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Report for CCDS44659.1 (current version)

CCDS Status Species Chrom. Gene CCDS Release NCBI Annotation Release Ensembl Annotation Release Links
44659.1 Public Homo sapiens 11 PITPNM1 24 110 108 CCDS HistoryNCBI Gene:9600Re-query CCDS DB by CCDS ID:44659.1Re-query CCDS DB by GeneID:9600See the combined annotation on chromosome 11 in Sequence Viewer

Public since: CCDS release 6, NCBI annotation release 37.1, Ensembl annotation release 55

Review status: Reviewed (by RefSeq and Havana)

Sequence IDs included in CCDS 44659.1

Original Current Source Nucleotide ID Protein ID MANE Status in CCDS Seq. Status Links
Original member Current member EBI ENST00000436757.6 ENSP00000398787.2 Accepted alive Link to Ensembl Transcript Viewer:ENST00000436757.6Link to Ensembl Protein Viewer:ENSP00000398787.2Re-query CCDS DB by Nucleotide ID:ENST00000436757Re-query CCDS DB by Protein ID:ENSP00000398787
Original member Current member NCBI NM_001130848.2 NP_001124320.1 Accepted alive Link to Nucleotide Sequence:NM_001130848.2Link to Protein Sequence:NP_001124320.1Re-query CCDS DB by Nucleotide ID:NM_001130848Re-query CCDS DB by Protein ID:NP_001124320Link to BLAST:NP_001124320.1

RefSeq Length Related UniProtKB/SwissProt Length Identity Gaps Mismatches
NP_001124320.1 1243 O00562-2 1243 100% 0 0

Chromosomal Locations for CCDS 44659.1

Assembly GRCh38.p14 (GCF_000001405.40)

On '-' strand of Chromosome 11 (NC_000011.10)
Genome Browser links: Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 11Link to Ensembl Genome Browser on chromosome 11See the combined annotation on chromosome 11 in Sequence Viewer

Chromosome Start Stop Links
11 67492033 67492296 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 11Link to Ensembl Genome Browser on chromosome 11
11 67492934 67493062 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 11Link to Ensembl Genome Browser on chromosome 11
11 67493410 67493593 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 11Link to Ensembl Genome Browser on chromosome 11
11 67493688 67493837 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 11Link to Ensembl Genome Browser on chromosome 11
11 67493922 67494070 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 11Link to Ensembl Genome Browser on chromosome 11
11 67494244 67494360 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 11Link to Ensembl Genome Browser on chromosome 11
11 67494846 67494956 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 11Link to Ensembl Genome Browser on chromosome 11
11 67495077 67495225 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 11Link to Ensembl Genome Browser on chromosome 11
11 67495438 67495602 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 11Link to Ensembl Genome Browser on chromosome 11
11 67496178 67496345 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 11Link to Ensembl Genome Browser on chromosome 11
11 67497231 67497436 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 11Link to Ensembl Genome Browser on chromosome 11
11 67497522 67497679 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 11Link to Ensembl Genome Browser on chromosome 11
11 67497917 67498024 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 11Link to Ensembl Genome Browser on chromosome 11
11 67498133 67498322 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 11Link to Ensembl Genome Browser on chromosome 11
11 67498596 67498846 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 11Link to Ensembl Genome Browser on chromosome 11
11 67498940 67499001 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 11Link to Ensembl Genome Browser on chromosome 11
11 67499723 67499830 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 11Link to Ensembl Genome Browser on chromosome 11
11 67499914 67500009 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 11Link to Ensembl Genome Browser on chromosome 11
11 67500095 67500421 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 11Link to Ensembl Genome Browser on chromosome 11
11 67501862 67502086 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 11Link to Ensembl Genome Browser on chromosome 11
11 67502292 67502413 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 11Link to Ensembl Genome Browser on chromosome 11
11 67502504 67502718 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 11Link to Ensembl Genome Browser on chromosome 11
11 67504103 67504180 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 11Link to Ensembl Genome Browser on chromosome 11

CCDS Sequence Data
Blue highlighting indicates alternating exons.
Red highlighting indicates amino acids encoded across a splice junction.
 
