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Report for CCDS44387.1 (current version)

CCDS Status Species Chrom. Gene CCDS Release NCBI Annotation Release Ensembl Annotation Release Links
44387.1 Public Homo sapiens 10 C10orf71 24 110 108 CCDS HistoryNCBI Gene:118461Re-query CCDS DB by CCDS ID:44387.1Re-query CCDS DB by GeneID:118461See the combined annotation on chromosome 10 in Sequence Viewer

Public since: CCDS release 6, NCBI annotation release 37.1, Ensembl annotation release 55

Review status: Reviewed (by RefSeq and Havana)

Sequence IDs included in CCDS 44387.1

Original Current Source Nucleotide ID Protein ID MANE Status in CCDS Seq. Status Links
Original member Current member EBI ENST00000374144.8 ENSP00000363259.3 MANE Select Accepted alive Link to Ensembl Transcript Viewer:ENST00000374144.8Link to Ensembl Protein Viewer:ENSP00000363259.3Re-query CCDS DB by Nucleotide ID:ENST00000374144Re-query CCDS DB by Protein ID:ENSP00000363259
Original member Current member NCBI NM_001135196.2 NP_001128668.1 MANE Select Accepted alive Link to Nucleotide Sequence:NM_001135196.2Link to Protein Sequence:NP_001128668.1Re-query CCDS DB by Nucleotide ID:NM_001135196Re-query CCDS DB by Protein ID:NP_001128668Link to BLAST:NP_001128668.1

RefSeq Length Related UniProtKB/SwissProt Length Identity Gaps Mismatches
NP_001128668.1 1435 Q711Q0-1 1435 100% 0 0

Chromosomal Locations for CCDS 44387.1

Assembly GRCh38.p14 (GCF_000001405.40)

On '+' strand of Chromosome 10 (NC_000010.11)
Genome Browser links: Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 10Link to Ensembl Genome Browser on chromosome 10See the combined annotation on chromosome 10 in Sequence Viewer

Chromosome Start Stop Links
10 49322546 49326853 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 10Link to Ensembl Genome Browser on chromosome 10

CCDS Sequence Data
Blue highlighting indicates alternating exons.
Red highlighting indicates amino acids encoded across a splice junction.
 
Mouse over the nucleotide or protein sequence below and click on the highlighted codon or residue to select the pair.

