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Report for CCDS44874.1 (current version)

CCDS Status Species Chrom. Gene CCDS Release NCBI Annotation Release Ensembl Annotation Release Links
44874.1 Public Homo sapiens 12 FMNL3 24 110 108 CCDS HistoryNCBI Gene:91010Re-query CCDS DB by CCDS ID:44874.1Re-query CCDS DB by GeneID:91010See the combined annotation on chromosome 12 in Sequence Viewer

Public since: CCDS release 6, NCBI annotation release 37.1, Ensembl annotation release 55

Review status: Reviewed (by RefSeq and Havana)

Sequence IDs included in CCDS 44874.1

Original Current Source Nucleotide ID Protein ID MANE Status in CCDS Seq. Status Links
Original member Current member EBI ENST00000335154.10 ENSP00000335655.5 MANE Select Accepted alive Link to Ensembl Transcript Viewer:ENST00000335154.10Link to Ensembl Protein Viewer:ENSP00000335655.5Re-query CCDS DB by Nucleotide ID:ENST00000335154Re-query CCDS DB by Protein ID:ENSP00000335655
Original member Current member NCBI NM_175736.5 NP_783863.4 MANE Select Accepted alive Link to Nucleotide Sequence:NM_175736.5Link to Protein Sequence:NP_783863.4Re-query CCDS DB by Nucleotide ID:NM_175736Re-query CCDS DB by Protein ID:NP_783863Link to BLAST:NP_783863.4

RefSeq Length Related UniProtKB/SwissProt Length Identity Gaps Mismatches
NP_783863.4 1027 Q8IVF7-3 1027 100% 0 0

Chromosomal Locations for CCDS 44874.1

Assembly GRCh38.p14 (GCF_000001405.40)

On '-' strand of Chromosome 12 (NC_000012.12)
Genome Browser links: Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 12Link to Ensembl Genome Browser on chromosome 12See the combined annotation on chromosome 12 in Sequence Viewer

Chromosome Start Stop Links
12 49645815 49645903 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 12Link to Ensembl Genome Browser on chromosome 12
12 49646886 49647009 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 12Link to Ensembl Genome Browser on chromosome 12
12 49647276 49647368 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 12Link to Ensembl Genome Browser on chromosome 12
12 49647703 49647804 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 12Link to Ensembl Genome Browser on chromosome 12
12 49648193 49648353 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 12Link to Ensembl Genome Browser on chromosome 12
12 49649029 49649158 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 12Link to Ensembl Genome Browser on chromosome 12
12 49649259 49649339 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 12Link to Ensembl Genome Browser on chromosome 12
12 49649470 49649538 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 12Link to Ensembl Genome Browser on chromosome 12
12 49649691 49649925 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 12Link to Ensembl Genome Browser on chromosome 12
12 49650676 49650878 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 12Link to Ensembl Genome Browser on chromosome 12
12 49651168 49651292 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 12Link to Ensembl Genome Browser on chromosome 12
12 49651382 49651450 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 12Link to Ensembl Genome Browser on chromosome 12
12 49651933 49652212 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 12Link to Ensembl Genome Browser on chromosome 12
12 49653226 49653327 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 12Link to Ensembl Genome Browser on chromosome 12
12 49653725 49653874 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 12Link to Ensembl Genome Browser on chromosome 12
12 49654192 49654302 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 12Link to Ensembl Genome Browser on chromosome 12
12 49654910 49654984 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 12Link to Ensembl Genome Browser on chromosome 12
12 49656404 49656497 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 12Link to Ensembl Genome Browser on chromosome 12
12 49656823 49656899 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 12Link to Ensembl Genome Browser on chromosome 12
12 49657082 49657190 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 12Link to Ensembl Genome Browser on chromosome 12
12 49658442 49658594 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 12Link to Ensembl Genome Browser on chromosome 12
12 49661966 49662049 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 12Link to Ensembl Genome Browser on chromosome 12
12 49665832 49665908 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 12Link to Ensembl Genome Browser on chromosome 12
12 49666127 49666207 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 12Link to Ensembl Genome Browser on chromosome 12
12 49668471 49668554 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 12Link to Ensembl Genome Browser on chromosome 12
12 49707055 49707180 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 12Link to Ensembl Genome Browser on chromosome 12

CCDS Sequence Data
Blue highlighting indicates alternating exons.
Red highlighting indicates amino acids encoded across a splice junction.
 
Mouse over the nucleotide or protein sequence below and click on the highlighted codon or residue to select the pair.