Mouse over the nucleotide or protein sequence below and click on the highlighted codon or residue to select the pair.

Nucleotide Sequence (3732 nt):
ATGCTCATCAAGGAATACCACATTCTGCTGCCCATGAGCCTGGACGAGTACCAGGTGGCCCAGCTCTACA
TGATCCAGAAAAAGAGCCGGGAGGAGTCTAGTGGTGAGGGCAGCGGCGTGGAGATCCTGGCCAACCGGCC
CTACACGGATGGGCCCGGGGGCAGCGGGCAATACACACACAAGGTGTACCACGTGGGCTCCCACATCCCA
GGCTGGTTCCGGGCACTGCTGCCCAAGGCTGCCCTGCAGGTAGAAGAGGAATCCTGGAATGCCTACCCCT
ACACCCGAACCCGGTACACCTGCCCTTTCGTGGAGAAATTCTCCATTGAAATTGAGACCTATTACCTGCC
TGATGGGGGGCAGCAGCCAAACGTCTTCAACCTGAGCGGGGCCGAGAGGAGACAGCGCATCCTGGACACC
ATCGACATCGTGCGGGATGCAGTGGCCCCAGGCGAGTACAAAGCAGAAGAGGACCCCCGGCTTTATCACT
CGGTCAAGACGGGCCGAGGGCCACTGTCTGATGACTGGGCACGGACGGCGGCACAGACGGGGCCCCTTAT
GTGTGCCTATAAGCTGTGCAAGGTTGAGTTCCGCTACTGGGGCATGCAAGCCAAGATCGAGCAGTTCATC
CATGATGTAGGTCTGCGTCGGGTGATGCTGCGGGCCCACCGCCAGGCCTGGTGCTGGCAGGATGAGTGGA
CAGAGCTGAGCATGGCTGACATCCGGGCACTGGAAGAGGAGACTGCTCGCATGCTGGCCCAGCGCATGGC
CAAGTGCAACACAGGCAGTGAGGGGTCCGAGGCCCAGCCCCCCGGGAAACCGAGCACCGAGGCCCGGTCT
GCGGCCAGCAACACTGGCACCCCCGATGGGCCTGAGGCCCCCCCAGGCCCAGATGCCTCCCCCGATGCCA
GCTTTGGGAAGCAGTGGTCCTCATCCTCCCGTTCCTCCTACTCATCCCAACATGGAGGGGCTGTGTCTCC
CCAGAGCTTGTCTGAGTGGCGCATGCAGAACATTGCCCGAGACTCTGAGAACAGCTCCGAGGAAGAGTTC
TTTGATGCCCACGAAGGCTTCTCGGACAGTGAGGAGGTCTTCCCCAAGGAGATGACCAAGTGGAACTCCA
ATGACTTCATTGATGCCTTTGCCTCCCCAGTGGAGGCAGAGGGAACGCCAGAGCCTGGAGCCGAGGCAGC
TAAAGGCATTGAGGATGGGGCCCAAGCACCCAGGGACTCAGAGGGCCTGGATGGAGCCGGGGAGCTGGGG
GCTGAGGCATGCGCAGTCCACGCCCTCTTCCTTATCCTGCACAGCGGCAACATCCTGGACTCAGGCCCTG
GAGACGCCAACTCCAAGCAGGCGGATGTGCAGACGCTGAGCTCCGCCTTCGAGGCCGTCACCCGCATCCA
CTTCCCTGAGGCCTTGGGCCACGTGGCGCTGCGACTGGTGCCCTGTCCACCCATCTGCGCCGCCGCCTAT
GCCCTTGTCTCCAACCTGAGCCCTTACAGCCACGATGGGGACAGCCTGTCTCGCTCCCAAGACCACATTC
CACTGGCTGCCCTGCCACTGCTGGCCACCTCATCCTCCCGCTACCAGGGCGCCGTGGCCACCGTCATTGC
CCGCACCAACCAGGCCTACTCAGCCTTCCTGCGCTCACCTGAGGGTGCCGGCTTCTGTGGGCAGGTCGCA
CTGATTGGAGATGGTGTTGGTGGCATCCTGGGCTTTGATGCACTCTGCCACAGTGCTAACGCGGGCACCG
GGAGTCGGGGCAGCAGCCGCCGTGGGAGCATGAACAATGAGCTGCTCTCTCCGGAGTTTGGCCCAGTGCG
