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Report for CCDS44345.1 (current version)

CCDS Status Species Chrom. Gene CCDS Release NCBI Annotation Release Ensembl Annotation Release Links
44345.1 Public Homo sapiens 1 ZNF669 24 110 108 CCDS HistoryNCBI Gene:79862Re-query CCDS DB by CCDS ID:44345.1Re-query CCDS DB by GeneID:79862See the combined annotation on chromosome 1 in Sequence Viewer

Public since: CCDS release 6, NCBI annotation release 37.1, Ensembl annotation release 55

Review status: Reviewed (by RefSeq and Havana)

Sequence IDs included in CCDS 44345.1

Original Current Source Nucleotide ID Protein ID MANE Status in CCDS Seq. Status Links
Original member Current member EBI ENST00000448299.7 ENSP00000404370.2 MANE Select Accepted alive Link to Ensembl Transcript Viewer:ENST00000448299.7Link to Ensembl Protein Viewer:ENSP00000404370.2Re-query CCDS DB by Nucleotide ID:ENST00000448299Re-query CCDS DB by Protein ID:ENSP00000404370
Original member Current member NCBI NM_001142572.2 NP_001136044.1 MANE Select Accepted alive Link to Nucleotide Sequence:NM_001142572.2Link to Protein Sequence:NP_001136044.1Re-query CCDS DB by Nucleotide ID:NM_001142572Re-query CCDS DB by Protein ID:NP_001136044Link to BLAST:NP_001136044.1

RefSeq Length Related UniProtKB/SwissProt Length Identity Gaps Mismatches
NP_001136044.1 378 Q96BR6-2 378 100% 0 0

Chromosomal Locations for CCDS 44345.1

Assembly GRCh38.p14 (GCF_000001405.40)

On '-' strand of Chromosome 1 (NC_000001.11)
Genome Browser links: Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 1Link to Ensembl Genome Browser on chromosome 1See the combined annotation on chromosome 1 in Sequence Viewer

Chromosome Start Stop Links
1 247100374 247101319 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 1Link to Ensembl Genome Browser on chromosome 1
1 247101731 247101791 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 1Link to Ensembl Genome Browser on chromosome 1
1 247101987 247102113 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 1Link to Ensembl Genome Browser on chromosome 1
1 247104197 247104199 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 1Link to Ensembl Genome Browser on chromosome 1

CCDS Sequence Data
Blue highlighting indicates alternating exons.
Red highlighting indicates amino acids encoded across a splice junction.
 
Mouse over the nucleotide or protein sequence below and click on the highlighted codon or residue to select the pair.

Nucleotide Sequence (1137 nt):
ATGGACTCGGTGGCTTTTGAGGATGTGGCTGTGAACTTTACCCAGGAGGAATGGGCTTTGCTAGATTCTT
CTCAGAAGAATCTCTACAGAGAAGTGATGCAGGAAACCTGCAGGAACCTGGCTTCTGTAGGAAGCCAATG
GAAAGACCAGAATATTGAAGATCACTTCGAAAAACCTGGGAAAGATATAAGAAATCATATCGTACAGAGA
CTGTGTGAAAGTAAAGAAGATGGTCAGTATGGAGAAGTTGTCAGCCAAATTCCAAATCTTGATCTGAACG
AGAACATTTCTACTGGATTAAAACCATGTGAATGCAGTATTTGTGGAAAAGTCTTTGTACGTCATTCCCT
CCTTAATAGGCATATCCTAGCTCACTCAGGATACAAACCATATGGAGAGAAGCAATATAAATGTGAACAG
TGTGGGAAATTCTTCGTTTCTGTTCCAGGTGTTAGAAGACACATGATAATGCACAGTGGAAATCCAGCTT
ATAAATGTACGATATGTGGGAAAGCTTTTTATTTTCTCAATTCAGTTGAAAGACATCAGAGAACTCACAC
AGGAGAAAAACCCTATAAATGTAAACAATGTGGTAAAGCATTCACTGTTTCCGGTTCTTGTCTAATACAT
GAACGAACTCACACTGGAGAGAAACCCTACGAATGTAAGGAATGTGGGAAAACATTCAGATTTTCTTGTT
CTTTTAAGACGCATGAAAGGACTCACACTGGAGAAAGACCCTATAAATGTACCAAATGTGATAAAGCCTT
CAGCTGTTCCACTTCCCTTCGTTACCATGGAAGCATTCATACTGGAGAGAGACCCTATGAGTGTAAACAA
TGTGGCAAAGCCTTTAGTCGTTTGAGTTCCCTTTGTAACCATAGAAGTACTCATACCGGAGAGAAACCCT
ATGAATGTAAACAATGTGATCAAGCCTTCAGTCGCCTCAGTTCCCTTCACCTCCACGAAAGAATTCATAC
TGGAGAAAAACCCTATGAATGTAAGAAATGCGGTAAAGCCTACACTCGTTCCAGTCACCTTACTCGCCAT
GAAAGAAGTCATGATATAGAGGCTGGGTGTAGTGACTCAGCCTATAATCCCAGCACTTTGGGAGGCCAAG
GCGTGTGGATTGCTTGA

Translation (378 aa):
MDSVAFEDVAVNFTQEEWALLDSSQKNLYREVMQETCRNLASVGSQWKDQNIEDHFEKPGKDIRNHIVQR
LCESKEDGQYGEVVSQIPNLDLNENISTGLKPCECSICGKVFVRHSLLNRHILAHSGYKPYGEKQYKCEQ
CGKFFVSVPGVRRHMIMHSGNPAYKCTICGKAFYFLNSVERHQRTHTGEKPYKCKQCGKAFTVSGSCLIH
ERTHTGEKPYECKECGKTFRFSCSFKTHERTHTGERPYKCTKCDKAFSCSTSLRYHGSIHTGERPYECKQ
CGKAFSRLSSLCNHRSTHTGEKPYECKQCDQAFSRLSSLHLHERIHTGEKPYECKKCGKAYTRSSHLTRH
ERSHDIEAGCSDSAYNPSTLGGQGVWIA


Links Key
 Links to:   History report
  BLAST report
  Entrez Gene
  Nucleotide report
  Protein report
 Re-query CCDS DB by:   CCDS ID
  Gene ID
  Nucleotide ID
  Protein ID
 Genome Browser Links:   Ensembl Genome Browser
  NCBI Sequence Viewer
  UCSC Genome Browser
  VEGA Genome Browser

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