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Report for CCDS45198.1 (current version)

CCDS Status Species Chrom. Gene CCDS Release NCBI Annotation Release Ensembl Annotation Release Links
45198.1 Public Homo sapiens 15 ENTREP2 24 110 108 CCDS HistoryNCBI Gene:23359Re-query CCDS DB by CCDS ID:45198.1Re-query CCDS DB by GeneID:23359See the combined annotation on chromosome 15 in Sequence Viewer

Public since: CCDS release 6, NCBI annotation release 37.1, Ensembl annotation release 55

Review status: Reviewed (by RefSeq and Havana)

Sequence IDs included in CCDS 45198.1

Original Current Source Nucleotide ID Protein ID MANE Status in CCDS Seq. Status Links
Original member Current member EBI ENST00000261275.5 ENSP00000261275.4 MANE Select Accepted alive Link to Ensembl Transcript Viewer:ENST00000261275.5Link to Ensembl Protein Viewer:ENSP00000261275.4Re-query CCDS DB by Nucleotide ID:ENST00000261275Re-query CCDS DB by Protein ID:ENSP00000261275
Original member Current member NCBI NM_015307.2 NP_056122.1 MANE Select Accepted alive Link to Nucleotide Sequence:NM_015307.2Link to Protein Sequence:NP_056122.1Re-query CCDS DB by Nucleotide ID:NM_015307Re-query CCDS DB by Protein ID:NP_056122Link to BLAST:NP_056122.1

RefSeq Length Related UniProtKB/SwissProt Length Identity Gaps Mismatches
NP_056122.1 539 O60320-1 539 100% 0 0

Chromosomal Locations for CCDS 45198.1

Assembly GRCh38.p14 (GCF_000001405.40)

On '-' strand of Chromosome 15 (NC_000015.10)
Genome Browser links: Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 15Link to Ensembl Genome Browser on chromosome 15See the combined annotation on chromosome 15 in Sequence Viewer

Chromosome Start Stop Links
15 29123339 29123655 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 15Link to Ensembl Genome Browser on chromosome 15
15 29124687 29124761 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 15Link to Ensembl Genome Browser on chromosome 15
15 29126267 29126491 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 15Link to Ensembl Genome Browser on chromosome 15
15 29128789 29128864 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 15Link to Ensembl Genome Browser on chromosome 15
15 29136366 29136501 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 15Link to Ensembl Genome Browser on chromosome 15
15 29137034 29137194 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 15Link to Ensembl Genome Browser on chromosome 15
15 29151734 29151841 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 15Link to Ensembl Genome Browser on chromosome 15
15 29196430 29196564 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 15Link to Ensembl Genome Browser on chromosome 15
15 29252368 29252478 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 15Link to Ensembl Genome Browser on chromosome 15
15 29381775 29381831 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 15Link to Ensembl Genome Browser on chromosome 15
15 29570505 29570723 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 15Link to Ensembl Genome Browser on chromosome 15

CCDS Sequence Data
Blue highlighting indicates alternating exons.
Red highlighting indicates amino acids encoded across a splice junction.
 
Mouse over the nucleotide or protein sequence below and click on the highlighted codon or residue to select the pair.

