NCBI CCDS banner
PubMed Entrez Gene BLAST OMIM
  

CCDS
Home
FTP
Process
Releases & Statistics

Collaborators
EBI
HGNC
MGI
NCBI

Contact Us
email CCDS

Genome Displays

Ensembl
NCBI
UCSC
VEGA

Related Resources
Gene
HomoloGene
MANE
RefSeq


Report for CCDS45263.1 (current version)

CCDS Status Species Chrom. Gene CCDS Release NCBI Annotation Release Ensembl Annotation Release Links
45263.1 Public Homo sapiens 15 ATOSA 24 110 108 CCDS HistoryNCBI Gene:56204Re-query CCDS DB by CCDS ID:45263.1Re-query CCDS DB by GeneID:56204See the combined annotation on chromosome 15 in Sequence Viewer

Public since: CCDS release 6, NCBI annotation release 37.1, Ensembl annotation release 55

Review status: Reviewed (by RefSeq and Havana)

Sequence IDs included in CCDS 45263.1

Original Current Source Nucleotide ID Protein ID MANE Status in CCDS Seq. Status Links
Original member Current member EBI ENST00000261844.11 ENSP00000261844.7 Accepted alive Link to Ensembl Transcript Viewer:ENST00000261844.11Link to Ensembl Protein Viewer:ENSP00000261844.7Re-query CCDS DB by Nucleotide ID:ENST00000261844Re-query CCDS DB by Protein ID:ENSP00000261844
Original member Current member EBI ENST00000619572.5 ENSP00000484641.1 MANE Select Accepted alive Link to Ensembl Transcript Viewer:ENST00000619572.5Link to Ensembl Protein Viewer:ENSP00000484641.1Re-query CCDS DB by Nucleotide ID:ENST00000619572Re-query CCDS DB by Protein ID:ENSP00000484641
Original member Current member NCBI NM_001385013.1 NP_001371942.1 Accepted alive Link to Nucleotide Sequence:NM_001385013.1Link to Protein Sequence:NP_001371942.1Re-query CCDS DB by Nucleotide ID:NM_001385013Re-query CCDS DB by Protein ID:NP_001371942Link to BLAST:NP_001371942.1
Original member Current member NCBI NM_001385014.1 NP_001371943.1 Accepted alive Link to Nucleotide Sequence:NM_001385014.1Link to Protein Sequence:NP_001371943.1Re-query CCDS DB by Nucleotide ID:NM_001385014Re-query CCDS DB by Protein ID:NP_001371943Link to BLAST:NP_001371943.1
Original member Current member NCBI NM_001385015.1 NP_001371944.1 Accepted alive Link to Nucleotide Sequence:NM_001385015.1Link to Protein Sequence:NP_001371944.1Re-query CCDS DB by Nucleotide ID:NM_001385015Re-query CCDS DB by Protein ID:NP_001371944Link to BLAST:NP_001371944.1
Original member Current member NCBI NM_001385016.1 NP_001371945.1 MANE Select Accepted alive Link to Nucleotide Sequence:NM_001385016.1Link to Protein Sequence:NP_001371945.1Re-query CCDS DB by Nucleotide ID:NM_001385016Re-query CCDS DB by Protein ID:NP_001371945Link to BLAST:NP_001371945.1
Original member Current member NCBI NM_001385017.1 NP_001371946.1 Accepted alive Link to Nucleotide Sequence:NM_001385017.1Link to Protein Sequence:NP_001371946.1Re-query CCDS DB by Nucleotide ID:NM_001385017Re-query CCDS DB by Protein ID:NP_001371946Link to BLAST:NP_001371946.1
Original member Current member NCBI NM_001385018.1 NP_001371947.1 Accepted alive Link to Nucleotide Sequence:NM_001385018.1Link to Protein Sequence:NP_001371947.1Re-query CCDS DB by Nucleotide ID:NM_001385018Re-query CCDS DB by Protein ID:NP_001371947Link to BLAST:NP_001371947.1
Original member Current member NCBI NM_019600.4 NP_062546.2 Accepted alive Link to Nucleotide Sequence:NM_019600.4Link to Protein Sequence:NP_062546.2Re-query CCDS DB by Nucleotide ID:NM_019600Re-query CCDS DB by Protein ID:NP_062546Link to BLAST:NP_062546.2

