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Report for CCDS44859.1 (current version)

CCDS Status Species Chrom. Gene CCDS Release NCBI Annotation Release Ensembl Annotation Release Links
44859.1 Public Homo sapiens 12 BICD1 24 110 108 CCDS HistoryNCBI Gene:636Re-query CCDS DB by CCDS ID:44859.1Re-query CCDS DB by GeneID:636See the combined annotation on chromosome 12 in Sequence Viewer

Public since: CCDS release 6, NCBI annotation release 37.1, Ensembl annotation release 55

Review status: Reviewed (by RefSeq and Havana)

Sequence IDs included in CCDS 44859.1

Original Current Source Nucleotide ID Protein ID MANE Status in CCDS Seq. Status Links
Original member Current member EBI ENST00000548411.6 ENSP00000446793.1 Accepted alive Link to Ensembl Transcript Viewer:ENST00000548411.6Link to Ensembl Protein Viewer:ENSP00000446793.1Re-query CCDS DB by Nucleotide ID:ENST00000548411Re-query CCDS DB by Protein ID:ENSP00000446793
Original member Current member NCBI NM_001003398.3 NP_001003398.1 Accepted alive Link to Nucleotide Sequence:NM_001003398.3Link to Protein Sequence:NP_001003398.1Re-query CCDS DB by Nucleotide ID:NM_001003398Re-query CCDS DB by Protein ID:NP_001003398Link to BLAST:NP_001003398.1

RefSeq Length Related UniProtKB/SwissProt Length Identity Gaps Mismatches
NP_001003398.1 835 Q96G01-4 835 100% 0 0

Chromosomal Locations for CCDS 44859.1

Assembly GRCh38.p14 (GCF_000001405.40)

On '+' strand of Chromosome 12 (NC_000012.12)
Genome Browser links: Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 12Link to Ensembl Genome Browser on chromosome 12See the combined annotation on chromosome 12 in Sequence Viewer

Chromosome Start Stop Links
12 32107332 32107544 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 12Link to Ensembl Genome Browser on chromosome 12
12 32216247 32216459 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 12Link to Ensembl Genome Browser on chromosome 12
12 32293994 32294146 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 12Link to Ensembl Genome Browser on chromosome 12
12 32305697 32306122 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 12Link to Ensembl Genome Browser on chromosome 12
12 32327461 32328555 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 12Link to Ensembl Genome Browser on chromosome 12
12 32334516 32334667 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 12Link to Ensembl Genome Browser on chromosome 12
12 32337499 32337706 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 12Link to Ensembl Genome Browser on chromosome 12
12 32367670 32367717 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 12Link to Ensembl Genome Browser on chromosome 12

CCDS Sequence Data
Blue highlighting indicates alternating exons.
Red highlighting indicates amino acids encoded across a splice junction.
 
Mouse over the nucleotide or protein sequence below and click on the highlighted codon or residue to select the pair.

