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Report for CCDS44835.1 (current version)

CCDS Status Species Chrom. Gene CCDS Release NCBI Annotation Release Ensembl Annotation Release Links
44835.1 Public Homo sapiens 12 GSG1 24 110 108 CCDS HistoryNCBI Gene:83445Re-query CCDS DB by CCDS ID:44835.1Re-query CCDS DB by GeneID:83445See the combined annotation on chromosome 12 in Sequence Viewer

Public since: CCDS release 6, NCBI annotation release 37.1, Ensembl annotation release 55

Review status: Reviewed (by RefSeq and Havana)

Sequence IDs included in CCDS 44835.1

Original Current Source Nucleotide ID Protein ID MANE Status in CCDS Seq. Status Links
Original member Current member EBI ENST00000337630.10 ENSP00000336816.6 Accepted alive Link to Ensembl Transcript Viewer:ENST00000337630.10Link to Ensembl Protein Viewer:ENSP00000336816.6Re-query CCDS DB by Nucleotide ID:ENST00000337630Re-query CCDS DB by Protein ID:ENSP00000336816
Original member Current member NCBI NM_153823.5 NP_722545.2 Accepted alive Link to Nucleotide Sequence:NM_153823.5Link to Protein Sequence:NP_722545.2Re-query CCDS DB by Nucleotide ID:NM_153823Re-query CCDS DB by Protein ID:NP_722545Link to BLAST:NP_722545.2

RefSeq Length Related UniProtKB/SwissProt Length Identity Gaps Mismatches
NP_722545.2 326 Q2KHT4-3 326 100% 0 0

Chromosomal Locations for CCDS 44835.1

Assembly GRCh38.p14 (GCF_000001405.40)

On '-' strand of Chromosome 12 (NC_000012.12)
Genome Browser links: Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 12Link to Ensembl Genome Browser on chromosome 12See the combined annotation on chromosome 12 in Sequence Viewer

Chromosome Start Stop Links
12 13084901 13085243 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 12Link to Ensembl Genome Browser on chromosome 12
12 13087152 13087263 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 12Link to Ensembl Genome Browser on chromosome 12
12 13087907 13088059 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 12Link to Ensembl Genome Browser on chromosome 12
12 13088862 13088909 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 12Link to Ensembl Genome Browser on chromosome 12
12 13090503 13090818 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 12Link to Ensembl Genome Browser on chromosome 12
12 13095599 13095607 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 12Link to Ensembl Genome Browser on chromosome 12

CCDS Sequence Data
Blue highlighting indicates alternating exons.
Red highlighting indicates amino acids encoded across a splice junction.
 
Mouse over the nucleotide or protein sequence below and click on the highlighted codon or residue to select the pair.

Nucleotide Sequence (981 nt):
ATGGCCAAGATGGAGCTCTCGAAGGCCTTCTCTGGCCAGCGGACACTCCTATCTGCCATCCTCAGCATGC
TATCACTCAGCTTCTCCACAACATCCCTGCTCAGCAACTACTGGTTTGTGGGCACACAGAAGGTGCCCAA
GCCCCTGTGCGAGAAAGGTCTGGCAGCCAAGTGCTTTGACATGCCAGTGTCCCTGGATGGAGATACCAAC
ACATCCACCCAGGAGGTGGTACAATACAACTGGGAGACTGGGGATGACCGGTTCTCCTTCCGGAGCTTCC
GGAGTGGCATGTGGCTATCCTGTGAGGAAACTGTGGAAGAACCAGGGGAGAGGTGCCGAAGTTTCATTGA
ACTTACACCACCAGCCAAGAGAGAAATCCTATGGTTATCCCTGGGAACGCAGATCACCTACATCGGACTT
CAATTCATCAGCTTCCTCCTGCTACTAACAGACTTGCTACTCACTGGGAACCCTGCCTGTGGGCTCAAAC
TGAGCGCCTTTGCTGCTGTTTCCTCTGTCCTGTCAGGTCTCCTGGGGATGGTGGCCCACATGATGTATTC
ACAAGTCTTCCAAGCGACTGTCAACTTGGGTCCAGAAGACTGGAGACCACATGTTTGGAATTATGGCTGG
GCCTTCTACATGGCCTGGCTCTCCTTCACCTGCTGCATGGCGTCGGCTGTCACCACCTTCAACACGTACA
CCAGGATGGTGCTGGAGTTCAAGTGCAAGCATAGTAAGAGCTTCAAGGAAAACCCGAACTGCCTACCACA
TCACCATCAGTGTTTCCCTCGGCGGCTGTCAAGTGCAGCCCCCACCGTGGGTCCTTTGACCAGCTACCAC
CAGTATCATAATCAGCCCATCCACTCTGTCTCTGAGGGAGTCGACTTCTACTCCGAGCTGCGGAACAAGG
GATTTCAAAGAGGGGCCAGCCAGGAGCTGAAAGAAGCAGTTAGGTCATCTGTAGAGGAAGAGCAGTGTTA
G

Translation (326 aa):
MAKMELSKAFSGQRTLLSAILSMLSLSFSTTSLLSNYWFVGTQKVPKPLCEKGLAAKCFDMPVSLDGDTN
TSTQEVVQYNWETGDDRFSFRSFRSGMWLSCEETVEEPGERCRSFIELTPPAKREILWLSLGTQITYIGL
QFISFLLLLTDLLLTGNPACGLKLSAFAAVSSVLSGLLGMVAHMMYSQVFQATVNLGPEDWRPHVWNYGW
AFYMAWLSFTCCMASAVTTFNTYTRMVLEFKCKHSKSFKENPNCLPHHHQCFPRRLSSAAPTVGPLTSYH
QYHNQPIHSVSEGVDFYSELRNKGFQRGASQELKEAVRSSVEEEQC


Links Key
 Links to:   History report
  BLAST report
  Entrez Gene
  Nucleotide report
  Protein report
 Re-query CCDS DB by:   CCDS ID
  Gene ID
  Nucleotide ID
  Protein ID
 Genome Browser Links:   Ensembl Genome Browser
  NCBI Sequence Viewer
  UCSC Genome Browser
  VEGA Genome Browser

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