RefSeq Length Related UniProtKB/SwissProt Length Identity Gaps Mismatches
NP_001371942.1 1076 Q32MH5-1 1076 100% 0 0
NP_001371943.1 1076 Q32MH5-1 1076 100% 0 0
NP_001371944.1 1076 Q32MH5-1 1076 100% 0 0
NP_001371945.1 1076 Q32MH5-1 1076 100% 0 0
NP_001371946.1 1076 Q32MH5-1 1076 100% 0 0
NP_001371947.1 1076 Q32MH5-1 1076 100% 0 0
NP_062546.2 1076 Q32MH5-1 1076 100% 0 0

Chromosomal Locations for CCDS 45263.1

Assembly GRCh38.p14 (GCF_000001405.40)

On '-' strand of Chromosome 15 (NC_000015.10)
Genome Browser links: Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 15Link to Ensembl Genome Browser on chromosome 15See the combined annotation on chromosome 15 in Sequence Viewer

Chromosome Start Stop Links
15 52582154 52582307 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 15Link to Ensembl Genome Browser on chromosome 15
15 52584745 52584944 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 15Link to Ensembl Genome Browser on chromosome 15
15 52587151 52587219 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 15Link to Ensembl Genome Browser on chromosome 15
15 52593578 52593736 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 15Link to Ensembl Genome Browser on chromosome 15
15 52600127 52600235 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 15Link to Ensembl Genome Browser on chromosome 15
15 52601086 52601165 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 15Link to Ensembl Genome Browser on chromosome 15
15 52605133 52605246 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 15Link to Ensembl Genome Browser on chromosome 15
15 52608568 52610383 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 15Link to Ensembl Genome Browser on chromosome 15
15 52611130 52611255 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 15Link to Ensembl Genome Browser on chromosome 15
15 52611575 52611777 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 15Link to Ensembl Genome Browser on chromosome 15
15 52613673 52613857 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 15Link to Ensembl Genome Browser on chromosome 15
15 52678006 52678021 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 15Link to Ensembl Genome Browser on chromosome 15

CCDS Sequence Data
Blue highlighting indicates alternating exons.
Red highlighting indicates amino acids encoded across a splice junction.
 
Mouse over the nucleotide or protein sequence below and click on the highlighted codon or residue to select the pair.

