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Report for CCDS45610.1 (current version)

CCDS Status Species Chrom. Gene CCDS Release NCBI Annotation Release Ensembl Annotation Release Links
45610.1 Public Homo sapiens 17 USP43 24 110 108 CCDS HistoryNCBI Gene:124739Re-query CCDS DB by CCDS ID:45610.1Re-query CCDS DB by GeneID:124739See the combined annotation on chromosome 17 in Sequence Viewer

Public since: CCDS release 6, NCBI annotation release 37.1, Ensembl annotation release 55

Review status: Reviewed (by RefSeq and Havana)

Sequence IDs included in CCDS 45610.1

Original Current Source Nucleotide ID Protein ID MANE Status in CCDS Seq. Status Links
Original member Current member EBI ENST00000285199.12 ENSP00000285199.6 MANE Select Accepted alive Link to Ensembl Transcript Viewer:ENST00000285199.12Link to Ensembl Protein Viewer:ENSP00000285199.6Re-query CCDS DB by Nucleotide ID:ENST00000285199Re-query CCDS DB by Protein ID:ENSP00000285199
Original member Current member NCBI NM_153210.5 NP_694942.3 MANE Select Accepted alive Link to Nucleotide Sequence:NM_153210.5Link to Protein Sequence:NP_694942.3Re-query CCDS DB by Nucleotide ID:NM_153210Re-query CCDS DB by Protein ID:NP_694942Link to BLAST:NP_694942.3

RefSeq Length Related UniProtKB/SwissProt Length Identity Gaps Mismatches
NP_694942.3 1123 Q70EL4-1 1123 100% 0 0

Chromosomal Locations for CCDS 45610.1

Assembly GRCh38.p14 (GCF_000001405.40)

On '+' strand of Chromosome 17 (NC_000017.11)
Genome Browser links: Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 17Link to Ensembl Genome Browser on chromosome 17See the combined annotation on chromosome 17 in Sequence Viewer

Chromosome Start Stop Links
17 9645633 9646136 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 17Link to Ensembl Genome Browser on chromosome 17
17 9656403 9656534 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 17Link to Ensembl Genome Browser on chromosome 17
17 9666648 9666751 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 17Link to Ensembl Genome Browser on chromosome 17
17 9674891 9674983 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 17Link to Ensembl Genome Browser on chromosome 17
17 9676746 9676881 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 17Link to Ensembl Genome Browser on chromosome 17
17 9680231 9680366 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 17Link to Ensembl Genome Browser on chromosome 17
17 9682823 9682958 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 17Link to Ensembl Genome Browser on chromosome 17
17 9686798 9686909 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 17Link to Ensembl Genome Browser on chromosome 17
17 9693127 9693230 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 17Link to Ensembl Genome Browser on chromosome 17
17 9700172 9700249 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 17Link to Ensembl Genome Browser on chromosome 17
17 9701119 9701245 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 17Link to Ensembl Genome Browser on chromosome 17
17 9701352 9701700 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 17Link to Ensembl Genome Browser on chromosome 17
17 9709956 9710114 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 17Link to Ensembl Genome Browser on chromosome 17
17 9711968 9712132 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 17Link to Ensembl Genome Browser on chromosome 17
17 9727954 9728990 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 17Link to Ensembl Genome Browser on chromosome 17

CCDS Sequence Data
Blue highlighting indicates alternating exons.
Red highlighting indicates amino acids encoded across a splice junction.
 
Mouse over the nucleotide or protein sequence below and click on the highlighted codon or residue to select the pair.