Nucleotide Sequence (3084 nt):
ATGGGCAACCTGGAGAGCGCCGAGGGGGTCCCGGGAGAGCCCCCCTCTGTCCCGTTGTTGCTGCCGCCCG
GCAAGATGCCGATGCCTGAGCCCTGTGAGCTGGAGGAAAGGTTCGCCCTGGTGCTGAGCTCCATGAACCT
GCCTCCAGACAAGGCCCGGCTCCTGCGGCAGTATGACAATGAGAAGAAATGGGATCTGATCTGTGACCAG
GAACGATTCCAGGTGAAGAATCCTCCCCACACTTACATTCAGAAACTCCAGAGCTTCTTGGACCCCAGTG
TAACTCGGAAGAAGTTCAGGAGGAGGGTGCAGGAGTCAACCAAAGTACTAAGGGAGCTGGAGATCTCTCT
TCGCACCAACCACATTGGGTGGGTGCGGGAATTTCTGAATGATGAAAACAAAGGCCTGGATGTACTGGTG
GATTACCTGTCCTTTGCCCAGTGTTCTGTCATGTTTGACTTTGAGGGTCTGGAAAGTGGTGACGATGGTG
CATTTGACAAACTCCGGTCCTGGAGCAGGTCAATCGAGGACCTGCAGCCACCCAGCGCCCTGTCGGCCCC
CTTCACCAACAGCCTCGCTCGCTCTGCGCGCCAGTCTGTGCTCCGGTATAGCACTCTCCCTGGGCGCAGG
GCCCTGAAGAACTCCCGCCTAGTGAGCCAGAAGGATGACGTCCACGTCTGTATCCTTTGTCTCAGAGCCA
TCATGAACTATCAGTACGGATTCAACCTGGTCATGTCCCACCCCCATGCTGTCAATGAGATTGCACTTAG
CCTCAATAACAAGAATCCAAGGACCAAAGCCCTTGTCTTAGAGCTTCTGGCAGCTGTGTGTTTGGTGCGA
GGAGGTCACGAAATCATCCTTGCTGCCTTTGACAATTTCAAAGAGGTATGCAAGGAGCTGCACCGCTTTG
AGAAGCTGATGGAGTATTTCCGGAATGAGGACAGCAATATTGACTTCATGGTGGCCTGCATGCAGTTCAT
CAACATCGTGGTGCACTCGGTGGAGGACATGAACTTCCGGGTCCACCTGCAGTATGAGTTTACCAAGCTG
GGGCTAGAGGAGTTCCTGCAGAAGTCAAGGCACACAGAGAGCGAGAAGCTGCAGGTGCAGATTCAGGCAT
ATCTGGACAACGTGTTTGATGTCGGGGGTTTGTTGGAGGATGCTGAGACCAAGAATGTAGCCCTGGAGAA
GGTGGAGGAGTTGGAGGAGCATGTGTCCCATCTCACAGAGAAGCTTCTGGACCTAGAGAATGAAAACATG
ATGCGGGTGGCAGAACTAGAGAAGCAGCTGCTACAGCGGGAGAAGGAACTAGAGAGCATCAAGGAGACAT
ATGAGAACACAAGCCACCAGGTGCACACCCTGCGGAGGCTCATTAAAGAGAAGGAGGAGGCCTTTCAGCG
TCGATGTCATTTGGAGCCAAATGTCCGGGGCCTGGAGTCTGTGGACAGTGAGGCCCTGGCCAGAGTAGGC
CCTGCAGAGCTGAGTGAGGGCATGCCACCCTCCGACCTGGACCTTCTGGCTCCAGCCCCACCCCCTGAGG
AGGTCCTGCCTCTTCCTCCACCACCAGCTCCGCCCTTGCCCCCTCCACCTCCCCCATTACCAGACAAGTG
TCCCCCAGCCCCACCTCTCCCTGGTGCTGCACCCTCTGTGGTGTTGACAGTGGGCCTGTCAGCCATTCGA
ATTAAGAAACCTATCAAGACCAAGTTCCGGCTGCCTGTCTTCAACTGGACAGCACTGAAACCCAACCAGA
TCAGTGGCACTGTCTTCAGCGAACTTGATGATGAGAAGATCTTGGAGGACCTGGATCTTGATAAGTTTGA
AGAATTATTCAAGACAAAAGCGCAGGGCCCTGCCCTTGACCTCATCTGCTCCAAAAACAAGACAGCGCAA
AAAGCTGCCAGCAAGGTGACTCTGTTGGAAGCCAATCGTGCCAAGAACCTGGCCATCACCCTACGCAAGG
CTGGCCGCTCGGCTGAGGAGATCTGCAGGGCCATTCATACGTTTGACTTGCAGACACTACCTGTGGACTT
CGTGGAGTGCCTGATGCGCTTCCTGCCCACAGAGGCTGAGGTAAAGCTGCTGCGGCAATATGAGCGGGAG
CGGCAGCCCCTGGAGGAGTTGGCAGCTGAGGACCGCTTCATGCTGCTCTTCAGCAAGGTGGAACGGTTGA
CCCAGCGAATGGCTGGCATGGCCTTCCTGGGGAACTTCCAGGATAACCTGCAGATGCTCACACCGCAACT
CAATGCCATCATTGCGGCGTCCGCTTCCGTCAAGTCTTCACAGAAGCTGAAGCAGATGTTGGAGATCATA
CTTGCACTGGGGAACTACATGAACAGCAGCAAGCGGGGAGCTGTGTATGGCTTCAAGCTCCAGAGCCTGG
ATCTGCTGCTGGATACCAAGTCCACTGACCGGAAGATGACACTGCTTCATTTCATCGCCTTGACAGTGAA
GGAGAAATACCCAGACCTGGCTAACTTCTGGCATGAGCTGCACTTTGTTGAGAAGGCTGCAGCAGTGTCC
CTGGAGAACGTGCTGCTGGACGTGAAGGAGCTGGGCCGGGGCATGGAGCTGATTCGGCGTGAGTGCAGCA
TCCATGACAACAGCGTCCTCCGGAACTTCCTCAGTACCAATGAAGGCAAACTAGACAAGCTCCAGCGGGA
CGCCAAGACGGCTGAGGAGGCCTACAATGCAGTTGTGCGCTACTTTGGCGAGAGTCCCAAGACTACACCT
CCTTCTGTATTCTTCCCAGTATTTGTCCGATTCATTCGTTCTTACAAGGAAGCAGAACAAGAGAATGAAG
CCCGCAAGAAGCAGGAGGAGGTAATGCGGGAGAAGCAGCTGGCTCAGGAAGCCAAGAAACTGGATGCCAA
GACCCCATCCCAGCGGAACAAGTGGCAACAGCAGGAGTTAATAGCAGAGTTGAGGCGGCGCCAGGCCAAG
GAACACCGGCCTGTTTATGAGGGGAAGGATGGTACCATCGAGGACATCATCACAGGCCTCCACTGCCAGC
CTATGGTTGTTCGCCACCAAGCCAGGAGTGCTGCACCGCCCAGTGGTCCCCCTCGGGCTCCAGGCCCCCA
CTGA