Nucleotide Sequence (3231 nt):
ATGAAGCCAGACCGAGATACTCTGGATGAATATTTTGAATATGATGCAGAGGAGTTCTTGGTCTCTTTGG
CCTTGCTGATAACAGAAGGACGAACACCTGAATGTTCTGTAAAAGGTCGAACAGAAAGCTTTCATTGCCC
TCCAGCACAGTCTTGTTACCCAGTAACTACCAAACATGAATGTAGTGACAAGCTGGCCCAGTGCCGCCAA
GCCAGACGAACTAGGTCTGAGGTCACATTGTTGTGGAAGAATAACCTTCCAATCATGGTGGAAATGATGC
TACTACCAGACTGCTGCTACAGCGATGATGGGCCCACCACAGAGGGAATTGATCTAAATGATCCTGCGAT
TAAGCAAGATGCATTATTATTAGAAAGATGGATCTTGGAGCCAGTTCCTCGACAGAATGGTGACCGATTT
ATTGAAGAGAAGACGCTTCTGTTGGCTGTCCGCTCATTTGTGTTTTTTTCTCAGTTAAGTGCATGGCTGA
GTGTTTCTCATGGTGCTATTCCACGAAATATTCTCTACAGAATCAGTGCTGCTGATGTAGACCTACAGTG
GAATTTTTCACAGACTCCAATTGAGCATGTGTTTCCTGTTCCCAATGTTTCTCACAATGTTGCCTTGAAA
GTCAGTGTTCAGTCCTTGCCCAGACAATCTAATTATCCAGTTTTGACGTGCAGTATTCACACTAATATTG
GCCTTTATGAGAAAAGAATTCAACAACATAAACTTAAAACTCATCAGCACCATAACCCAAATGAAGCAGA
ACAATGTGGTACAAACAGTTCACAGCGTCTGTGTAGCAAACAAACTTGGACCATGGCACCTGAAAGTGTG
TTACATGCAAAAAGTGGCCCAAGTCCAGAATATACTGCAGCTGTCAAAAATATCAAACTATATCCAGGCA
CTGGCAGTAAATCTGACCATGGGACATCTCAAGCCAATATTCTAGGCTTTAGTGGTATAGGTGATATAAA
ATCACAAGAAACATCAGTGAGAACTTTAAAATCATTTTCAATGGTTGATTCCAGTATCTCTAACCGCCAG
AGTTTCTGGCAGTCAGCTGGTGAGACTAACCCTTTAATAGGCTCTTTAATTCAGGAGCGGCAAGAAATCA
TTGCAAGAATTGCCCAACATTTGATTCATTGTGATCCAAGCACTTCACATGTTTCTGGACGTCCATTTAA
TACTCAAGAGTCTAGTTCACTCCATTCAAAACTTTTCCGGGTTTCACAAGAAAATGAGAACGTGGGAAAA
GGTAAAGAAGCTTTCTCCATGACTTTTGGTAGTCCAGAGTTTAGTTCCCCAGAAGACACCAATGAGGGGA
AAATTCGACTAAAACCAGAAACTCCTCGAAGTGAAACTTGTATTTCTAATGACTTTTATTCTCATATGCC
TGTTGGAGAGACTAATCCTTTGATAGGCTCTTTACTCCAGGAGCGGCAAGATGTTATTGCAAGGATTGCT
CAACACTTGGAGCACATTGATCCAACAGCATCACATATCCCCCGGCAGTCATTCAACATGCATGACTCCA
GTTCGGTTGCATCTAAAGTGTTTAGGAGTTCATATGAAGACAAAAATTTGTTGAAGAAAAATAAGGATGA
GTCCTCAGTTTCCATTTCTCACACAAAATGTTCCTTGTTAGGAGACATCAGTGATGGGAAAAACTTAGTA
CCTAATAAATGTTTTACTTCTTTTAAAAATAATAGTAAAGAAAAGTGTTCTTTGAAACATCAAACAAGAA
ATCAGTGTCAGAACAATCCTAGTGAAATCATCCAAAGTACGTATCAGGAGACACAGAACAAAAGTTCTAG
TTTATCAACTTCCTCAATTTTGTCTCAGCACAAAGAAAATAACTTAGATTTGACAAGCAGATTCAAGGAG
CAAGAAATGAGCAATGGAATTGATAAACAGTATTCAAATTGCACCACTATTGACAAACAGATTTGTACAA
ATAAGTATAAGGAAAAAATAATAAATGAGAACTATAATCCAAAATTCTTTGGCAATCTTCAGTCTGATGA
TTCCAAAAAAAATGACTCAAAAATAAAAGTTACTGTGTTGGAAATGTCTGAATATTTGAACAAATATGAA
AGCATGTCCTCAAATAAAGACTCAAAAAGGCCTAAGACATGTGAGCAAAATACTCAACTTAATAGCATAG
AGAATTATCTCAATAAAGATAATGAAGGTTTCAAATGTAAAAAGTCAGACCAATTAAAAAATGAACAAGA
TAAGCAAGAAGATCCAACTAATGAAAAATCCCAAAACTATTCTCAGAGAAGAAGTATAAAAGACTGTTTG
TCTACATGTGAGCAACCAAAAAATACAGAGGTATTGAGGACTACACTGAAACATTCAAATGTGTGGCGAA
AACATAATTTTCATTCCTTGGATGGAACTTCAACCAGAGCCTTTCATCCTCAAACTGGATTGCCTCTTCT
TTCAAGCCCTGTTCCTCAAAGAAAAACACAATCAGGTTGCTTTGATCTGGATTCTTCATTACTACATCTG
AAAAGCTTCTCATCTAGAAGTCCTCGACCATGTTTAAACATTGAAGATGATCCAGATATTCATGAAAAAC
CATTTTTGAGTTCTAGTGCTCCACCTATAACAAGTCTTAGTCTCCTAGGAAATTTTGAGGAATCTGTCTT
GAACTATCGTTTCGATCCTCTCGGCATTGTTGATGGTTTTACTGCCGAGGTAGGGGCAAGTGGTGCTTTC
TGCCCCACACATTTGACTCTTCCAGTTGAAGTGTCATTCTACAGTGTTTCAGATGACAATGCTCCCTCTC
CTTATATGGGTGTGATTACTTTAGAGTCCCTTGGTAAAAGGGGTTATCGAGTACCTCCTTCAGGAACAAT
ACAAGTGACCTTATTTAATCCTAATAAGACTGTGGTGAAGATGTTTGTTGTGATATATGATTTACGAGAT
ATGCCAGCCAATCATCAGACATTCCTACGACAAAGAACTTTTTCTGTACCTGTTAAACAAGAAGTGAAGA
GAAGTGTTAATAAAGAGAACATCCGACACACAGAAGAACGGTTATTACGCTACCTCATACATCTGAGGTT
CCAGAGTTCTAAATCTGGAAAGATCTACCTCCATAGAGACGTACGGCTCCTGTTCTCTAGAAAGTCAATG
GAGGTTGATAGCGGTGCTGCATATGAACTCAAATCTTACACTGAATCACCAACAAACCCTCAGTTTTCAC
CAAGATGTTGA

