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Report for CCDS44355.1 (current version)

CCDS Status Species Chrom. Gene CCDS Release NCBI Annotation Release Ensembl Annotation Release Links
44355.1 Public Homo sapiens 10 CELF2 24 110 108 CCDS HistoryNCBI Gene:10659Re-query CCDS DB by CCDS ID:44355.1Re-query CCDS DB by GeneID:10659See the combined annotation on chromosome 10 in Sequence Viewer

Public since: CCDS release 6, NCBI annotation release 37.1, Ensembl annotation release 55

Review status: Reviewed (by RefSeq and Havana)

Sequence IDs included in CCDS 44355.1

Original Current Source Nucleotide ID Protein ID MANE Status in CCDS Seq. Status Links
Original member Current member EBI ENST00000542579.5 ENSP00000443926.1 Accepted alive Link to Ensembl Transcript Viewer:ENST00000542579.5Link to Ensembl Protein Viewer:ENSP00000443926.1Re-query CCDS DB by Nucleotide ID:ENST00000542579Re-query CCDS DB by Protein ID:ENSP00000443926
Original member Current member EBI ENST00000633077.2 ENSP00000488690.1 MANE Select Accepted alive Link to Ensembl Transcript Viewer:ENST00000633077.2Link to Ensembl Protein Viewer:ENSP00000488690.1Re-query CCDS DB by Nucleotide ID:ENST00000633077Re-query CCDS DB by Protein ID:ENSP00000488690
Original member Current member NCBI NM_001326342.2 NP_001313271.1 MANE Select Accepted alive Link to Nucleotide Sequence:NM_001326342.2Link to Protein Sequence:NP_001313271.1Re-query CCDS DB by Nucleotide ID:NM_001326342Re-query CCDS DB by Protein ID:NP_001313271Link to BLAST:NP_001313271.1
Original member Current member NCBI NM_006561.4 NP_006552.3 Accepted alive Link to Nucleotide Sequence:NM_006561.4Link to Protein Sequence:NP_006552.3Re-query CCDS DB by Nucleotide ID:NM_006561Re-query CCDS DB by Protein ID:NP_006552Link to BLAST:NP_006552.3

Chromosomal Locations for CCDS 44355.1

Assembly GRCh38.p14 (GCF_000001405.40)

On '+' strand of Chromosome 10 (NC_000010.11)
Genome Browser links: Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 10Link to Ensembl Genome Browser on chromosome 10See the combined annotation on chromosome 10 in Sequence Viewer

Chromosome Start Stop Links
10 11018090 11018163 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 10Link to Ensembl Genome Browser on chromosome 10
10 11165486 11165682 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 10Link to Ensembl Genome Browser on chromosome 10
10 11217425 11217507 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 10Link to Ensembl Genome Browser on chromosome 10
10 11249153 11249201 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 10Link to Ensembl Genome Browser on chromosome 10
10 11257738 11257872 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 10Link to Ensembl Genome Browser on chromosome 10
10 11266598 11266677 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 10Link to Ensembl Genome Browser on chromosome 10
10 11270666 11270824 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 10Link to Ensembl Genome Browser on chromosome 10
10 11275057 11275120 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 10Link to Ensembl Genome Browser on chromosome 10
10 11288418 11288552 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 10Link to Ensembl Genome Browser on chromosome 10
10 11314139 11314258 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 10Link to Ensembl Genome Browser on chromosome 10
10 11321189 11321386 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 10Link to Ensembl Genome Browser on chromosome 10
10 11325836 11325979 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 10Link to Ensembl Genome Browser on chromosome 10
10 11328926 11329053 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 10Link to Ensembl Genome Browser on chromosome 10

CCDS Sequence Data
Blue highlighting indicates alternating exons.
Red highlighting indicates amino acids encoded across a splice junction.
 
Mouse over the nucleotide or protein sequence below and click on the highlighted codon or residue to select the pair.