Translation (1027 aa):
MGNLESAEGVPGEPPSVPLLLPPGKMPMPEPCELEERFALVLSSMNLPPDKARLLRQYDNEKKWDLICDQ
ERFQVKNPPHTYIQKLQSFLDPSVTRKKFRRRVQESTKVLRELEISLRTNHIGWVREFLNDENKGLDVLV
DYLSFAQCSVMFDFEGLESGDDGAFDKLRSWSRSIEDLQPPSALSAPFTNSLARSARQSVLRYSTLPGRR
ALKNSRLVSQKDDVHVCILCLRAIMNYQYGFNLVMSHPHAVNEIALSLNNKNPRTKALVLELLAAVCLVR
GGHEIILAAFDNFKEVCKELHRFEKLMEYFRNEDSNIDFMVACMQFINIVVHSVEDMNFRVHLQYEFTKL
GLEEFLQKSRHTESEKLQVQIQAYLDNVFDVGGLLEDAETKNVALEKVEELEEHVSHLTEKLLDLENENM
MRVAELEKQLLQREKELESIKETYENTSHQVHTLRRLIKEKEEAFQRRCHLEPNVRGLESVDSEALARVG
PAELSEGMPPSDLDLLAPAPPPEEVLPLPPPPAPPLPPPPPPLPDKCPPAPPLPGAAPSVVLTVGLSAIR
IKKPIKTKFRLPVFNWTALKPNQISGTVFSELDDEKILEDLDLDKFEELFKTKAQGPALDLICSKNKTAQ
KAASKVTLLEANRAKNLAITLRKAGRSAEEICRAIHTFDLQTLPVDFVECLMRFLPTEAEVKLLRQYERE
RQPLEELAAEDRFMLLFSKVERLTQRMAGMAFLGNFQDNLQMLTPQLNAIIAASASVKSSQKLKQMLEII
LALGNYMNSSKRGAVYGFKLQSLDLLLDTKSTDRKMTLLHFIALTVKEKYPDLANFWHELHFVEKAAAVS
LENVLLDVKELGRGMELIRRECSIHDNSVLRNFLSTNEGKLDKLQRDAKTAEEAYNAVVRYFGESPKTTP
PSVFFPVFVRFIRSYKEAEQENEARKKQEEVMREKQLAQEAKKLDAKTPSQRNKWQQQELIAELRRRQAK
EHRPVYEGKDGTIEDIITGLHCQPMVVRHQARSAAPPSGPPRAPGPH


Links Key
 Links to:   History report
  BLAST report
  Entrez Gene
  Nucleotide report
  Protein report
 Re-query CCDS DB by:   CCDS ID
  Gene ID
  Nucleotide ID
  Protein ID
 Genome Browser Links:   Ensembl Genome Browser
  NCBI Sequence Viewer
  UCSC Genome Browser
  VEGA Genome Browser

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