Translation (1076 aa):
MKPDRDTLDEYFEYDAEEFLVSLALLITEGRTPECSVKGRTESFHCPPAQSCYPVTTKHECSDKLAQCRQ
ARRTRSEVTLLWKNNLPIMVEMMLLPDCCYSDDGPTTEGIDLNDPAIKQDALLLERWILEPVPRQNGDRF
IEEKTLLLAVRSFVFFSQLSAWLSVSHGAIPRNILYRISAADVDLQWNFSQTPIEHVFPVPNVSHNVALK
VSVQSLPRQSNYPVLTCSIHTNIGLYEKRIQQHKLKTHQHHNPNEAEQCGTNSSQRLCSKQTWTMAPESV
LHAKSGPSPEYTAAVKNIKLYPGTGSKSDHGTSQANILGFSGIGDIKSQETSVRTLKSFSMVDSSISNRQ
SFWQSAGETNPLIGSLIQERQEIIARIAQHLIHCDPSTSHVSGRPFNTQESSSLHSKLFRVSQENENVGK
GKEAFSMTFGSPEFSSPEDTNEGKIRLKPETPRSETCISNDFYSHMPVGETNPLIGSLLQERQDVIARIA
QHLEHIDPTASHIPRQSFNMHDSSSVASKVFRSSYEDKNLLKKNKDESSVSISHTKCSLLGDISDGKNLV
PNKCFTSFKNNSKEKCSLKHQTRNQCQNNPSEIIQSTYQETQNKSSSLSTSSILSQHKENNLDLTSRFKE
QEMSNGIDKQYSNCTTIDKQICTNKYKEKIINENYNPKFFGNLQSDDSKKNDSKIKVTVLEMSEYLNKYE
SMSSNKDSKRPKTCEQNTQLNSIENYLNKDNEGFKCKKSDQLKNEQDKQEDPTNEKSQNYSQRRSIKDCL
STCEQPKNTEVLRTTLKHSNVWRKHNFHSLDGTSTRAFHPQTGLPLLSSPVPQRKTQSGCFDLDSSLLHL
KSFSSRSPRPCLNIEDDPDIHEKPFLSSSAPPITSLSLLGNFEESVLNYRFDPLGIVDGFTAEVGASGAF
CPTHLTLPVEVSFYSVSDDNAPSPYMGVITLESLGKRGYRVPPSGTIQVTLFNPNKTVVKMFVVIYDLRD
MPANHQTFLRQRTFSVPVKQEVKRSVNKENIRHTEERLLRYLIHLRFQSSKSGKIYLHRDVRLLFSRKSM
EVDSGAAYELKSYTESPTNPQFSPRC


Links Key
 Links to:   History report
  BLAST report
  Entrez Gene
  Nucleotide report
  Protein report
 Re-query CCDS DB by:   CCDS ID
  Gene ID
  Nucleotide ID
  Protein ID
 Genome Browser Links:   Ensembl Genome Browser
  NCBI Sequence Viewer
  UCSC Genome Browser
  VEGA Genome Browser

Disclaimer | Write to the Help Desk
NCBI | NLM | NIH