Nucleotide Sequence (1566 nt):
ATGACTTCTGCCTTCAAGCTGGATTTCCTCCCGGACATGATGGTCGAGGGCCGCCTGCTCGTTCCTGACA
GAATTAACGGCACAGCCAACAAGATGAACGGAGCTTTGGATCACTCAGACCAACCAGACCCAGATGCCAT
TAAGATGTTTGTCGGACAGATCCCCCGGTCATGGTCGGAAAAGGAGCTGAAAGAACTTTTTGAGCCTTAC
GGAGCCGTCTACCAGATCAACGTCCTCCGGGACCGGAGTCAGAACCCTCCGCAGAGTAAAGGTTGTTGTT
TCGTAACATTTTATACAAGAAAAGCTGCACTTGAGGCCCAGAATGCACTGCACAATATTAAAACTTTACC
TGGGATGCATCATCCCATTCAGATGAAACCTGCAGATAGTGAAAAGTCCAACGCTGTGGAAGACAGAAAA
TTGTTCATAGGAATGGTATCGAAGAAATGTAATGAGAACGACATCAGGGTGATGTTCTCTCCATTTGGCC
AGATAGAAGAATGCCGGATCCTCCGGGGACCTGATGGGCTGAGTCGAGGCTGTGCGTTTGTCACATTTTC
TACAAGGGCAATGGCACAGAATGCAATCAAAGCCATGCATCAGTCTCAGACCATGGAGGGCTGCTCTTCA
CCTATCGTGGTGAAGTTTGCTGACACTCAGAAGGACAAAGAGCAAAGGCGCCTCCAGCAGCAGCTCGCTC
AGCAGATGCAGCAGCTCAACACTGCCACCTGGGGGAACCTGACAGGGCTGGGCGGACTGACCCCACAGTA
TCTGGCGCTCCTGCAGCAGGCCACCTCCTCCAGCAACCTGGGTGCGTTCAGCGGCATTCAACAAATGGCA
GGCATGAATGCTTTACAGTTGCAGAACCTGGCGACGCTGGCTGCTGCTGCAGCTGCGGCCCAGACCTCAG
CCACCAGCACCAATGCAAACCCTCTCTCTACCACGAGCAGCGCCCTGGGAGCCCTCACGAGTCCCGTGGC
TGCTTCAACCCCCAACTCCACTGCTGGTGCAGCCATGAACTCCTTGACCTCTCTCGGGACTCTGCAAGGA
CTGGCTGGAGCCACTGTTGGACTGAATAATATTAATGCACTAGCAGTTGCTCAAATGCTCTCAGGTATGG
CGGCTCTGAATGGAGGACTTGGCGCCACAGGCTTGACGAATGGCACGGCTGGCACCATGGACGCCCTCAC
CCAGGCCTACTCAGGAATTCAACAGTACGCAGCCGCCGCGCTGCCCACTCTGTACAGCCAGAGCCTGCTG
CAGCAGCAGAGCGCTGCAGGCAGCCAGAAGGAAGGTCCAGAGGGGGCAAACCTCTTTATTTACCACCTTC
CACAGGAATTTGGAGACCAGGACATTCTGCAGATGTTCATGCCTTTTGGAAATGTTATCTCTGCTAAAGT
CTTCATTGACAAACAGACCAATCTGAGCAAGTGCTTTGGTTTTGTTAGCTACGACAATCCAGTCTCTGCA
CAAGCTGCTATCCAAGCTATGAATGGCTTTCAGATCGGCATGAAACGCTTGAAGGTGCAGCTGAAGCGTT
CCAAAAACGACAGCAAACCTTACTGA

Translation (521 aa):
MTSAFKLDFLPDMMVEGRLLVPDRINGTANKMNGALDHSDQPDPDAIKMFVGQIPRSWSEKELKELFEPY
GAVYQINVLRDRSQNPPQSKGCCFVTFYTRKAALEAQNALHNIKTLPGMHHPIQMKPADSEKSNAVEDRK
LFIGMVSKKCNENDIRVMFSPFGQIEECRILRGPDGLSRGCAFVTFSTRAMAQNAIKAMHQSQTMEGCSS
PIVVKFADTQKDKEQRRLQQQLAQQMQQLNTATWGNLTGLGGLTPQYLALLQQATSSSNLGAFSGIQQMA
GMNALQLQNLATLAAAAAAAQTSATSTNANPLSTTSSALGALTSPVAASTPNSTAGAAMNSLTSLGTLQG
LAGATVGLNNINALAVAQMLSGMAALNGGLGATGLTNGTAGTMDALTQAYSGIQQYAAAALPTLYSQSLL
QQQSAAGSQKEGPEGANLFIYHLPQEFGDQDILQMFMPFGNVISAKVFIDKQTNLSKCFGFVSYDNPVSA
QAAIQAMNGFQIGMKRLKVQLKRSKNDSKPY


Links Key
 Links to:   History report
  BLAST report
  Entrez Gene
  Nucleotide report
  Protein report
 Re-query CCDS DB by:   CCDS ID
  Gene ID
  Nucleotide ID
  Protein ID
 Genome Browser Links:   Ensembl Genome Browser
  NCBI Sequence Viewer
  UCSC Genome Browser
  VEGA Genome Browser

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