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Report for CCDS44452.1 (current version)

CCDS Status Species Chrom. Gene CCDS Release NCBI Annotation Release Ensembl Annotation Release Links
44452.1 Public Homo sapiens 10 NUTM2A 24 110 108 CCDS HistoryNCBI Gene:728118Re-query CCDS DB by CCDS ID:44452.1Re-query CCDS DB by GeneID:728118See the combined annotation on chromosome 10 in Sequence Viewer

Public since: CCDS release 6, NCBI annotation release 37.1, Ensembl annotation release 55

Review status: Reviewed (by RefSeq and Havana)

Sequence IDs included in CCDS 44452.1

Original Current Source Nucleotide ID Protein ID MANE Status in CCDS Seq. Status Links
Original member Current member EBI ENST00000381707.6 ENSP00000371126.1 MANE Select Accepted alive Link to Ensembl Transcript Viewer:ENST00000381707.6Link to Ensembl Protein Viewer:ENSP00000371126.1Re-query CCDS DB by Nucleotide ID:ENST00000381707Re-query CCDS DB by Protein ID:ENSP00000371126
Original member Current member NCBI NM_001099338.2 NP_001092808.1 MANE Select Accepted alive Link to Nucleotide Sequence:NM_001099338.2Link to Protein Sequence:NP_001092808.1Re-query CCDS DB by Nucleotide ID:NM_001099338Re-query CCDS DB by Protein ID:NP_001092808Link to BLAST:NP_001092808.1

RefSeq Length Related UniProtKB/SwissProt Length Identity Gaps Mismatches
NP_001092808.1 878 Q8IVF1-1 878 100% 0 0

Chromosomal Locations for CCDS 44452.1

Assembly GRCh38.p14 (GCF_000001405.40)

On '+' strand of Chromosome 10 (NC_000010.11)
Genome Browser links: Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 10Link to Ensembl Genome Browser on chromosome 10See the combined annotation on chromosome 10 in Sequence Viewer

Chromosome Start Stop Links
10 87225831 87226212 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 10Link to Ensembl Genome Browser on chromosome 10
10 87228263 87228962 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 10Link to Ensembl Genome Browser on chromosome 10
10 87230920 87231048 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 10Link to Ensembl Genome Browser on chromosome 10
10 87232021 87232160 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 10Link to Ensembl Genome Browser on chromosome 10
10 87232603 87232985 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 10Link to Ensembl Genome Browser on chromosome 10
10 87233473 87233589 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 10Link to Ensembl Genome Browser on chromosome 10
10 87233923 87234708 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 10Link to Ensembl Genome Browser on chromosome 10

CCDS Sequence Data
Blue highlighting indicates alternating exons.
Red highlighting indicates amino acids encoded across a splice junction.
 
Mouse over the nucleotide or protein sequence below and click on the highlighted codon or residue to select the pair.

