NCBI CCDS banner
PubMed Entrez Gene BLAST OMIM
  

CCDS
Home
FTP
Process
Releases & Statistics

Collaborators
EBI
HGNC
MGI
NCBI

Contact Us
email CCDS

Genome Displays

Ensembl
NCBI
UCSC
VEGA

Related Resources
Gene
HomoloGene
MANE
RefSeq


Report for CCDS44186.1 (current version)

CCDS Status Species Chrom. Gene CCDS Release NCBI Annotation Release Ensembl Annotation Release Links
44186.1 Public Homo sapiens 1 WDR47 24 110 108 CCDS HistoryNCBI Gene:22911Re-query CCDS DB by CCDS ID:44186.1Re-query CCDS DB by GeneID:22911See the combined annotation on chromosome 1 in Sequence Viewer

Public since: CCDS release 6, NCBI annotation release 37.1, Ensembl annotation release 55

Review status: Reviewed (by RefSeq and Havana)

Sequence IDs included in CCDS 44186.1

Original Current Source Nucleotide ID Protein ID MANE Status in CCDS Seq. Status Links
Original member Current member EBI ENST00000400794.7 ENSP00000383599.3 Accepted alive Link to Ensembl Transcript Viewer:ENST00000400794.7Link to Ensembl Protein Viewer:ENSP00000383599.3Re-query CCDS DB by Nucleotide ID:ENST00000400794Re-query CCDS DB by Protein ID:ENSP00000383599
Original member Current member NCBI NM_001142550.2 NP_001136022.1 Accepted alive Link to Nucleotide Sequence:NM_001142550.2Link to Protein Sequence:NP_001136022.1Re-query CCDS DB by Nucleotide ID:NM_001142550Re-query CCDS DB by Protein ID:NP_001136022Link to BLAST:NP_001136022.1

RefSeq Length Related UniProtKB/SwissProt Length Identity Gaps Mismatches
NP_001136022.1 927 O94967-4 927 100% 0 0

Chromosomal Locations for CCDS 44186.1

Assembly GRCh38.p14 (GCF_000001405.40)

On '-' strand of Chromosome 1 (NC_000001.11)
Genome Browser links: Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 1Link to Ensembl Genome Browser on chromosome 1See the combined annotation on chromosome 1 in Sequence Viewer

Chromosome Start Stop Links
1 108971430 108971572 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 1Link to Ensembl Genome Browser on chromosome 1
1 108974536 108974754 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 1Link to Ensembl Genome Browser on chromosome 1
1 108981733 108981864 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 1Link to Ensembl Genome Browser on chromosome 1
1 108982609 108982779 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 1Link to Ensembl Genome Browser on chromosome 1
1 108983282 108983451 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 1Link to Ensembl Genome Browser on chromosome 1
1 108986523 108986680 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 1Link to Ensembl Genome Browser on chromosome 1
1 108991254 108991329 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 1Link to Ensembl Genome Browser on chromosome 1
1 108995580 108995837 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 1Link to Ensembl Genome Browser on chromosome 1
1 109002224 109002402 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 1Link to Ensembl Genome Browser on chromosome 1
1 109004592 109004718 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 1Link to Ensembl Genome Browser on chromosome 1
1 109010916 109011718 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 1Link to Ensembl Genome Browser on chromosome 1
1 109013820 109013925 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 1Link to Ensembl Genome Browser on chromosome 1
1 109017518 109017601 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 1Link to Ensembl Genome Browser on chromosome 1
1 109023355 109023512 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 1Link to Ensembl Genome Browser on chromosome 1

CCDS Sequence Data
Blue highlighting indicates alternating exons.
Red highlighting indicates amino acids encoded across a splice junction.
 
Mouse over the nucleotide or protein sequence below and click on the highlighted codon or residue to select the pair.

