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Report for CCDS45465.1 (current version)

CCDS Status Species Chrom. Gene CCDS Release NCBI Annotation Release Ensembl Annotation Release Links
45465.1 Public Homo sapiens 16 FBXL19 24 110 108 CCDS HistoryNCBI Gene:54620Re-query CCDS DB by CCDS ID:45465.1Re-query CCDS DB by GeneID:54620See the combined annotation on chromosome 16 in Sequence Viewer

Public since: CCDS release 6, NCBI annotation release 37.1, Ensembl annotation release 55

Review status: Reviewed (by RefSeq and Havana)

Sequence IDs included in CCDS 45465.1

Original Current Source Nucleotide ID Protein ID MANE Status in CCDS Seq. Status Links
Original member Current member EBI ENST00000562319.7 ENSP00000455529.2 Accepted alive Link to Ensembl Transcript Viewer:ENST00000562319.7Link to Ensembl Protein Viewer:ENSP00000455529.2Re-query CCDS DB by Nucleotide ID:ENST00000562319Re-query CCDS DB by Protein ID:ENSP00000455529
Original member Current member NCBI NM_001099784.3 NP_001093254.2 Accepted alive Link to Nucleotide Sequence:NM_001099784.3Link to Protein Sequence:NP_001093254.2Re-query CCDS DB by Nucleotide ID:NM_001099784Re-query CCDS DB by Protein ID:NP_001093254Link to BLAST:NP_001093254.2

RefSeq Length Related UniProtKB/SwissProt Length Identity Gaps Mismatches
NP_001093254.2 694 Q6PCT2-1 694 100% 0 0

Chromosomal Locations for CCDS 45465.1

Assembly GRCh38.p14 (GCF_000001405.40)

On '+' strand of Chromosome 16 (NC_000016.10)
Genome Browser links: Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 16Link to Ensembl Genome Browser on chromosome 16See the combined annotation on chromosome 16 in Sequence Viewer

Chromosome Start Stop Links
16 30924733 30924768 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 16Link to Ensembl Genome Browser on chromosome 16
16 30925731 30925931 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 16Link to Ensembl Genome Browser on chromosome 16
16 30927308 30927451 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 16Link to Ensembl Genome Browser on chromosome 16
16 30927573 30927659 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 16Link to Ensembl Genome Browser on chromosome 16
16 30927745 30927963 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 16Link to Ensembl Genome Browser on chromosome 16
16 30928467 30928628 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 16Link to Ensembl Genome Browser on chromosome 16
16 30930073 30930584 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 16Link to Ensembl Genome Browser on chromosome 16
16 30942116 30942279 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 16Link to Ensembl Genome Browser on chromosome 16
16 30942375 30942536 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 16Link to Ensembl Genome Browser on chromosome 16
16 30946730 30946948 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 16Link to Ensembl Genome Browser on chromosome 16
16 30947052 30947230 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 16Link to Ensembl Genome Browser on chromosome 16

CCDS Sequence Data
Blue highlighting indicates alternating exons.
Red highlighting indicates amino acids encoded across a splice junction.
 
Mouse over the nucleotide or protein sequence below and click on the highlighted codon or residue to select the pair.