Nucleotide Sequence (4308 nt):
ATGATGCAAGGAAATAAGAAGTGCACAGACGCGTTCAGCGACTCCTCCAGCATCGGCAGCGTGTTGGATG
AT
GCAGACAGGGAGGTGAGCAGCCTAACAGACCGGGCATTCCGGAGTTTGTGCATCTCCGAGGACACATC
C
TTCCATGACTCCTATCTGGCTGTGTCCCCGGATATCACCCGACAGGTGTTTGGGACTTTTCACCAGAGA
ACA
GTGGGCCACACCCAGAGGAAAAGTGGCATTTGGAGCCAGTTACCGTCACAGGGCACGGAACATTCGG
GC
TGGGCGGCCACCTTCCAACAGCTACCCAAGTACGTTCAGGGAGAGGAAAAGTACCCCAAAACCAGCCC
C
CCACCAACGCCAGTCCAGAGGAGACTGGAGGTGCCAGTTTCCGGCCTAAGGAGCAGCAATAAGCCTGTC
TCC
AAAGTATCAACACTAATTAAATCTTTCGACAGGACCGAGAGCCAACGTTGTGAGAGCAGGCCCACTG
CC
AGCAAGCCTCCGGCTCTGAAAAATCCTCCCAAATTCGCTCCTCTTCCAGAAAACAGTGTCAACTTCTG
C
TTCGATTCTGCCTTTCTGACAGTCAGGAGGGTGCCCGCTGAAGTTTCCAACACCCATCAGAACAGCTAC
CAG
CCAGGCAGGAAGCACGGAGAACAGGAGTCCTCCAAGAATCCAGAAATGGCCTGTCACGGCTCCAGCA
GC
TTCCTCCCAGCAGCCAATGACACGGCCACCTTATGTGAGTCAAAGTTCCCCTCTCCACACCACAAGCC
A
GTCACGGGTGAGCCTGGGAGAGGCAAAGGTACCTTTCTGCACAGTGAAAATAGTGCTTTTGAGTCATGG
AAT
GCCCACCAACCAAAGCTGCTGGAGAGAAAGGACACAGCTGGAACCGTCCCAGAAAGCAAAGCTCCCA
AG
CACTATGGGGACACGACCTTGCTAAGAGAACCCTGTCCTCCTGAGCGCACAGTCTCTCCCTGCCAGGT
C
CAGGCCAGCTGCAGTCAGGAAGAGAACAGACTTGCAGCAGGGGCTCTGTCCACATCTATACCCTGGGGG
TGC
AGGGATCCAGGAGCCCAGGTATTTGCTGTGGAAGGAAAAGCTCCCAGCTCACAACCTGATTCTCAAG
AG
AAGCCAGCCCAGCCCCCATGGAGGAAGCCAAAGACTGGCAAAAAAGGGAAAGAAAGTCTACAAGATAC
T
TTAGAAGAAAAGACACAGACCAACCAGAGAGGCCCACCTTTGTATACAAAACACAACCCCCAGGAACAG
TTT
TCAGAAAACAATGCTCTTGACCTGCCTGTGGAACCCAATGAACATTATGATCCCCCCTTTAACATCA
GT
AAGCTCCTGACCCCCATCATACCCAGCAAGCACGCCCTGGATTCAGCAGACAGCCAGCCAGCAGAGCG
A
ACCCCATCACCCCCAGGACAGCTAAACGGATACCAAGAGAAGGAGCCCAGTGAATGTCAGTCTCGAGAC
AGC
TACAAGTCCAAAGCCCCTAGCCTGCTGTTCAACCTCAAGGACGTGCGGAAGCGTGTTAAGAGCACAT
AC
AGTTCCTCACCTCTCTTGAAAGTGCTTGATGAGAAAACTAGAGGTAAGGTTGATGGAAAGCAAGAACC
T
GTGAGCAACGGTGTCATCCTCCCCAATGGGCTTGAGGAAAGCCCTCCAAATGAGCTTTCTAAGGAGAGA
CCC
GCTGATGACCCCACTGCATCACACATCAATCCCCAGAAGGACCCTACAGCTGACCCCAGTGAGCCCT
CT
GCAGACAGCTATCTAACTCTTAGCACAGCTCCGACTATCGCCAAAGCCCCCTTCTATGTCAATGGGGA
G
GCTGCTGAGAGAAGCAGTTATGAGAACAAGGAGGTGGAAGGAGAGTTGGAGATGGGTCCTGCCGGATCC
AGC
TGGTGTCCAGACTCCAGGGAACACCGCCCCAGGAAACACCTCTCCCTGAGGCTTTGCAATAGGGATC
CT
GAGCCTGGAGGGGCTACAGAGAAAATGAAGACCCACCAGCTAGAGAATGGGCTCTCCAGATCTGTGTC
C
CAAGAGACAGAACCTGAGAGGGAAGCAGGACTTCAGAACACACATTTGAACCAGAAATTCTTCCCAGGG
CCC
CTCTCTCCTGAGGAGGAAGATGTGTTTTACAGTGACAGCCAATCCGATTTTATGCCAAGCCTCAAAG
