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Report for CCDS44675.1 (current version)

CCDS Status Species Chrom. Gene CCDS Release NCBI Annotation Release Ensembl Annotation Release Links
44675.1 Public Homo sapiens 11 PLEKHB1 24 110 108 CCDS HistoryNCBI Gene:58473Re-query CCDS DB by CCDS ID:44675.1Re-query CCDS DB by GeneID:58473See the combined annotation on chromosome 11 in Sequence Viewer

Public since: CCDS release 6, NCBI annotation release 37.1, Ensembl annotation release 55

Review status: Reviewed (by RefSeq and Havana)

Sequence IDs included in CCDS 44675.1

Original Current Source Nucleotide ID Protein ID MANE Status in CCDS Seq. Status Links
Original member Current member EBI ENST00000227214.10 ENSP00000227214.6 Accepted alive Link to Ensembl Transcript Viewer:ENST00000227214.10Link to Ensembl Protein Viewer:ENSP00000227214.6Re-query CCDS DB by Nucleotide ID:ENST00000227214Re-query CCDS DB by Protein ID:ENSP00000227214
Original member Current member EBI ENST00000535129.5 ENSP00000442616.1 Accepted alive Link to Ensembl Transcript Viewer:ENST00000535129.5Link to Ensembl Protein Viewer:ENSP00000442616.1Re-query CCDS DB by Nucleotide ID:ENST00000535129Re-query CCDS DB by Protein ID:ENSP00000442616
Original member Current member NCBI NM_001130035.2 NP_001123507.1 Accepted alive Link to Nucleotide Sequence:NM_001130035.2Link to Protein Sequence:NP_001123507.1Re-query CCDS DB by Nucleotide ID:NM_001130035Re-query CCDS DB by Protein ID:NP_001123507Link to BLAST:NP_001123507.1
Original member Current member NCBI NM_001130036.2 NP_001123508.1 Accepted alive Link to Nucleotide Sequence:NM_001130036.2Link to Protein Sequence:NP_001123508.1Re-query CCDS DB by Nucleotide ID:NM_001130036Re-query CCDS DB by Protein ID:NP_001123508Link to BLAST:NP_001123508.1

RefSeq Length Related UniProtKB/SwissProt Length Identity Gaps Mismatches
NP_001123507.1 189 Q9UF11-4 189 100% 0 0
NP_001123508.1 189 Q9UF11-4 189 100% 0 0

Chromosomal Locations for CCDS 44675.1

Assembly GRCh38.p14 (GCF_000001405.40)

On '+' strand of Chromosome 11 (NC_000011.10)
Genome Browser links: Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 11Link to Ensembl Genome Browser on chromosome 11See the combined annotation on chromosome 11 in Sequence Viewer

Chromosome Start Stop Links
11 73649051 73649087 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 11Link to Ensembl Genome Browser on chromosome 11
11 73650553 73650705 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 11Link to Ensembl Genome Browser on chromosome 11
11 73651788 73651890 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 11Link to Ensembl Genome Browser on chromosome 11
11 73652975 73653014 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 11Link to Ensembl Genome Browser on chromosome 11
11 73660753 73660852 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 11Link to Ensembl Genome Browser on chromosome 11
11 73661466 73661602 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 11Link to Ensembl Genome Browser on chromosome 11

CCDS Sequence Data
Blue highlighting indicates alternating exons.
Red highlighting indicates amino acids encoded across a splice junction.
 
Mouse over the nucleotide or protein sequence below and click on the highlighted codon or residue to select the pair.

Nucleotide Sequence (570 nt):
ATGGCCCTGGTGAGGGGCGGCTGGCTGTGGAGACAGAGCTCCATCCTCCGCCGCTGGAAGCGGAACTGGT
TTGCCCTGTGGCTGGACGGGACCCTGGGATACTACCACGATGAGACAGCGCAGGACGAGGAGGACCGTGT
GCTCATCCACTTCAATGTCCGTGACATAAAGATCGGCCCAGAGTGCCATGATGTGCAGCCCCCAGAGGGC
CGGAGCCGAGATGGCCTGCTGACTGTGAACCTACGGGAAGGCGGCCGCCTGCACCTCTGTGCGGAGACCA
AGGATGATGCCCTAGCATGGAAGACAGCACTGCTGGAGGCAAACTCCACCCCGGTGCGCGTCTACAGCCC
GTACCAAGACTACTACGAGGTGGTGCCCCCCAATGCACACGAGGCCACGTATGTCCGCAGCTACTACGGA
CCGCCCTACGCAGGCCCTGGCGTGACGCACGTGATAGTGCGGGAGGATCCCTGCTACAGCGCCGGCGCCC
CTCTGGCCATGGGCATGCTTGCGGGAGCCGCCACTGGGGCGGCGCTGGGCTCGCTCATGTGGTCGCCCTG
CTGGTTCTGA

Translation (189 aa):
MALVRGGWLWRQSSILRRWKRNWFALWLDGTLGYYHDETAQDEEDRVLIHFNVRDIKIGPECHDVQPPEG
RSRDGLLTVNLREGGRLHLCAETKDDALAWKTALLEANSTPVRVYSPYQDYYEVVPPNAHEATYVRSYYG
PPYAGPGVTHVIVREDPCYSAGAPLAMGMLAGAATGAALGSLMWSPCWF


Links Key
 Links to:   History report
  BLAST report
  Entrez Gene
  Nucleotide report
  Protein report
 Re-query CCDS DB by:   CCDS ID
  Gene ID
  Nucleotide ID
  Protein ID
 Genome Browser Links:   Ensembl Genome Browser
  NCBI Sequence Viewer
  UCSC Genome Browser
  VEGA Genome Browser

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