CCDS Home FTP Process Releases & Statistics
Collaborators EBI HGNC MGI NCBI
Contact Us email CCDS
Genome Displays Related Resources Gene HomoloGene MANE RefSeq
|
|
Report for CCDS44281.1 (current version)
CCDS |
Status |
Species |
Chrom. |
Gene |
CCDS Release |
NCBI Annotation Release |
Ensembl Annotation Release |
Links |
44281.1 |
Public |
Homo sapiens |
1 |
SEC16B |
24 |
110 |
108 |
|
Public since: CCDS release 6, NCBI annotation release 37.1, Ensembl annotation release 55
Review status: Reviewed (by RefSeq and Havana) Sequence IDs included in CCDS 44281.1
Original |
Current |
Source |
Nucleotide ID |
Protein ID |
MANE |
Status in CCDS |
Seq. Status |
Links |
---|
|
|
EBI |
ENST00000308284.11 |
ENSP00000308339.6 |
MANE Select |
Accepted |
alive |
|
|
|
NCBI |
NM_001390833.1 |
NP_001377762.1 |
|
Accepted |
alive |
|
|
|
NCBI |
NM_033127.4 |
NP_149118.2 |
MANE Select |
Accepted |
alive |
|
Chromosomal Locations for CCDS 44281.1
Assembly GRCh38.p14 (GCF_000001405.40)
CCDS Sequence Data |
---|
Blue highlighting indicates alternating exons. | Red highlighting indicates amino acids encoded across a splice junction. | | Mouse over the nucleotide or protein sequence below and click on the highlighted codon or residue to select the pair. |
Nucleotide Sequence (3183 nt): ATGGAACTTTGGGCTCCCCAGAGGCTGCCCCAGACACGAGGGAAGGCCACAGCACCCTCAAAGGATCCAG ACCGAGGGTTTCGGAGAGATGGACATCATCGGCCTGTCCCTCACTCTTGGCACAATGGAGAGAGGTTTCA CCAATGGCAAGACAACCGTGGGAGCCCCCAGCCACAGCAGGAGCCCAGGGCAGACCATCAGCAGCAGCCC CATTATGCATCCAGGCCAGGGGACTGGCATCAGCCTGTGTCTGGAGTTGACTATTACGAAGGTGGTTATC GCAATCAGTTGTATTCAAGGCCAGGTTATGAGAATTCATATCAGAGCTATCAGTCTCCCACAATGAGGGA GGAATATGCTTATGGAAGTTATTACTATCATGGACACCCACAGTGGCTGCAGGAAGAAAGAGTGCCAAGG CAACGGAGTCCTTATATCTGGCACGAAGATTACCGAGAGCAAAAGTACCTTGATGAACATCATTATGAAA ACCAGCACAGTCCATTTGGAACAAATAGTGAGACCCACTTCCAATCTAACAGTAGGAACCCTTGTAAAGA CAGCCCTGCTTCCAACTCTGGACAGGAGTGGCCGGGGGAGCTGTTTCCAGGGAGCCTGCTTGCTGAGGCC CAGAAAAATAAGCCATCATTGGCTAGTGAGTCCAACCTTCTCCAGCAGCGTGAGTCTGGTCTCAGCTCCA GCAGCTATGAGCTCAGTCAGTACATCAGAGATGCCCCGGAGCGGGATGATCCCCCAGCTTCAGCAGCTTG GAGTCCAGTTCAGGCTGATGTCTCCTCAGCTGGTCCCAAAGCACCCATGAAGTTCTACATCCCTCATGTT CCTGTGAGTTTCGGGCCAGGAGGTCAGCTGGTGCATGTAGGTCCCAGCTCTCCCACTGACGGGCAAGCAG CCCTTGTTGAACTGCACAGCATGGAGGTTATTCTTAATGATTCCGAAGAGCAAGAGGAGATGAGAAGTTT CTCAGGACCCTTGATTAGGGAAGATGTACATAAGGTGGATATTATGACGTTTTGCCAGCAGAAAGCAGCT CAGAGCTGCAAATCTGAGACACTGGGGAGCAGAGACTCAGCTCTACTGTGGCAGCTCTTGGTTCTCCTTT GTCGCCAGAATGGGTCCATGGTGGGGTCTGACATCGCTGAGCTGCTAATGCAAGACTGCAAGAAGCTGGA GAAGTACAAGCGGCAGCCCCCTGTGGCCAACCTCATCAACCTGACCGATGAGGACTGGCCAGTGCTGAGC TCTGGGACCCCGAACCTGCTCACGGGAGAGATCCCCCCCAGTGTGGAGACACCTGCGCAGATCGTGGAGA AATTCACTAGGCTGCTCTACTATGGAAGGAAGAAGGAAGCCTTGGAGTGGGCCATGAAGAACCACTTGTG GGGCCATGCTTTGTTCCTGTCCAGCAAGATGGACCCACAGACCTACAGCTGGGTCATGAGTGGCTTCACC