Nucleotide Sequence (3372 nt):
ATGGACCTGGGCCCCGGGGACGCGGCAGGAGGGGGACCGCTCGCGCCCCGGCCCCGCCGCCGCCGCTCCC
TGCGCCGCCTGTTCAGCCGCTTCCTGCTGGCGCTGGGCAGCCGCTCACGCCCCGGGGACTCACCGCCCCG
GCCCCAGCCGGGACACTGTGATGGCGACGGTGAGGGGGGCTTCGCCTGCGCCCCGGGCCCAGTTCCAGCG
GCCCCCGGGAGCCCCGGGGAGGAACGCCCGCCCGGACCCCAGCCCCAGCTCCAGCTCCCCGCCGGCGATG
GGGCGCGGCCGCCGGGCGCTCAGGGCTTGAAGAACCACGGCAACACCTGTTTCATGAACGCGGTGGTGCA
GTGTCTCAGCAACACCGACCTGCTGGCCGAGTTCCTGGCGCTGGGGCGCTACCGGGCGGCTCCGGGCCGC
GCCGAGGTCACCGAGCAGCTGGCGGCGCTGGTGCGCGCGCTCTGGACTCGCGAATACACGCCCCAACTTT
CCGCGGAGTTCAAGAATGCAGTTTCCAAGTACGGCTCTCAGTTCCAAGGCAATTCCCAGCACGACGCCCT
GGAATTCCTGCTCTGGTTGCTGGATCGTGTACATGAGGACCTGGAGGGTTCATCCCGAGGGCCGGTGTCG
GAGAAGCTTCCGCCTGAAGCCACTAAAACCTCTGAGAACTGCCTGTCACCATCAGCTCAGCTTCCTCTAG
GTCAAAGCTTTGTGCAAAGCCACTTTCAAGCACAATATAGATCTTCCTTGACTTGTCCCCACTGCCTGAA
ACAGAGCAACACCTTTGATCCTTTCCTGTGTGTGTCCCTACCTATCCCCTTGCGCCAGACGAGGTTCTTG
AGTGTCACCTTGGTCTTCCCCTCTAAGAGCCAGCGGTTCCTGCGGGTTGGCCTGGCCGTGCCGATCCTCA
GCACAGTGGCAGCCCTGAGGAAGATGGTTGCAGAGGAAGGAGGCGTCCCTGCAGATGAGGTGATCTTGGT
TGAACTGTATCCCAGTGGATTCCAGCGGTCTTTCTTTGATGAAGAGGACCTGAATACCATCGCAGAGGGA
GATAATGTGTATGCCTTTCAAGTTCCTCCCTCACCCAGCCAGGGGACTCTCTCAGCTCATCCACTGGGTC
TGTCGGCCTCCCCACGCCTGGCAGCCCGTGAGGGCCAGCGATTCTCCCTCTCTCTCCACAGTGAGAGCAA
GGTGCTAATCCTCTTCTGTAACTTGGTGGGGTCAGGGCAGCAGGCTAGCAGGTTTGGGCCACCCTTCCTG
ATAAGGGAAGACAGAGCTGTTTCCTGGGCCCAGCTCCAGCAGTCTATCCTCAGCAAGGTCCGCCATCTTA
TGAAGAGTGAGGCCCCTGTACAGAACCTGGGGTCTCTGTTCTCCATCCGTGTTGTGGGACTCTCTGTGGC
CTGCAGCTATTTGTCTCCGAAGGACAGTCGGCCCCTCTGTCACTGGGCAGTTGACAGGGTTTTGCATCTC
AGGAGGCCAGGAGGCCCTCCACATGTCAAGCTGGCGGTGGAGTGGGATAGCTCTGTCAAGGAGCGCCTGT
TCGGGAGCCTCCAGGAGGAGCGAGCGCAGGATGCCGACAGTGTGTGGCAGCAGCAGCAGGCGCATCAGCA
GCACAGCTGTACCTTGGATGAATGTTTTCAGTTCTACACCAAGGAGGAGCAGCTGGCCCAGGATGACGCC
TGGAAGTGTCCTCACTGCCAAGTCCTGCAGCAGGGGATGGTGAAGCTGAGTTTGTGGACGCTGCCTGACA
TCCTCATCATCCACCTCAAAAGGTTCTGCCAGGTGGGCGAGAGAAGAAACAAGCTCTCCACGCTGGTGAA
GTTTCCGCTCTCTGGACTCAACATGGCTCCCCATGTGGCCCAGAGAAGCACCAGCCCTGAGGCAGGACTG
GGCCCCTGGCCTTCCTGGAAGCAGCCGGACTGCCTGCCCACCAGTTACCCGCTGGACTTCCTGTACGACC
TGTATGCCGTCTGCAACCACCATGGCAACCTGCAAGGTGGGCATTACACAGCCTACTGCCGGAACTCTCT
GGATGGCCAGTGGTACAGTTATGATGACAGCACGGTGGAACCGCTTCGAGAAGATGAGGTCAACACCAGA
GGGGCTTATATCCTGTTCTATCAGAAGCGGAACAGCATCCCTCCCTGGTCAGCCAGCAGCTCCATGAGAG
GCTCTACCAGCTCCTCCCTGTCTGATCACTGGCTCTTACGGCTCGGGAGCCACGCTGGCAGCACAAGGGG
AAGCCTGCTGTCCTGGAGCTCTGCCCCCTGCCCCTCCCTGCCCCAGGTTCCTGACTCTCCCATCTTCACC
AACAGCCTCTGCAATCAGGAAAAGGGAGGGTTGGAGCCCAGGCGTTTGGTACGGGGCGTGAAAGGCAGAA
GCATTAGCATGAAGGCACCCACCACTTCCCGAGCCAAGCAGGGACCATTCAAGACCATGCCTCTGCGGTG
GTCCTTTGGATCCAAGGAGAAACCACCAGGTGCCTCCGTCGAGTTGGTGGAGTACTTGGAATCCAGACGA
AGACCTCGGTCCACGAGCCAGTCCATTGTGTCGCTGTTGACGGGCACTGCGGGTGAGGATGAGAAGTCAG
CATCGCCGAGGTCCAACGTCGCCCTTCCTGCTAACAGCGAAGATGGTGGGCGGGCCATTGAAAGAGGTCC
AGCCGGGGTGCCCTGTCCCTCGGCTCAACCCAACCACTGTCTGGCCCCTGGAAACTCAGATGGTCCAAAC
ACAGCAAGGAAACTCAAGGAAAATGCAGGGCAGGACATCAAGCTTCCCAGAAAGTTTGACCTGCCTCTCA
CTGTGATGCCTTCAGTGGAGCATGAGAAACCAGCTCGACCGGAGGGCCAGAAGGCCATGAACTGGAAGGA
GAGCTTCCAGATGGGAAGCAAAAGCAGCCCACCCTCCCCCTATATGGGATTCTCTGGAAACAGCAAAGAC
AGTCGCCGAGGCACCTCTGAGCTAGACAGACCCCTGCAGGGGACACTCACCCTTCTGAGGTCCGTGTTTC
GGAAGAAGGAGAACAGGAGGAATGAGAGGGCAGAGGTCTCTCCACAGGTGCCCCCCGTCTCCCTGGTGAG
TGGCGGGCTGAGCCCTGCCATGGACGGGCAGGCTCCAGGCTCACCTCCTGCCCTCAGGATCCCAGAGGGC
CTGGCCAGGGGCCTGGGCAGCCGGCTCGAGAGGGATGTCTGGTCAGCCCCCAGCTCTCTCCGCCTCCCTC
GTAAAGCCAGCAGGGCCCCGAGAGGCAGTGCACTGGGCATGTCACAAAGGACTGTTCCAGGGGAGCAGGC
TTCTTATGGCACCTTTCAGAGAGTCAAATATCACACTCTTTCTTTAGGTCGAAAGAAAACCTTACCGGAG
TCCAGCTTTTGA