GGACCCCCTGGCAGATGGTGTGGAAGGCCTGGGTCGGGGCAGCCCAGAACCCTCGGCCTTGCCTCCCCAG
CGCATCCCCAGCGACATGGCCAGTCCTGAGCCCGAGGGCTCTCAGAACAGCCTTCAGGCAGCCCCCGCAA
CCACCTCCTCCTGGGAGCCCCGGCGGGCAAGCACGGCCTTCTGCCCACCCGCTGCCAGTTCCGAGGCACC
TGACGGCCCCAGCAGCACTGCCCGCCTTGACTTCAAGGTCTCTGGCTTCTTCCTCTTCGGCTCCCCACTG
GGCCTGGTGCTGGCTCTGCGCAAAACTGTGATGCCCGCCCTGGAGGCCCAGATGCGCCCAGCCTGTGAAC
AGATCTACAACCTCTTCCACGCGGCTGACCCCTGCGCCTCACGCCTCGAGCCCCTGCTGGCCCCGAAGTT
CCAGGCCATCGCCCCACTGACCGTGCCCCGCTACCAGAAGTTCCCCCTGGGAGATGGCTCATCCCTGCTG
CTGGCCGACACTCTGCAGACGCACTCCAGCCTCTTTCTGGAGGAGCTGGAGATGCTGGTGCCCTCAACAC
CCACCTCTACTAGCGGTGCCTTCTGGAAGGGCAGTGAGTTGGCCACTGACCCCCCGGCCCAGCCAGCCGC
CCCCAGCACCACCAGTGAGGTGGTTAAGATCCTGGAGCGCTGGTGGGGGACCAAGCGGATCGACTACTCG
CTGTACTGCCCCGAGGCGCTCACCGCCTTTCCCACCGTCACGCTGCCCCACCTCTTCCACGCCAGCTACT
GGGAGTCCGCCGACGTGGTGGCGTTCATCCTGCGCCAGGTGATCGAGAAGGAGCGGCCACAGCTGGCGGA
ATGCGAGGAGCCGTCCATCTACAGCCCGGCCTTCCCCAGGGAGAAGTGGCAGCGAAAACGCACGCAGGTC
AAGATCCGGAACGTCACTTCCAACCACCGGGCGAGCGACACGGTGGTGTGCGAGGGCCGCCCCCAGGTGC
TAAGCGGGCGCTTCATGTACGGGCCCCTGGACGTCGTCACGCTCACTGGAGAGAAGGTGGATGTCTACAT
CATGACGCAGCCGCTGTCGGGCAAGTGGATCCACTTTGGCACCGAAGTCACCAATAGCTCGGGCCGCCTC
ACCTTCCCAGTTCCCCCAGAACGCGCGCTGGGCATTGGTGTCTACCCCGTGCGCATGGTGGTCAGGGGCG
ACCACACCTATGCCGAATGCTGCCTGACTGTGGTGGCCCGCGGCACGGAGGCTGTGGTCTTCAGCATCGA
CGGCTCCTTCACCGCCAGCGTCTCCATCATGGGCAGCGACCCCAAGGTGCGAGCTGGCGCCGTGGACGTG
GTCAGGCACTGGCAGGACTCCGGCTACCTGATCGTGTATGTCACAGGCCGGCCGGATATGCAGAAGCACC
GCGTGGTGGCATGGCTGTCGCAGCACAACTTCCCCCACGGCGTCGTCTCCTTCTGCGACGGCCTCACCCA
CGACCCACTACGCCAGAAGGCAATGTTTCTGCAGAGCCTGGTGCAGGAGGTAGAACTGAACATCGTGGCC
GGTTATGGGTCTCCCAAAGATGTGGCTGTATACGCGGCGCTGGGGCTGTCCCCGAGCCAGACCTACATCG
TGGGCCGTGCCGTGCGGAAGCTACAGGCGCAGTGCCAGTTCCTGTCAGACGGCTATGTGGCCCACCTGGG
CCAGCTGGAAGCGGGCTCGCACTCGCATGCCTCCTCGGGACCCCCGAGAGCTGCCTTGGGCAAGAGCAGC
TATGGTGTGGCTGCCCCCGTGGACTTCCTGCGCAAACAGAGCCAGCTGCTTCGCTCGAGGGGCCCCAGCC
AGGCGGAGCGTGAGGGCCCGGGAACACCACCCACCACCCTGGCACGGGGCAAAGCACGGAGCATCAGCCT
GAAGCTGGACAGCGAGGAGTGA