Nucleotide Sequence (2637 nt):
ATGGAAGTAAAGGGGCCATCAGGTAGAAGCTTTTGCTGTGAGTCAGAAGGACAATTTAAAAGTTGCCTAA
AGAGGCACACGCCATCTCTGCTGCTGCCTTCCAGTTGGAAGGGAAACTCAGGTTCTTGCCTAATGGCCAA
AGCCCTTCACAGAATGTCCCCCACCCCTAACAGCTGCCCACTGCCCCTCCCCCTCTGCAGAATGTCTGGG
GTCCTATGTTCCAGGAACCTGTTTACTTTCAAATTTTCCCTGTTTCAGTTGGACTCAGGAGCATCTGGTG
AGCCAGGTCACTCTCTGGGTCTTACCCTTGGCTTTTCTCATTGCGGAAACTGCCAGACAGCGGTGGTCAG
TGCCCAGCCTGAGGGGATGGCTTCAAATGGAGCATACCCAGCGCTGGGACCGGGCGTGACCGCGAACCCT
GGCACCTCCCTGTCTGTGTTCACGGCTCTGCCCTTCACCACACCCGCTCCCGGCCCAGCACACGGGCCGC
TCCTTGTGACTGCAGGGGCTCCTCCAGGCGGCCCTCTGGTGCTGTCTACCCTCCCCAGCACACCTCTGGT
GACAGAACAGGATGGCTGCGGCCCGAGTGGGGCCGGGGCTTCCAACGTCTTTGTCCAGATGAGGACAGAG
GTGGGGCCTGTGAAGGCCGCTCAGGCGCAGACCTTGGTCCTAACTCAGGCCCCCCTCGTCTGGCAGGCTC
CAGGCGCCCTCTGCGGAGGTGTTGTGTGTCCACCTCCCCTACTCCTGGCAGCTGCTCCTGTGGTGCCTGT
TATGGCTGCCCAGGTGGTTGGGGGCACCCAGGCCTGTGAGGGAGGCTGGTCCCAGGGCCTTCCTCTTCCA
CCACCACCACCACCGGCTGCCCAGCTGCCCCCCATTGTGTCCCAAGGGAATGCTGGGCCATGGCCACAAG
GGGCTCACGGAGAGGGCAGCCTGGCTTCCTCCCAGGCCAAGGCCCCGCCAGATGACTCCTGTAACCCCAG
GAGTGTCTATGAGAACTTCCGACTCTGGCAGCACTACAAGCCCCTGGCCCGGAGGCACCTTCCCCAGAGT
CCTGACACCGAAGCGCTTTCGTGCTTCCTCATCCCAGTTCTCCGATCCCTGGCCCGGCGGAAGCCCACCA
TGACCCTGGAGGAGGGACTGTGGCGGGCCATGCGGGAATGGCAGCACACGAGCAACTTTGACCGGATGAT
CTTCTACGAGATGGCGGAAAAGTTCCTGGAGTTTGAGGCTGAGGAGGAGATGCAGATTCAGAAATCGCAA
TGGATGAAGGGGCCCCAGTGCCTGCCTCCTCCAGCCACACCGAGGCTTGAACCTCGAGGACCCCCGGCCC
CTGAGGTGGTCAAGCAGCCAGTGTACCTTCCCAGCAAGGCCGGCCCCAAGGCCCCGACTGCCTGCCTGCC
ACCACCCAGGCCCCAGAGGCCAGTGACCAAGGCCCGCCGGCCACCACCCCGGCCCCACCGGCGAGCAGAG
ACCAAGGCCCGCCTGCCACCACCCAGGCCCCAGAGACCAGCAGAGACCAAGGTCCCTGAGGAGATCCCCC
CAGAAGTGGTGCAGGAGTATGTGGACATCATGGAGGAGCTGCTGGGGCCTTCCCTCGGGGCCACGGGGGA
GCCCGAGAAACAACGGGAAGAGGGCGAAGTGAAGCAGCCACAGGAAGAGGACTGGACGCCCCCAGACCCG
GGCCTCCTGAGCTACACTGACAAGCTGTGTTCCCAGAAAGACTTCGTCACCAAGGTGGAGGCCGTCATTC
ATCCCCAATTCCTGGAAGAATTGCTTTCCCCAGATCCACAGATGGATTTCTTGGCCCTAAGCCAGGAGCT
GGAGCAGGAGGAAGGACTCACCCTTGCCCAGCTAGTGGAGAAGCGCCTCCTACCCTTGAAGGAGAAACAG
CATGCGAGGGCAGCCCCTAGTCGTGGCACAGCCCGGTTGGACTCAAGTTCTTCTAAGTTTGCAGCTGGCC
AAGGAGCAGAGAGAGACGTCCCTGTCCCCCAACAAGGGGTTGGCATGGAAACCTGCCCACCCCAGACGAC
TGCCCGGGACTCTCAGGGACGAGGCAGAGCACACACTGGCATGGCCAGGTCCAAAGACTCTGTTGTGCTT
TTGGGATGTCAGGATTCCCCTGGGCTGAGGGCTGCCCGGCCAACCTCTCCTCCCCAGGACCACAGACCCA
CCTGCCCTGGCGTGGGTACCAAGGATGCCTTGGATCTCCCTGGAGGGTCTCCTGTCAGGGAGTCACATGG
GCTGGCTCAGGGGTCAAGTGAGGAGGAGGAACTCCCCAGCCTGGCCTTCCTCTTGGGTTCCCAGCACAAG
CTTCTGCCCTGGTGGCTACCCCAGAGCCCTGTCCCTGCCTCGGGCCTTCTCAGCCCAGAAAAGTGGGGAC
CCCAGGGAACTCATCAGTTCCCATCTGCTGAGAGAAGAGGCCTCAACCTAGCACCTTCTCCTGCCAACAA
GGCCAAGAAGCGACCTCTCTTTGGAAGCCTGTCCCCTGCTGAAAAGACACCCCACCCAGGGCCTGGGCTC
AGGGTCTCTGGGGAGCAATCCCTGACTTGGGGGCTGGGTGGCCCCTCACAGTCTCAAAAGAGAAAGGGTG
ACCCCTTGGTCTCCAGGAAGGAGAAGAAGCAGCGTTGTAGCCAGTAG