Nucleotide Sequence (2784 nt):
ATGACGGCTGAAGAAACAGTGAATGTAAAAGAGGTTGAAATCATTAAGCTAATTTTGGACTTCCTGAATT
CAAAGAAGCTTCACATTAGTATGCTGGCCCTGGAGAAGGAAAGTGGAGTCATAAATGGCCTGTTTTCAGA
TGATATGCTTTTCCTGAGGCAGCTAATACTTGATGGTCAATGGGATGAAGTTCTTCAGTTCATTCAGCCT
CTAGAATGTATGGAAAAATTTGACAAAAAAAGGTTTCGTTATATTATCCTGAAGCAGAAGTTTTTAGAAG
CTTTATGTGTTAACAACGCGATGTCAGCAGAAGATGAGCCCCAGCATGTAAGATTTTTATTCCTGAAGCT
GGAATTTACCATGCAAGAAGCTGTGCAATGTTTACATGCTCTAGAAGAATACTGTCCTTCTAAAGATGAC
TATAGTAAGCTCTGTTTGCTTTTGACTTTGCCTCGTCTGACCAATCATGCCGAGTTTAAGGACTGGAATC
CCAGCACCGCACGAGTTCACTGTTTTGAAGAGGCTTGTGTCATGGTTGCAGAATTCATCCCTGCTGATAG
GAAGCTAAGTGAAGCTGGTTTTAAGGCTAGTAACAATCGTTTATTTCAGCTTGTAATGAAAGGCCTGCTT
TATGAATGCTGTGTAGAATTTTGTCAGAGTAAAGCAACTGGAGAAGAAATTACAGAAAGCGAAGTGCTTC
TTGGCATCGACCTCTTATGTGGTAATGGTTGTGATGATTTGGATCTGAGTTTACTGTCATGGCTTCAGAA
TCTTCCATCTTCTGTCTTCTCTTGTGCTTTTGAACAGAAAATGCTTAATATTCATGTTGACAAACTTCTG
AAACCTACAAAAGCTGCATATGCTGATCTTTTGACTCCTCTTATCAGCAAACTCTCTCCCTATCCATCAT
CCCCAATGAGAAGACCTCAATCAGCTGATGCCTATATGACCCGCTCTCTGAATCCTGCTTTAGATGGCCT
CACCTGTGGACTAACCAGTCATGATAAGAGAATTTCAGACCTTGGAAACAAAACTTCTCCAATGTCACAC
TCCTTTGCTAACTTCCATTATCCAGGGGTACAAAACCTCAGTAGAAGTCTCATGCTTGAGAATACAGAAT
GTCACAGTATTTACGAAGAATCCCCTGAGCGAAGTGATACACCTGTTGATGCACAGAGGCCTATCGGCAG
TGAAATCTTGGGCCAGAGTTCAGTTTCAGAAAAAGAGCCTGCAAATGGAGCACAGAATCCAGGACCAGCT
AAACAAGAAAAAAATGAGCTTCGAGATTCAACAGAACAATTTCAAGAATATTATAGGCAAAGATTACGCT
ATCAACAGCATTTAGAACAGAAGGAGCAACAGCGGCAGATATACCAACAGATGTTGCTTGAAGGAGGCGT
GAATCAGGAGGATGGTCCTGATCAGCAGCAGAATCTTACTGAACAGTTCCTTAATAGGTCCATTCAAAAG
CTTGGTGAATTAAATATTGGAATGGATGGCCTTGGTAATGAGGTATCAGCACTCAACCAGCAATGTAATG
GGAGCAAAGGCAATGGATCTAATGGTTCTTCTGTGACTAGTTTTACTACACCACCCCAAGACTCTAGTCA
GAGATTAACACATGATGCTTCAAATATTCATACAAGCACTCCTCGTAATCCTGGATCAACAAATCACATA
CCTTTTCTGGAGGAATCACCTTGTGGAAGCCAAATCTCTTCAGAACATTCGGTCATTAAGCCACCTCTTG
GAGATTCTCCAGGGAGTCTTTCAAGGTCGAAAGGGGAAGAGGATGACAAATCAAAAAAGCAGTTTGTTTG
TATTAATATCCTAGAAGACACACAAGCTGTTAGAGCAGTGGCTTTTCATCCAGCTGGAGGTTTATATGCT
GTTGGTTCAAATTCAAAAACTCTGAGAGTATGTGCCTATCCAGATGTAATTGATCCAAGTGCACATGAGA
CTCCTAAGCAGCCGGTGGTACGTTTTAAAAGGAATAAACATCATAAAGGATCCATTTACTGTGTGGCCTG
GAGTCCTTGTGGGCAGTTATTAGCAACAGGATCAAATGACAAATACGTCAAAGTGCTGCCCTTCAATGCA
GAGACTTGTAACGCAACAGGACCAGATCTGGAATTTAGTATGCATGATGGAACAATTAGAGACTTGGCAT
TTATGGAAGGCCCAGAAAGCGGAGGAGCTATTTTAATAAGTGCTGGAGCAGGGGATTGTAACATTTATAC
AACCGATTGTCAAAGAGGACAGGGCCTCCATGCTTTGAGTGGACATACTGGGCATATTTTAGCACTTTAT
ACCTGGAGTGGCTGGATGATTGCATCTGGTTCCCAAGATAAGACTGTTAGATTTTGGGATCTTCGAGTAC
CAAGTTGTGTTCGTGTTGTTGGCACAACATTTCATGGAACTGGCAGTGCAGTGGCATCTGTAGCTGTAGA
TCCCAGTGGTCGTCTCTTAGCCACAGGTCAAGAAGATTCTAGCTGCATGTTGTATGACATAAGAGGAGGA
AGAATGGTACAAAGTTATCATCCTCATTCCAGTGATGTTCGCTCTGTTCGATTCTCCCCTGGAGCTCACT
ACTTGCTAACAGGCTCTTATGATATGAAAATAAAGGTGACAGACCTACAAGGGGACCTCACCAAGCAGCT
TCCTATCATGGTGGTGGGGGAGCACAAGGACAAAGTGATTCAGTGCAGATGGCACACCCAGGATCTTTCC
TTCCTGTCATCCTCTGCAGATAGAACTGTCACCCTCTGGACTTACAATGGGTAG