Nucleotide Sequence (2085 nt):
ATGGGTATGAAAGTCCCCGGAAAGGGGGAATCTGGGCCCTCGGCGTTGCTGACGCCCCCAATGTCGTCGA
GCAGCCGGGGGCCGGGGGCCGGAGCGCGCCGACGCCGAACCCGCTGCCGCCGCTGCCGGGCCTGTGTGCG
AACTGAGTGCGGGGATTGCCACTTCTGCCGAGACATGAAGAAGTTCGGGGGGCCCGGGCGCATGAAGCAG
TCGTGCCTGCTCCGGCAGTGCACTGCCCCCGTGCTCCCACACACAGCTGTGTGCCTCTTGTGTGGGGAGG
CTGGGAAGGAGGACACGGTGGAGGGAGAGGAAGAGAAATTTGGTTTGAGCCTCATGGAGTGTACAATCTG
CAACGAGATCGTCCACCCCGGCTGCCTGAAGATGGGGAAGGCTGAGGGTGTCATCAATGCAGAGATCCCC
AACTGCTGGGAGTGCCCTCGCTGCACCCAGGAAGGCCGCACCAGCAAGGATTCAGGTGAGGGGCCTGGCC
GCCGTAGGGCCGACAACGGCGAGGAGGGCGCCAGCTTGGGGAGCGGATGGAAGCTGACAGAGGAGCCACC
GCTTCCACCGCCCCCGCCCAGGCGCAAGGGCCCCCTGCCTGCCGGGCCCCCCCCGGAGGACGTGCCTGGG
CCCCCCAAACGAAAGGAAAGGGAGGCAGGGAATGAGCCTCCCACCCCAAGGAAAAAGGTGAAAGGAGGCC
GAGAGAGGCACCTGAAGAAGGTGGGTGGAGACGCCTGCCTCCTCCGAGGATCGGACCCAGGCGGCCCGGG
CCTGCTGCCCCCCAGGGTTCTGAATCCGAGCCAGGCTTTCTCATCCTGCCACCCTGGGCTCCCTCCCGAG
AACTGGGAGAAACCAAAGCCGCCTTTGGCCTCTGCAGAGGGCCCAGCGGTGCCGTCCCCGTCCCCGCAGA
GGGAGAAGCTAGAGCGTTTCAAGCGGATGTGCCAGCTGCTGGAACGGGTGCCTGACACCTCCTCTTCCTC
CTCGGACTCAGACTCCGACTCCGACTCTTCGGGCACATCGCTGAGTGAGGACGAAGCCCCCGGCGAGGCC
CGGAATGGGCGACGGCCAGCCCGGGGCAGCTCTGGCGAGAAGGAGAACCGTGGGGGGCGGCGGGCTGTGC
GCCCTGGCAGTGGGGGGCCCCTACTCAGCTGGCCCCTGGGCCCAGCCCCACCACCCCGGCCTCCACAGCT
GGAGCGGCACGTGGTGCGGCCCCCGCCTCGAAGCCCTGAGCCCGACACACTCCCCTTGGCTGCTGGATCC
GACCACCCCCTGCCCCGGGCCGCCTGGCTTCGCGTCTTCCAGCACCTCGGGCCGCGGGAGCTGTGTATCT
GCATGCGAGTCTGCCGAACTTGGAGCCGCTGGTGCTATGACAAGCGTCTGTGGCCTCGAATGGACCTGAG
CCGGCGGAAGTCACTGACCCCGCCCATGCTCAGTGGTGTGGTTCGCCGCCAGCCCCGTGCCCTGGACCTC
AGCTGGACAGGTGTCTCCAAGAAGCAGCTCATGTGGCTTCTGAACCGACTACAAGGCCTGCAGGAGCTGG
TGCTCTCTGGCTGCTCCTGGCTCTCTGTCTCTGCCCTGGGCTCAGCCCCACTGCCAGCCCTGCGGCTCCT
GGACCTCCGCTGGATCGAGGATGTTAAAGACTCCCAGCTCCGGGAGTTGCTGCTGCCTCCACCAGACACC
AAACCAGGGCAAACAGAGAGCCGTGGTCGGCTGCAGGGGGTGGCAGAACTGCGTCTGGCAGGTTTGGAGC
TGACAGATGCCTCCCTGCGTCTCCTGCTGCGTCACGCACCCCAGCTGAGCGCCCTGGACCTGAGCCACTG
CGCCCACGTCGGGGACCCCAGTGTTCACCTCCTCACGGCCCCCACGTCCCCACTCCGCGAGACCCTGGTG
CACCTCAATCTTGCTGGTTGCCACCGCCTAACGGACCACTGCCTCCCGCTGTTCCGCCGCTGCCCTCGTC
TACGCCGCCTAGACCTGCGCTCCTGCCGCCAGCTCTCACCCGAAGCTTGTGCCCGGCTGGCAGCTGCCGG
GCCCCCTGGCCCCTTCCGCTGCCCTGAGGAGAAGCTGCTTCTCAAGGACAGCTAG

Translation (694 aa):
MGMKVPGKGESGPSALLTPPMSSSSRGPGAGARRRRTRCRRCRACVRTECGDCHFCRDMKKFGGPGRMKQ
SCLLRQCTAPVLPHTAVCLLCGEAGKEDTVEGEEEKFGLSLMECTICNEIVHPGCLKMGKAEGVINAEIP
NCWECPRCTQEGRTSKDSGEGPGRRRADNGEEGASLGSGWKLTEEPPLPPPPPRRKGPLPAGPPPEDVPG
PPKRKEREAGNEPPTPRKKVKGGRERHLKKVGGDACLLRGSDPGGPGLLPPRVLNPSQAFSSCHPGLPPE
NWEKPKPPLASAEGPAVPSPSPQREKLERFKRMCQLLERVPDTSSSSSDSDSDSDSSGTSLSEDEAPGEA
RNGRRPARGSSGEKENRGGRRAVRPGSGGPLLSWPLGPAPPPRPPQLERHVVRPPPRSPEPDTLPLAAGS
DHPLPRAAWLRVFQHLGPRELCICMRVCRTWSRWCYDKRLWPRMDLSRRKSLTPPMLSGVVRRQPRALDL
SWTGVSKKQLMWLLNRLQGLQELVLSGCSWLSVSALGSAPLPALRLLDLRWIEDVKDSQLRELLLPPPDT
KPGQTESRGRLQGVAELRLAGLELTDASLRLLLRHAPQLSALDLSHCAHVGDPSVHLLTAPTSPLRETLV
HLNLAGCHRLTDHCLPLFRRCPRLRRLDLRSCRQLSPEACARLAAAGPPGPFRCPEEKLLLKDS


Links Key
 Links to:   History report
  BLAST report
  Entrez Gene
  Nucleotide report
  Protein report
 Re-query CCDS DB by:   CCDS ID
  Gene ID
  Nucleotide ID
  Protein ID
 Genome Browser Links:   Ensembl Genome Browser
  NCBI Sequence Viewer
  UCSC Genome Browser
  VEGA Genome Browser

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