Translation (1123 aa):
MDLGPGDAAGGGPLAPRPRRRRSLRRLFSRFLLALGSRSRPGDSPPRPQPGHCDGDGEGGFACAPGPVPA
APGSPGEERPPGPQPQLQLPAGDGARPPGAQGLKNHGNTCFMNAVVQCLSNTDLLAEFLALGRYRAAPGR
AEVTEQLAALVRALWTREYTPQLSAEFKNAVSKYGSQFQGNSQHDALEFLLWLLDRVHEDLEGSSRGPVS
EKLPPEATKTSENCLSPSAQLPLGQSFVQSHFQAQYRSSLTCPHCLKQSNTFDPFLCVSLPIPLRQTRFL
SVTLVFPSKSQRFLRVGLAVPILSTVAALRKMVAEEGGVPADEVILVELYPSGFQRSFFDEEDLNTIAEG
DNVYAFQVPPSPSQGTLSAHPLGLSASPRLAAREGQRFSLSLHSESKVLILFCNLVGSGQQASRFGPPFL
IREDRAVSWAQLQQSILSKVRHLMKSEAPVQNLGSLFSIRVVGLSVACSYLSPKDSRPLCHWAVDRVLHL
RRPGGPPHVKLAVEWDSSVKERLFGSLQEERAQDADSVWQQQQAHQQHSCTLDECFQFYTKEEQLAQDDA
WKCPHCQVLQQGMVKLSLWTLPDILIIHLKRFCQVGERRNKLSTLVKFPLSGLNMAPHVAQRSTSPEAGL
GPWPSWKQPDCLPTSYPLDFLYDLYAVCNHHGNLQGGHYTAYCRNSLDGQWYSYDDSTVEPLREDEVNTR
GAYILFYQKRNSIPPWSASSSMRGSTSSSLSDHWLLRLGSHAGSTRGSLLSWSSAPCPSLPQVPDSPIFT
NSLCNQEKGGLEPRRLVRGVKGRSISMKAPTTSRAKQGPFKTMPLRWSFGSKEKPPGASVELVEYLESRR
RPRSTSQSIVSLLTGTAGEDEKSASPRSNVALPANSEDGGRAIERGPAGVPCPSAQPNHCLAPGNSDGPN
TARKLKENAGQDIKLPRKFDLPLTVMPSVEHEKPARPEGQKAMNWKESFQMGSKSSPPSPYMGFSGNSKD
SRRGTSELDRPLQGTLTLLRSVFRKKENRRNERAEVSPQVPPVSLVSGGLSPAMDGQAPGSPPALRIPEG
LARGLGSRLERDVWSAPSSLRLPRKASRAPRGSALGMSQRTVPGEQASYGTFQRVKYHTLSLGRKKTLPE
SSF


Links Key
 Links to:   History report
  BLAST report
  Entrez Gene
  Nucleotide report
  Protein report
 Re-query CCDS DB by:   CCDS ID
  Gene ID
  Nucleotide ID
  Protein ID
 Genome Browser Links:   Ensembl Genome Browser
  NCBI Sequence Viewer
  UCSC Genome Browser
  VEGA Genome Browser

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