AGCACGCTGGCGCTCAATGACCCACTGCAGACCCTCTTCCAGCTCATGTCGGGGAGGATTCCACAGGCAG CCACGTGTTGTGGAGAAAAGCAGTGGGGAGACTGGAGGCCTCACTTGGCTGTGATTCTGTCGAATCAGGC TGGGGACCCAGAGCTGTATCAGCGTGCGATTGTTGCCATTGGGGACACCCTGGCTGGGAAGGGGCTTGTG GAGGCAGCTCACTTCTGCTATCTCATGGCTCACGTGCCCTTTGGCCACTACACCGTGAAGACAGACCATC TGGTCTTGCTGGGCAGCAGCCACAGTCAAGAGTTTTTGAAATTTGCAACAACTGAGGCAATCCAGAGGAC GGAAATCTTCGAGTACTGTCAGATGCTGGGCCGCCCCAAATCCTTCATCCCTTCTTTCCAGGTGTATAAG CTCCTTTATGCTTCCCGTCTGGCAGATTATGGCCTCGTGTCCCAGGCTTTGCATTACTGCGAAGCCATTG GTGCAGCTGTCTTGAGCCAGGGAGAGAGCAGTCACCCTGTGCTATTAGTGGAACTCATCAAGCTAGCAGA GAAACTGAAGCTGTCAGATCCTCTGGTTTTAGAAAGACGCAGTGGAGACAGGGACCTGGAGCCAGATTGG CTAGCGCAACTTCGGAGGCAGCTGGAGCAAAAGGTAGCAGGAGACATTGGGGATCCTCATCCTACTCGCT CAGATATTTCGGGAGCCGGAGGAACAACAACAGAAAACACTTTCTACCAGGACTTTTCTGGATGTCAAGG CTACTCTGAAGCCCCTGGGTACCGCTCAGCTCTGTGGCTGACACCTGAGCAGACCTGCCTGCTCCAGCCC AGCCCACAGCAGCCCTTTCCCCTCCAGCCGGGCTCCTACCCAGCAGGAGGGGGTGCAGGGCAGACAGGGA CACCGAGGCCTTTTTACTCAGTTCCTGAGACCCATCTACCAGGGACTGGCAGCAGCGTGGCAGTGACAGA GGCCACTGGAGGAACAGTCTGGGAGGAAATGCTGCAGACACACCTGGGCCCTGGAGAGAACACAGTGTCT CAAGAAACTTCCCAGCCTCCTGATGGCCAAGAGGTCATTTCCAAACCACAGACACCATTGGCTGCTAGAC CACGAAGTATTTCTGAGAGTTCCGCCAGTTCAGCCAAGGAGGATGAGAAGGAGTCCTCTGATGAGGCTGA TAAAAACTCTCCCCGAAATACTGCCCAGAGAGGCAAGCTCGGAGATGGGAAGGAGCATACAAAGAGCTCA GGGTTTGGCTGGTTCAGCTGGTTTCGATCGAAGCCCACCAAGAACGCATCCCCCGCTGGAGACGAGGACT CCTCAGACAGCCCTGACTCTGAGGAGACCCCCAGAGCATCTTCTCCCCACCAGGCTGGCCTGGGCCTCTC ACTGACACCTTCCCCTGAGTCCCCACCTCTGCCGGATGTTAGTGCCTTCTCCAGGGGCAGAGGTGGGGGT GAAGGCCGAGGATCCGCATCCAGCGGGGGAGCAGCTGCGGGCGCTGGGGTTGGAGGCTTGTCTGGACCAG AGAGTGTTTCCTTTGAGCTCTGCTCCAACCCTGGTGTTCTTCTTCCTCCACCTGCCTTAAAAGGGGCTGT TCCTCTTTACAACCCATCTCAGGTGCCTCAGCTGCCCACGGCCACTAGCCTGAATCGGCCAAATCGCCTA GCTCAGCGTCGCTATCCCACCCAGCCATGCTGA
Translation (1060 aa): MELWAPQRLPQTRGKATAPSKDPDRGFRRDGHHRPVPHSWHNGERFHQWQDNRGSPQPQQEPRADHQQQP HYASRPGDWHQPVSGVDYYEGGYRNQLYSRPGYENSYQSYQSPTMREEYAYGSYYYHGHPQWLQEERVPR QRSPYIWHEDYREQKYLDEHHYENQHSPFGTNSETHFQSNSRNPCKDSPASNSGQEWPGELFPGSLLAEA QKNKPSLASESNLLQQRESGLSSSSYELSQYIRDAPERDDPPASAAWSPVQADVSSAGPKAPMKFYIPHV PVSFGPGGQLVHVGPSSPTDGQAALVELHSMEVILNDSEEQEEMRSFSGPLIREDVHKVDIMTFCQQKAA QSCKSETLGSRDSALLWQLLVLLCRQNGSMVGSDIAELLMQDCKKLEKYKRQPPVANLINLTDEDWPVLS SGTPNLLTGEIPPSVETPAQIVEKFTRLLYYGRKKEALEWAMKNHLWGHALFLSSKMDPQTYSWVMSGFT STLALNDPLQTLFQLMSGRIPQAATCCGEKQWGDWRPHLAVILSNQAGDPELYQRAIVAIGDTLAGKGLV EAAHFCYLMAHVPFGHYTVKTDHLVLLGSSHSQEFLKFATTEAIQRTEIFEYCQMLGRPKSFIPSFQVYK LLYASRLADYGLVSQALHYCEAIGAAVLSQGESSHPVLLVELIKLAEKLKLSDPLVLERRSGDRDLEPDW LAQLRRQLEQKVAGDIGDPHPTRSDISGAGGTTTENTFYQDFSGCQGYSEAPGYRSALWLTPEQTCLLQP SPQQPFPLQPGSYPAGGGAGQTGTPRPFYSVPETHLPGTGSSVAVTEATGGTVWEEMLQTHLGPGENTVS QETSQPPDGQEVISKPQTPLAARPRSISESSASSAKEDEKESSDEADKNSPRNTAQRGKLGDGKEHTKSS GFGWFSWFRSKPTKNASPAGDEDSSDSPDSEETPRASSPHQAGLGLSLTPSPESPPLPDVSAFSRGRGGG EGRGSASSGGAAAGAGVGGLSGPESVSFELCSNPGVLLPPPALKGAVPLYNPSQVPQLPTATSLNRPNRL AQRRYPTQPC
|