GT
AAGGCCAAATTCAGCACCAGCTCTTCAGATCAATCCTTTGCCTCATTTGATGATCAGCAGAAGATGTG
G
TTTACTGAGAACCAGCGGGAAGACAGGAGGAAGGATGTGAGTGCAGGTGACAGTCAGAAGGATGAGAAG
GAG
AATGTGATGCGGAAGGATGAGCTGCAGTACTGTGCCTTAAGCAATGGGCACGCATGCCTGGAAAACC
GC
AGCCAGGGGGAAGCATTGCAAAGAGAAAGGGAAAGTGTGTCTGGAGGAAGAACCAGGAAGGCATCAGC
A
GAGGAAGCTAATTTCAGAGGCTCTTGGATTGGGGAAAATAAGGGCACAACCTTTTCACAGGCCAAAGAC
CTT
ACTCCCTCACCATCTTCTGCTTCAAACAGGCACATGCTGTTTACGATTAAAGACAACACCCTCAGAG
CT
ACCCCCGTAATTAAACCTATCATGCTGCCTCTCCTGAGGACCATGTCCTTGGAGGACTCCCTCAGCAG
T
GGCCACAAAGAGGAGGAATTGCCAAGGCCAGAATGGGGTGAGGATCCTGGGTTTTGTGCCCCCGAAAAC
CAG
GACATTCTTGGTACATCGACACCCACTAACACACGGGGCACACGTGTGAAGTGCATGGCCAACGAGG
TC
ATGGAGGACCCTGGGCAGGGGTCGAGCATGGCCAGGATGGAGGCCTCTCAGCCAGCCCCAAAGGGGAA
T
TTCCCATCTATGCCTCTGGTGGGAGAGGGGGACCGGGTGAAGGCACCACCAGATGCTGCACCTGGCCTC
GTG
GCAAGCAATTGCAAGAGCGGTTCTGCAGACTCAGGGAAGCTGGCAGCCCCATGGCACATCCCCACCA
TT
GCTTTACCCGAGGGTGACATAGAAGACCAGCCACCCCCATGGCAGCCCGAAAACTGTTGGGAAGAGCA
A
ACACCAGGTTTCAAGAGTCACTTTTTGTCCACACCCAGAGCAGGGCCCCCTGGCAGAAGACTGGTCCCC
AGT
GAGAGGGCGAATTCCCCCAACCCCGGCTCCCCCGGGGAGAGCAGTGCCTGCTCCCCTGCTGCCAGCA
AC
ATTTGGGAGGAGTCTTCCCAGGCCCCTGGAGGACCAGAGCTGCTTCCCGAGGAGCCTAATCAAGCCAG
C
CCCTGGGCCAGCTCCAGTCCTGCCAGGGTCACCCGGAGGGAGGACCTGACCCACGCCCTCGTGTGGGAG
GGC
GGCTCTGACCCCCTACTTGAGCTGTCGGCAGAAGACCTCCGGACCCTCTCTCCAAGAGGTTCATTGC
TG
GATGTGGCCACCAGCCCAGCAGGCACCTCTGGGAGACTTGAGCTTCCTGCACAGCTAGAGAGGACAGC
A
AGCAAGCCACCTGCAGTCCCACCCAAAACAGAGAAAGCCCTGCGGCGGGCAAAGAAGCTGGCAAGTAAG
AGG
AGGAAGACGGATCAGGCTCAGGAGAAGCATGGCGAGTCACAGGAGGGAAAGCCCTGCCCGGAGGACT
TG
GAGCAGACACAGCAAAGGCCGCTGTGCCCCAGAGAGAGGCCCCGACACAATTTCCCCGTGGTCCGTTC
C
CTGCCCCCTCCCGTGCACCGCCACTCCGTGTCCGGCTTCTCGGAGCCTGTCGGGAGGCGGCCCGGGGGC
CCC
CAGTCCCTCACACCCCTGCCCGCGTACCCCGCCACCCAGAAGGTCCTCCAGGATCCGCAGTCCGGGG
AG
TACTTTGTCTTCGACTTGCCACTCCAGGTGAAAATCAAGACCTTCTATGACCCAGAGACGGGCAAGTA
T
GTCAAGGTCTCCATCCCGTCCTCCGAGGGGGCCTCCCCAGAGCCGCCCCCACCGGACGCCCTGGCCGCT
CCC
TATGTGCTGTACCCCGGCTTCCAGCCAGTGCCCGTGACGGCCTTGATGCCGCTGCGCTGCTCCTCTC
AG
CTCTCCGCGCCCACCTTCCTCAGGCAGGGCCCTCGTGCCTCCGCGGCCCGCGCCAGGACCCAGAGTGT
C
CACGAGTCTGGACTACAGCTGGACCCAGGGCCTCACGGTGACTGCACCCCGCACTCTGCAGGCCAGCGC
CCT
CATGGTCCTCCCCAGAGCCCAGGAGAGGAGGGTGTAGAAGCTCCAGGCCTGGGCATCATCTCCACTG
AT
GACCTAGAGGACTTTGCCACAGAAGGCATTTCTTGA