Translation (927 aa):
MTAEETVNVKEVEIIKLILDFLNSKKLHISMLALEKESGVINGLFSDDMLFLRQLILDGQWDEVLQFIQP
LECMEKFDKKRFRYIILKQKFLEALCVNNAMSAEDEPQHVRFLFLKLEFTMQEAVQCLHALEEYCPSKDD
YSKLCLLLTLPRLTNHAEFKDWNPSTARVHCFEEACVMVAEFIPADRKLSEAGFKASNNRLFQLVMKGLL
YECCVEFCQSKATGEEITESEVLLGIDLLCGNGCDDLDLSLLSWLQNLPSSVFSCAFEQKMLNIHVDKLL
KPTKAAYADLLTPLISKLSPYPSSPMRRPQSADAYMTRSLNPALDGLTCGLTSHDKRISDLGNKTSPMSH
SFANFHYPGVQNLSRSLMLENTECHSIYEESPERSDTPVDAQRPIGSEILGQSSVSEKEPANGAQNPGPA
KQEKNELRDSTEQFQEYYRQRLRYQQHLEQKEQQRQIYQQMLLEGGVNQEDGPDQQQNLTEQFLNRSIQK
LGELNIGMDGLGNEVSALNQQCNGSKGNGSNGSSVTSFTTPPQDSSQRLTHDASNIHTSTPRNPGSTNHI
PFLEESPCGSQISSEHSVIKPPLGDSPGSLSRSKGEEDDKSKKQFVCINILEDTQAVRAVAFHPAGGLYA
VGSNSKTLRVCAYPDVIDPSAHETPKQPVVRFKRNKHHKGSIYCVAWSPCGQLLATGSNDKYVKVLPFNA
ETCNATGPDLEFSMHDGTIRDLAFMEGPESGGAILISAGAGDCNIYTTDCQRGQGLHALSGHTGHILALY
TWSGWMIASGSQDKTVRFWDLRVPSCVRVVGTTFHGTGSAVASVAVDPSGRLLATGQEDSSCMLYDIRGG
RMVQSYHPHSSDVRSVRFSPGAHYLLTGSYDMKIKVTDLQGDLTKQLPIMVVGEHKDKVIQCRWHTQDLS
FLSSSADRTVTLWTYNG


Links Key
 Links to:   History report
  BLAST report
  Entrez Gene
  Nucleotide report
  Protein report
 Re-query CCDS DB by:   CCDS ID
  Gene ID
  Nucleotide ID
  Protein ID
 Genome Browser Links:   Ensembl Genome Browser
  NCBI Sequence Viewer
  UCSC Genome Browser
  VEGA Genome Browser

Disclaimer | Write to the Help Desk
NCBI | NLM | NIH