Translation (1243 aa):
MLIKEYHILLPMSLDEYQVAQLYMIQKKSREESSGEGSGVEILANRPYTDGPGGSGQYTHKVYHVGSHIP
GWFRALLPKAALQVEEESWNAYPYTRTRYTCPFVEKFSIEIETYYLPDGGQQPNVFNLSGAERRQRILDT
IDIVRDAVAPGEYKAEEDPRLYHSVKTGRGPLSDDWARTAAQTGPLMCAYKLCKVEFRYWGMQAKIEQFI
HDVGLRRVMLRAHRQAWCWQDEWTELSMADIRALEEETARMLAQRMAKCNTGSEGSEAQPPGKPSTEARS
AASNTGTPDGPEAPPGPDASPDASFGKQWSSSSRSSYSSQHGGAVSPQSLSEWRMQNIARDSENSSEEEF
FDAHEGFSDSEEVFPKEMTKWNSNDFIDAFASPVEAEGTPEPGAEAAKGIEDGAQAPRDSEGLDGAGELG
AEACAVHALFLILHSGNILDSGPGDANSKQADVQTLSSAFEAVTRIHFPEALGHVALRLVPCPPICAAAY
ALVSNLSPYSHDGDSLSRSQDHIPLAALPLLATSSSRYQGAVATVIARTNQAYSAFLRSPEGAGFCGQVA
LIGDGVGGILGFDALCHSANAGTGSRGSSRRGSMNNELLSPEFGPVRDPLADGVEGLGRGSPEPSALPPQ
RIPSDMASPEPEGSQNSLQAAPATTSSWEPRRASTAFCPPAASSEAPDGPSSTARLDFKVSGFFLFGSPL
GLVLALRKTVMPALEAQMRPACEQIYNLFHAADPCASRLEPLLAPKFQAIAPLTVPRYQKFPLGDGSSLL
LADTLQTHSSLFLEELEMLVPSTPTSTSGAFWKGSELATDPPAQPAAPSTTSEVVKILERWWGTKRIDYS
LYCPEALTAFPTVTLPHLFHASYWESADVVAFILRQVIEKERPQLAECEEPSIYSPAFPREKWQRKRTQV
KIRNVTSNHRASDTVVCEGRPQVLSGRFMYGPLDVVTLTGEKVDVYIMTQPLSGKWIHFGTEVTNSSGRL
TFPVPPERALGIGVYPVRMVVRGDHTYAECCLTVVARGTEAVVFSIDGSFTASVSIMGSDPKVRAGAVDV
VRHWQDSGYLIVYVTGRPDMQKHRVVAWLSQHNFPHGVVSFCDGLTHDPLRQKAMFLQSLVQEVELNIVA
GYGSPKDVAVYAALGLSPSQTYIVGRAVRKLQAQCQFLSDGYVAHLGQLEAGSHSHASSGPPRAALGKSS
YGVAAPVDFLRKQSQLLRSRGPSQAEREGPGTPPTTLARGKARSISLKLDSEE


Links Key
 Links to:   History report
  BLAST report
  Entrez Gene
  Nucleotide report
  Protein report
 Re-query CCDS DB by:   CCDS ID
  Gene ID
  Nucleotide ID
  Protein ID
 Genome Browser Links:   Ensembl Genome Browser
  NCBI Sequence Viewer
  UCSC Genome Browser
  VEGA Genome Browser

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