Translation (1435 aa):
MMQGNKKCTDAFSDSSSIGSVLDDADREVSSLTDRAFRSLCISEDTSFHDSYLAVSPDITRQVFGTFHQR
T
VGHTQRKSGIWSQLPSQGTEHSGWAATFQQLPKYVQGEEKYPKTSPPPTPVQRRLEVPVSGLRSSNKPV
S
KVSTLIKSFDRTESQRCESRPTASKPPALKNPPKFAPLPENSVNFCFDSAFLTVRRVPAEVSNTHQNSY
Q
PGRKHGEQESSKNPEMACHGSSSFLPAANDTATLCESKFPSPHHKPVTGEPGRGKGTFLHSENSAFESW
N
AHQPKLLERKDTAGTVPESKAPKHYGDTTLLREPCPPERTVSPCQVQASCSQEENRLAAGALSTSIPWG
C
RDPGAQVFAVEGKAPSSQPDSQEKPAQPPWRKPKTGKKGKESLQDTLEEKTQTNQRGPPLYTKHNPQEQ
F
SENNALDLPVEPNEHYDPPFNISKLLTPIIPSKHALDSADSQPAERTPSPPGQLNGYQEKEPSECQSRD
S
YKSKAPSLLFNLKDVRKRVKSTYSSSPLLKVLDEKTRGKVDGKQEPVSNGVILPNGLEESPPNELSKER
P
ADDPTASHINPQKDPTADPSEPSADSYLTLSTAPTIAKAPFYVNGEAAERSSYENKEVEGELEMGPAGS
S
WCPDSREHRPRKHLSLRLCNRDPEPGGATEKMKTHQLENGLSRSVSQETEPEREAGLQNTHLNQKFFPG
P
LSPEEEDVFYSDSQSDFMPSLKGKAKFSTSSSDQSFASFDDQQKMWFTENQREDRRKDVSAGDSQKDEK
E
NVMRKDELQYCALSNGHACLENRSQGEALQRERESVSGGRTRKASAEEANFRGSWIGENKGTTFSQAKD
L
TPSPSSASNRHMLFTIKDNTLRATPVIKPIMLPLLRTMSLEDSLSSGHKEEELPRPEWGEDPGFCAPEN
Q
DILGTSTPTNTRGTRVKCMANEVMEDPGQGSSMARMEASQPAPKGNFPSMPLVGEGDRVKAPPDAAPGL
V
ASNCKSGSADSGKLAAPWHIPTIALPEGDIEDQPPPWQPENCWEEQTPGFKSHFLSTPRAGPPGRRLVP
S
ERANSPNPGSPGESSACSPAASNIWEESSQAPGGPELLPEEPNQASPWASSSPARVTRREDLTHALVWE
G
GSDPLLELSAEDLRTLSPRGSLLDVATSPAGTSGRLELPAQLERTASKPPAVPPKTEKALRRAKKLASK
R
RKTDQAQEKHGESQEGKPCPEDLEQTQQRPLCPRERPRHNFPVVRSLPPPVHRHSVSGFSEPVGRRPGG
P
QSLTPLPAYPATQKVLQDPQSGEYFVFDLPLQVKIKTFYDPETGKYVKVSIPSSEGASPEPPPPDALAA
P
YVLYPGFQPVPVTALMPLRCSSQLSAPTFLRQGPRASAARARTQSVHESGLQLDPGPHGDCTPHSAGQR
P
HGPPQSPGEEGVEAPGLGIISTDDLEDFATEGIS




Links Key
 Links to:   History report
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 Re-query CCDS DB by:   CCDS ID
  Gene ID
  Nucleotide ID
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 Genome Browser Links:   Ensembl Genome Browser
  NCBI Sequence Viewer
  UCSC Genome Browser
  VEGA Genome Browser