NCBI CCDS banner
PubMed Entrez Gene BLAST OMIM
  

CCDS
Home
FTP
Process
Releases & Statistics

Collaborators
EBI
HGNC
MGI
NCBI

Contact Us
email CCDS

Genome Displays

Ensembl
NCBI
UCSC
VEGA

Related Resources
Gene
HomoloGene
MANE
RefSeq


Report for CCDS44576.1 (current version)

CCDS Status Species Chrom. Gene CCDS Release NCBI Annotation Release Ensembl Annotation Release Links
44576.1 Public Homo sapiens 11 CRY2 24 110 108 CCDS HistoryNCBI Gene:1408Re-query CCDS DB by CCDS ID:44576.1Re-query CCDS DB by GeneID:1408See the combined annotation on chromosome 11 in Sequence Viewer

Public since: CCDS release 6, NCBI annotation release 37.1, Ensembl annotation release 55

Review status: Reviewed (by RefSeq and Havana)

Sequence IDs included in CCDS 44576.1

Original Current Source Nucleotide ID Protein ID MANE Status in CCDS Seq. Status Links
Original member Current member EBI ENST00000417225.6 ENSP00000397419.2 Accepted alive Link to Ensembl Transcript Viewer:ENST00000417225.6Link to Ensembl Protein Viewer:ENSP00000397419.2Re-query CCDS DB by Nucleotide ID:ENST00000417225Re-query CCDS DB by Protein ID:ENSP00000397419
Original member Current member NCBI NM_001127457.3 NP_001120929.1 Accepted alive Link to Nucleotide Sequence:NM_001127457.3Link to Protein Sequence:NP_001120929.1Re-query CCDS DB by Nucleotide ID:NM_001127457Re-query CCDS DB by Protein ID:NP_001120929Link to BLAST:NP_001120929.1

RefSeq Length Related UniProtKB/SwissProt Length Identity Gaps Mismatches
NP_001120929.1 532 Q49AN0-2 532 100% 0 0

Chromosomal Locations for CCDS 44576.1

Assembly GRCh38.p14 (GCF_000001405.40)

On '+' strand of Chromosome 11 (NC_000011.10)
Genome Browser links: Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 11Link to Ensembl Genome Browser on chromosome 11See the combined annotation on chromosome 11 in Sequence Viewer

Chromosome Start Stop Links
11 45847250 45847281 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 11Link to Ensembl Genome Browser on chromosome 11
11 45855982 45856090 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 11Link to Ensembl Genome Browser on chromosome 11
11 45858731 45858873 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 11Link to Ensembl Genome Browser on chromosome 11
11 45860848 45861032 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 11Link to Ensembl Genome Browser on chromosome 11
11 45862060 45862148 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 11Link to Ensembl Genome Browser on chromosome 11
11 45867612 45867752 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 11Link to Ensembl Genome Browser on chromosome 11
11 45869506 45869817 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 11Link to Ensembl Genome Browser on chromosome 11
11 45870053 45870204 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 11Link to Ensembl Genome Browser on chromosome 11
11 45870330 45870532 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 11Link to Ensembl Genome Browser on chromosome 11
11 45870842 45870934 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 11Link to Ensembl Genome Browser on chromosome 11
11 45872092 45872231 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 11Link to Ensembl Genome Browser on chromosome 11

CCDS Sequence Data
Blue highlighting indicates alternating exons.
Red highlighting indicates amino acids encoded across a splice junction.
 
Mouse over the nucleotide or protein sequence below and click on the highlighted codon or residue to select the pair.

