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Report for CCDS45608.1 (current version)

CCDS Status Species Chrom. Gene CCDS Release NCBI Annotation Release Ensembl Annotation Release Links
45608.1 Public Homo sapiens 17 RNF222 24 110 108 CCDS HistoryNCBI Gene:643904Re-query CCDS DB by CCDS ID:45608.1Re-query CCDS DB by GeneID:643904See the combined annotation on chromosome 17 in Sequence Viewer

Public since: CCDS release 6, NCBI annotation release 37.1, Ensembl annotation release 55

Review status: Reviewed (by RefSeq and Havana)

Sequence IDs included in CCDS 45608.1

Original Current Source Nucleotide ID Protein ID MANE Status in CCDS Seq. Status Links
Original member Current member EBI ENST00000344001.3 ENSP00000343799.3 Accepted alive Link to Ensembl Transcript Viewer:ENST00000344001.3Link to Ensembl Protein Viewer:ENSP00000343799.3Re-query CCDS DB by Nucleotide ID:ENST00000344001Re-query CCDS DB by Protein ID:ENSP00000343799
Original member Current member EBI ENST00000399398.3 ENSP00000382330.1 MANE Select Accepted alive Link to Ensembl Transcript Viewer:ENST00000399398.3Link to Ensembl Protein Viewer:ENSP00000382330.1Re-query CCDS DB by Nucleotide ID:ENST00000399398Re-query CCDS DB by Protein ID:ENSP00000382330
Original member Current member NCBI NM_001146684.3 NP_001140156.1 MANE Select Accepted alive Link to Nucleotide Sequence:NM_001146684.3Link to Protein Sequence:NP_001140156.1Re-query CCDS DB by Nucleotide ID:NM_001146684Re-query CCDS DB by Protein ID:NP_001140156Link to BLAST:NP_001140156.1

RefSeq Length Related UniProtKB/SwissProt Length Identity Gaps Mismatches
NP_001140156.1 220 A6NCQ9 220 100% 0 0

Chromosomal Locations for CCDS 45608.1

Assembly GRCh38.p14 (GCF_000001405.40)

On '-' strand of Chromosome 17 (NC_000017.11)
Genome Browser links: Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 17Link to Ensembl Genome Browser on chromosome 17See the combined annotation on chromosome 17 in Sequence Viewer

Chromosome Start Stop Links
17 8392799 8393461 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 17Link to Ensembl Genome Browser on chromosome 17

CCDS Sequence Data
Blue highlighting indicates alternating exons.
Red highlighting indicates amino acids encoded across a splice junction.
 
Mouse over the nucleotide or protein sequence below and click on the highlighted codon or residue to select the pair.

Nucleotide Sequence (663 nt):
ATGTCAGAAGGGGAGAGCAAGGACAGCTCGGGCAGTGAGTGCCCCGTGTGCTATGAGAAGTTCCGGGACC
TGGAGGGCGCCAGCCGGACGCTGAGCTGTGGCCATGTGTTCTGCCATGACTGCCTGGTCAAGTACCTGCT
GTCCACCCGCGTGGATGGGCAGGTCCAGAGGACCCTGGTCTGCCCCATCTGCCGCTACGTCACATTCCTC
AGCAAGAAGAGCTCCCGCTGGCCCTCCATGCTGGACAAGAGCTCCCAGACGCTGGCTGTGCCCGTGGGCC
TGCCCTCCGTGCCCCCACTGGACAGCCTGGGCCACACAAACCCCCTGGCCGCCTCCTCCCCTGCCTGGAG
GCCACCTCCAGGCCAGGCCAGGCCGCCAGGCAGCCCGGGCCAGAGCGCCCAGCTCCCCCTGGACCTGCTG
CCCAGCCTGCCCCGGGAGTCACAGATCTTTGTCATCAGCCGCCACGGGATGCCCCTGGGGGAGCAGGACA
GCGTGCTGCCCCGCCGCAGCCTGGCAGAGCTCTCGGAGGCCTCCCTGGCGCCCCGCTCCGCCCGCGCCTT
CTGCTGCCGATCGCGGGCCCTGCTGCTCATCACGCTCATCGCTGTGGTGGCCGTGGTGGCCGCCATCCTG
CCCTGGGTGCTGCTGGTGAGGAAGCAGGCGTGA

Translation (220 aa):
MSEGESKDSSGSECPVCYEKFRDLEGASRTLSCGHVFCHDCLVKYLLSTRVDGQVQRTLVCPICRYVTFL
SKKSSRWPSMLDKSSQTLAVPVGLPSVPPLDSLGHTNPLAASSPAWRPPPGQARPPGSPGQSAQLPLDLL
PSLPRESQIFVISRHGMPLGEQDSVLPRRSLAELSEASLAPRSARAFCCRSRALLLITLIAVVAVVAAIL
PWVLLVRKQA


Links Key
 Links to:   History report
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  Nucleotide report
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 Re-query CCDS DB by:   CCDS ID
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 Genome Browser Links:   Ensembl Genome Browser
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