Nucleotide Sequence (1620 nt):
ATGCCTCCGGCCGGCGGCCCCCGAGCGCCGCGTCCCGCCGCGCTGCCCCGCAGCCTGTCCCGCCTGCGCG
AGTGCCCGGGCCGCTCCCGCATCGTGCTGGCGCTCGGGGCCACGCAGATGGCGCTCGGATGCCTCATCGT
GGCAGTCAGCTTCGCCGCGCTGGCGCTCACCACCTCGGCCCGCGTCCGCCACTCCTGCCCCTTCTGGGCA
GGCTTCTCGGTGCTGCTGTCGGGACTCATAGGTGTCGTCTCCTGGAAGAGGCCTCTCTCCCTTGTGATAA
CCTTTTTCATGCTGCTTTCTGCAGTGTGTGTAATGCTGAATTTGGCTGGTTCAATTCTCTCTTGTCAGAA
TGCTCAGCTAGTCAACTCCCTAGAAGGCTGCCAGTTGATTAAGTTTGACAGTGTGGAGGTGTGTGTCTGC
TGTGAGCTGCAGCACCAGTCGTCCGGCTGCAGCAACCTCGGGGAGACGCTGAAGCTGAACCCGCTGCAGG
AGAACTGCAACGCTGTGAGGCTGACCTTGAAGGATCTCCTCTTCAGCGTGTGTGCCCTCAACGTCCTGTC
CACTATCGTGTGTGCGCTGGCCACAGCCATGTGCTGTATGCAGATGGTCTCCTCCGATGTCCTGCAGATG
TTCCTTCCGCAGAGGTCACATCCTGCCAACCCCACCTGCGTGACTCCTCACGGCACCGTTCTCCACCAGA
CCCTGGATTTCGACGAGTTCATCCCCCCACTCCCGCCTCCACCCTATTACCCCCCAGAGTACACCTGCAC
ACCGTCCACTGAGGCCCAGAGGGGCCTCCACCTGGACTTTGCTCCGTCTCCATTCGGCACTTTGTATGAC
GTGGCCATCAATAGCCCCGGCCTGCTCTATCCTGCTGAGCTCCCCCCTCCGTACGAGGCGGTGGTGGGCC
AGCCCCCTGCCAGCCAGGTTACAAGTATAGGTCAGCAGGTGGCCGAGTCCAGCTCCGGGGACCCAAACAC
CAGTGCTGGCTTCAGCACTCCAGTACCAGCTGACAGCACAAGCCTCCTGGTGTCCGAGGGCACTGCTACG
CCAGGTTCCAGCCCATCCCCCGATGGCCCTGTGGGCGCCCCAGCACCCTCCGAACCTGCCCTTCCCCCTG
GCCATGTGTCTCCAGAGGATCCTGGCATGGGCTCACAGGTGCAGCCAGGTCCCGGGCGTGTGTCCCGCTC
CACCAGCGACCCCACCTTGTGCACATCTAGCATGGCAGGCGATGCCTCTTCACACAGGCCGTCGTGTAGC
CAGGACCTGGAAGCGGGACTGTCTGAGGCTGTGCCTGGGAGCGCTTCCATGTCTCGCTCTGCCACGGCTG
CCTGTCGGGCCCAGCTTTCACCAGCGGGGGACCCAGATACCTGGAAAACTGACCAACGGCCAACACCAGA
GCCCTTCCCAGCGACCTCCAAAGAGCGGCCACGCTCTTTAGTGGACAGCAAGGCCTATGCGGATGCCAGG
GTTTTGGTGGCCAAGTTTTTGGAACACTCACACTGTGCCCTCCCCACCGAGGCACAGCACATGGTGGGTG
CCATGCGCTTGGCTGTCACCAACGAGGAGCGCCTCGAGGAGGAGGCCGTCTTCGGCGCTGACGTTCTGGA
CCAGGTATGA

Translation (539 aa):
MPPAGGPRAPRPAALPRSLSRLRECPGRSRIVLALGATQMALGCLIVAVSFAALALTTSARVRHSCPFWA
GFSVLLSGLIGVVSWKRPLSLVITFFMLLSAVCVMLNLAGSILSCQNAQLVNSLEGCQLIKFDSVEVCVC
CELQHQSSGCSNLGETLKLNPLQENCNAVRLTLKDLLFSVCALNVLSTIVCALATAMCCMQMVSSDVLQM
FLPQRSHPANPTCVTPHGTVLHQTLDFDEFIPPLPPPPYYPPEYTCTPSTEAQRGLHLDFAPSPFGTLYD
VAINSPGLLYPAELPPPYEAVVGQPPASQVTSIGQQVAESSSGDPNTSAGFSTPVPADSTSLLVSEGTAT
PGSSPSPDGPVGAPAPSEPALPPGHVSPEDPGMGSQVQPGPGRVSRSTSDPTLCTSSMAGDASSHRPSCS
QDLEAGLSEAVPGSASMSRSATAACRAQLSPAGDPDTWKTDQRPTPEPFPATSKERPRSLVDSKAYADAR
VLVAKFLEHSHCALPTEAQHMVGAMRLAVTNEERLEEEAVFGADVLDQV


Links Key
 Links to:   History report
  BLAST report
  Entrez Gene
  Nucleotide report
  Protein report
 Re-query CCDS DB by:   CCDS ID
  Gene ID
  Nucleotide ID
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 Genome Browser Links:   Ensembl Genome Browser
  NCBI Sequence Viewer
  UCSC Genome Browser
  VEGA Genome Browser

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