Translation (878 aa):
MEVKGPSGRSFCCESEGQFKSCLKRHTPSLLLPSSWKGNSGSCLMAKALHRMSPTPNSCPLPLPLCRMSG
VLCSRNLFTFKFSLFQLDSGASGEPGHSLGLTLGFSHCGNCQTAVVSAQPEGMASNGAYPALGPGVTANP
GTSLSVFTALPFTTPAPGPAHGPLLVTAGAPPGGPLVLSTLPSTPLVTEQDGCGPSGAGASNVFVQMRTE
VGPVKAAQAQTLVLTQAPLVWQAPGALCGGVVCPPPLLLAAAPVVPVMAAQVVGGTQACEGGWSQGLPLP
PPPPPAAQLPPIVSQGNAGPWPQGAHGEGSLASSQAKAPPDDSCNPRSVYENFRLWQHYKPLARRHLPQS
PDTEALSCFLIPVLRSLARRKPTMTLEEGLWRAMREWQHTSNFDRMIFYEMAEKFLEFEAEEEMQIQKSQ
WMKGPQCLPPPATPRLEPRGPPAPEVVKQPVYLPSKAGPKAPTACLPPPRPQRPVTKARRPPPRPHRRAE
TKARLPPPRPQRPAETKVPEEIPPEVVQEYVDIMEELLGPSLGATGEPEKQREEGEVKQPQEEDWTPPDP
GLLSYTDKLCSQKDFVTKVEAVIHPQFLEELLSPDPQMDFLALSQELEQEEGLTLAQLVEKRLLPLKEKQ
HARAAPSRGTARLDSSSSKFAAGQGAERDVPVPQQGVGMETCPPQTTARDSQGRGRAHTGMARSKDSVVL
LGCQDSPGLRAARPTSPPQDHRPTCPGVGTKDALDLPGGSPVRESHGLAQGSSEEEELPSLAFLLGSQHK
LLPWWLPQSPVPASGLLSPEKWGPQGTHQFPSAERRGLNLAPSPANKAKKRPLFGSLSPAEKTPHPGPGL
RVSGEQSLTWGLGGPSQSQKRKGDPLVSRKEKKQRCSQ


Links Key
 Links to:   History report
  BLAST report
  Entrez Gene
  Nucleotide report
  Protein report
 Re-query CCDS DB by:   CCDS ID
  Gene ID
  Nucleotide ID
  Protein ID
 Genome Browser Links:   Ensembl Genome Browser
  NCBI Sequence Viewer
  UCSC Genome Browser
  VEGA Genome Browser

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