGCCCCCTGCACACCCT
GGGAATCCCGCCTGGACCCAACTGCACCCCAGCCCAGGGGTCCCGATGGCCCATGGAGAAGAAGAGGAGG
AGACCAAGCGCCTTGGAGGCAGACAGTCCCATGGCCCCAAAGCGGGGCACCAAGCGCCAGCGCCAGTCCT
TCCTGCCCTGCCTAAGGAGAGGGTCTCTGCCTGACACCCAACCTTCACAGGGGCCCAGCACCCCCAAAGG
AGAAAGGGCCTCCTCCCCCTGCCATTCCCCTCGCGTTTGCCCAGCCACAGTCATCAAAAGCCGGGTGCCC
CTGGGCCCTTCCGCCATGCAGAACTGCTCCACCCCGCTGGCTCTGCCCACTCGAGACCTCAATGCCACCT
TTGATCTCTCTGAGGAGCCTCCCTCAAAGCCCAGTTTCCATGAATGCATTGGCTGGGACAAAATACCCCA
GGAGCTGAGCAGGCTGGACCAGCCCTTCATCCCCAGGGCACCTGTGCCCCTGTTCACCATGAAGGGCCCC
AAGCCAACATCTTCCCTCCCTGGGACCTCTGCCTGCAAGAAGAAGCGCGTTGCGAGTTCCTCAGTCTCCC
ATGGCCGCAGCCGCATCGCCCGCCTCCCCAGCAGCACTTTGAAGAGGCCAGCTGGGCCCCTTGTACTCCC
AGAGCTGCCCTTGAGTCCCCTGTGCCCTAGCAACCGGAGGAATGGAAAGGACCTCATCAGGGTGGGGAGA
GCACTCTCAGCAGGGAACGGCGTCACCAAGGTGTCCTGA

Translation (852 aa):
MAVEDSTLQVVVRVRPPTPRELDSQRRPVVQVVDERVLVFNPEEPDGGFPGLKWGGTHDGPKKKGKDLTF
VFDRVFGEAATQQDVFQHTTHSVLDSFLQGYNCSVFAYGATGAGKTHTMLGREGDPGIMYLTTVELYRRL
EARQQEKHFEVLISYQEVYNEQIHDLLEPKGPLAIREDPDKGVVVQGLSFHQPASAEQLLEILTRGNRNR
TQHPTDANATSSRSHAIFQIFVKQQDRVPGLTQAVQVAKMSLIDLAGSERASSTHAKGERLREGANINRS
LLALINVLNALADAKGRKTHVPYRDSKLTRLLKDSLGGNCRTVMIAAISPSSLTYEDTYNTLKYADRAKE
IRLSLKSNVTSLDCHISQYATICQQLQAEVAALRKKLQVYEGGGQPPPQDLPGSPKSGPPPEHQPCTPEL
PAGPRALQEESLGMEAQVERAMEGNSSDQEQSPEDEDEGPAEEVPTQMPEQNPTHALPESPRLTLQPKPV
VGHFSARELDGDRSKQLALKVLCVAQRQYSLLQAANLLTPDMITEFETLQQLVQEEKIEPGAEALRTSGL
ARGAPLAQELCSESIPVPSPLCPEPPGYTGPVTRTMARRLSGPLHTLGIPPGPNCTPAQGSRWPMEKKRR
RPSALEADSPMAPKRGTKRQRQSFLPCLRRGSLPDTQPSQGPSTPKGERASSPCHSPRVCPATVIKSRVP
LGPSAMQNCSTPLALPTRDLNATFDLSEEPPSKPSFHECIGWDKIPQELSRLDQPFIPRAPVPLFTMKGP
KPTSSLPGTSACKKKRVASSSVSHGRSRIARLPSSTLKRPAGPLVLPELPLSPLCPSNRRNGKDLIRVGR
ALSAGNGVTKVS


Links Key
 Links to:   History report
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 Re-query CCDS DB by:   CCDS ID
  Gene ID
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 Genome Browser Links:   Ensembl Genome Browser
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