Nucleotide Sequence (2508 nt):
ATGGCCGCAGAAGAGGTATTGCAGACGGTGGACCATTATAAGACTGAGATAGAGAGGCTAACCAAGGAGC
TCACGGAGACCACCCACGAGAAGATCCAGGCTGCCGAGTACGGGCTGGTGGTGCTGGAGGAGAAGCTGAC
CCTCAAACAGCAGTATGATGAACTGGAGGCTGAGTACGACAGCCTCAAACAGGAGCTGGAGCAGCTCAAA
GAGGCATTTGGGCAGTCCTTCTCCATCCACCGGAAGGTTGCTGAAGATGGAGAGACTCGGGAGGAAACGC
TTCTGCAGGAGTCAGCATCGAAGGAGGCTTACTATCTGGGGAAGATCTTGGAGATGCAGAACGAGCTGAA
ACAGAGCCGGGCTGTGGTCACTAATGTACAGGCAGAAAACGAGAGGCTCACCGCAGTCGTGCAGGATCTG
AAGGAGAACAATGAGATGGTGGAGCTACAGAGAATACGGATGAAGGATGAAATCCGAGAATATAAGTTCC
GGGAGGCACGGCTCCTTCAGGACTATACTGAATTGGAAGAAGAAAATATCACATTGCAGAAACTAGTGTC
CACGTTGAAGCAGAACCAGGTTGAATACGAAGGCTTAAAGCATGAGATTAAGCGATTTGAGGAGGAGACG
GTACTGCTGAACAGCCAGCTGGAAGATGCCATCCGATTGAAAGAGATTGCTGAGCACCAACTGGAAGAAG
CCCTCGAGACTTTAAAAAATGAAAGAGAGCAAAAGAACAACCTGCGGAAGGAGCTCTCCCAGTATATCAG
CCTCAATGATAACCATATCAGCATCTCAGTAGATGGACTCAAATTTGCCGAGGATGGGAGTGAACCAAAC
AATGATGACAAAATGAACGGTCATATCCATGGGCCTCTTGTGAAACTGAATGGAGACTATCGGACTCCCA
CCTTAAGGAAAGGAGAGTCTCTGAACCCTGTCTCTGACTTATTCAGTGAGCTGAACATTTCAGAAATACA
GAAGTTGAAGCAGCAGCTTATGCAGGTAGAGCGGGAAAAGGCCATTCTTTTGGCCAACCTACAGGAGTCA
CAGACACAGCTGGAACACACCAAGGGGGCACTGACGGAGCAGCATGAGCGGGTGCACCGGCTCACAGAGC
ACGTCAATGCCATGAGGGGCCTGCAAAGCAGCAAGGAGCTCAAGGCTGAGCTGGACGGGGAGAAGGGCCG
GGACTCAGGGGAGGAGGCCCATGACTATGAGGTGGACATCAATGGTTTAGAGATCCTTGAATGCAAATAC
AGGGTGGCAGTAACTGAGGTGATTGATCTGAAAGCTGAAATTAAGGCCTTAAAGGAGAAATATAATAAAT
CTGTAGAAAACTACACTGATGAGAAGGCCAAGTATGAGAGTAAAATCCAGATGTATGATGAGCAGGTGAC
AAGCCTTGAGAAGACCACCAAGGAGAGTGGTGAGAAGATGGCCCACATGGAGAAGGAGTTGCAAAAGATG
ACCAGCATAGCCAACGAAAATCACAGTACCCTTAATACGGCCCAGGATGAGTTAGTGACATTCAGTGAGG
AGTTAGCTCAGCTTTACCACCATGTGTGTCTATGTAATAATGAAACTCCCAACAGGGTCATGCTGGATTA
CTATAGGCAGAGCAGAGTCACCCGCAGTGGCAGCCTGAAAGGGCCCGATGATCCCAGAGGACTTTTGTCC
CCACGATTAGCCAGGCGGGGTGTGTCATCCCCGGTAGAAACAAGGACCTCATCTGAACCAGTTGCAAAAG
AAAGCACAGAGGCCAGCAAAGAACCAAGTCCAACTAAGACCCCCACAATCTCTCCTGTTATTACTGCCCC
ACCGTCATCTCCAGTATTGGATACAAGTGACATCCGCAAAGAGCCAATGAATATCTACAACCTTAATGCC
ATAATCCGGGACCAAATCAAGCATCTGCAGAAAGCTGTGGACCGGTCCTTGCAACTGTCTCGTCAAAGAG
CAGCGGCTCGGGAGCTAGCCCCCATGATTGATAAAGACAAGGAAGCCTTAATGGAAGAGATCCTCAAGCT
AAAGTCCCTGCTGAGCACCAAACGGGAGCAGATCGCCACATTGAGGGCGGTGTTGAAAGCCAACAAGCAG
ACAGCTGAGGTGGCGCTAGCTAATCTCAAGAACAAATATGAAAATGAAAAAGCAATGGTGACTGAAACCA
TGACGAAGCTTAGAAATGAACTGAAGGCTTTGAAAGAAGATGCTGCAACCTTCTCATCCCTGAGAGCAAT
GTTTGCAACAAGATGTGATGAATATGTCACCCAGTTGGATGAGATGCAGAGACAGTTAGCAGCTGCAGAG
GATGAGAAGAAGACTCTGAACACTTTGTTACGAATGGCTATCCAGCAAAAACTCGCCCTGACCCAGAGGC
TGGAGGACTTAGAGTTTGACCATGAGCAGTCCCGACGCAGCAAAGGCAAACTTGGAAAGAGCAAGATCGG
CAGCCCTAAAATTGTCAGCAGCCTGCTGCCTCCGTACCGCCACAGTGCTCACAACTAG

Translation (835 aa):
MAAEEVLQTVDHYKTEIERLTKELTETTHEKIQAAEYGLVVLEEKLTLKQQYDELEAEYDSLKQELEQLK
EAFGQSFSIHRKVAEDGETREETLLQESASKEAYYLGKILEMQNELKQSRAVVTNVQAENERLTAVVQDL
KENNEMVELQRIRMKDEIREYKFREARLLQDYTELEEENITLQKLVSTLKQNQVEYEGLKHEIKRFEEET
VLLNSQLEDAIRLKEIAEHQLEEALETLKNEREQKNNLRKELSQYISLNDNHISISVDGLKFAEDGSEPN
NDDKMNGHIHGPLVKLNGDYRTPTLRKGESLNPVSDLFSELNISEIQKLKQQLMQVEREKAILLANLQES
QTQLEHTKGALTEQHERVHRLTEHVNAMRGLQSSKELKAELDGEKGRDSGEEAHDYEVDINGLEILECKY
RVAVTEVIDLKAEIKALKEKYNKSVENYTDEKAKYESKIQMYDEQVTSLEKTTKESGEKMAHMEKELQKM
TSIANENHSTLNTAQDELVTFSEELAQLYHHVCLCNNETPNRVMLDYYRQSRVTRSGSLKGPDDPRGLLS
PRLARRGVSSPVETRTSSEPVAKESTEASKEPSPTKTPTISPVITAPPSSPVLDTSDIRKEPMNIYNLNA
IIRDQIKHLQKAVDRSLQLSRQRAAARELAPMIDKDKEALMEEILKLKSLLSTKREQIATLRAVLKANKQ
TAEVALANLKNKYENEKAMVTETMTKLRNELKALKEDAATFSSLRAMFATRCDEYVTQLDEMQRQLAAAE
DEKKTLNTLLRMAIQQKLALTQRLEDLEFDHEQSRRSKGKLGKSKIGSPKIVSSLLPPYRHSAHN


Links Key
 Links to:   History report
  BLAST report
  Entrez Gene
  Nucleotide report
  Protein report
 Re-query CCDS DB by:   CCDS ID
  Gene ID
  Nucleotide ID
  Protein ID
 Genome Browser Links:   Ensembl Genome Browser
  NCBI Sequence Viewer
  UCSC Genome Browser
  VEGA Genome Browser

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