Nucleotide Sequence (1599 nt):
ATGCCAGCTCCACCCGGGCGGACCCACACATGGTTCCTACTTCAGTCTCTGGAAGATTTGGACACAAGTT
TAAGGAAACTGAACTCCCGCCTGTTTGTAGTCCGGGGACAGCCAGCCGACGTGTTCCCAAGGCTGTTCAA
GGAATGGGGAGTGACCCGCTTGACCTTTGAATATGACTCTGAACCCTTTGGGAAAGAACGGGATGCAGCC
ATCATGAAGATGGCCAAGGAGGCTGGTGTGGAAGTAGTGACGGAGAATTCTCATACCCTCTATGACCTGG
ACAGGATCATTGAGCTGAATGGGCAGAAGCCACCCCTTACATACAAGCGCTTTCAGGCCATCATCAGCCG
CATGGAGCTGCCCAAGAAGCCAGTGGGCTTGGTGACCAGCCAGCAGATGGAGAGCTGCAGGGCCGAGATC
CAGGAGAACCACGACGAGACCTACGGCGTGCCCTCCCTGGAGGAGCTGGGGTTCCCCACTGAAGGACTTG
GTCCAGCTGTCTGGCAGGGAGGAGAGACAGAAGCTCTGGCCCGCCTGGATAAGCACTTGGAACGGAAGGC
CTGGGTTGCCAACTATGAGAGACCCCGAATGAACGCCAACTCCCTCCTGGCCAGCCCCACAGGCCTCAGC
CCCTACCTGCGCTTTGGTTGTCTCTCCTGCCGCCTCTTCTACTACCGCCTGTGGGACCTGTATAAAAAGG
TGAAGCGGAACAGCACACCTCCCCTCTCCCTATTTGGGCAACTCCTATGGCGAGAGTTCTTCTACACGGC
AGCTACCAACAACCCCAGGTTTGACCGCATGGAGGGGAACCCCATCTGCATCCAGATCCCCTGGGACCGC
AATCCTGAGGCCCTGGCCAAGTGGGCTGAGGGCAAGACAGGCTTCCCTTGGATTGATGCCATCATGACCC
AACTGAGGCAGGAGGGCTGGATCCACCACCTGGCCCGGCATGCCGTGGCCTGCTTCCTGACCCGCGGGGA
CCTCTGGGTCAGCTGGGAGAGCGGGGTCCGGGTATTTGATGAGCTGCTCCTGGATGCAGATTTCAGCGTG
AACGCAGGCAGCTGGATGTGGCTGTCCTGCAGTGCTTTCTTCCAGCAGTTCTTCCACTGCTACTGCCCTG
TGGGCTTTGGCCGTCGCACGGACCCCAGTGGGGACTACATCAGGCGATACCTGCCCAAATTGAAAGCGTT
CCCCTCTCGATACATCTATGAGCCCTGGAATGCCCCAGAGTCAATTCAGAAGGCAGCCAAGTGCATCATT
GGTGTGGACTACCCACGGCCCATCGTCAACCATGCCGAGACCAGCCGGCTTAACATTGAACGAATGAAGC
AGATTTACCAGCAGCTTTCGCGCTACCGGGGACTCTGTCTACTGGCATCTGTCCCTTCCTGTGTGGAAGA
CCTCAGTCACCCTGTGGCAGAGCCCAGCTCGAGCCAGGCTGGCAGCATGAGCAGTGCAGGCCCAAGACCA
CTACCCAGTGGCCCAGCATCCCCCAAACGCAAGCTGGAAGCAGCCGAGGAACCACCTGGTGAAGAACTCA
GCAAACGGGCCCGGGTGGCAGAGTTGCCAACCCCAGAGCTGCCGAGCAAGGATGCCTGA

Translation (532 aa):
MPAPPGRTHTWFLLQSLEDLDTSLRKLNSRLFVVRGQPADVFPRLFKEWGVTRLTFEYDSEPFGKERDAA
IMKMAKEAGVEVVTENSHTLYDLDRIIELNGQKPPLTYKRFQAIISRMELPKKPVGLVTSQQMESCRAEI
QENHDETYGVPSLEELGFPTEGLGPAVWQGGETEALARLDKHLERKAWVANYERPRMNANSLLASPTGLS
PYLRFGCLSCRLFYYRLWDLYKKVKRNSTPPLSLFGQLLWREFFYTAATNNPRFDRMEGNPICIQIPWDR
NPEALAKWAEGKTGFPWIDAIMTQLRQEGWIHHLARHAVACFLTRGDLWVSWESGVRVFDELLLDADFSV
NAGSWMWLSCSAFFQQFFHCYCPVGFGRRTDPSGDYIRRYLPKLKAFPSRYIYEPWNAPESIQKAAKCII
GVDYPRPIVNHAETSRLNIERMKQIYQQLSRYRGLCLLASVPSCVEDLSHPVAEPSSSQAGSMSSAGPRP
LPSGPASPKRKLEAAEEPPGEELSKRARVAELPTPELPSKDA


Links Key
 Links to:   History report
  BLAST report
  Entrez Gene
  Nucleotide report
  Protein report
 Re-query CCDS DB by:   CCDS ID
  Gene ID
  Nucleotide ID
  Protein ID
 Genome Browser Links:   Ensembl Genome Browser
  NCBI Sequence Viewer
  UCSC Genome Browser
  VEGA Genome Browser

Disclaimer | Write to the Help Desk
NCBI | NLM | NIH