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Report for CCDS44117.2 (current version)

CCDS Status Species Chrom. Gene CCDS Release NCBI Annotation Release Ensembl Annotation Release Links
44117.2 Public Homo sapiens 1 MYCL 24 110 108 CCDS HistoryNCBI Gene:4610Re-query CCDS DB by CCDS ID:44117.2Re-query CCDS DB by GeneID:4610See the combined annotation on chromosome 1 in Sequence Viewer

Public Note for CCDS 44117.1
The coding region has been updated to extend the N-terminus to one that is more supported by available transcripts and conservation data.

Public since: CCDS release 6, NCBI annotation release 37.1, Ensembl annotation release 55

Review status: Reviewed (by RefSeq, Havana and CCDS collaboration)

Sequence IDs included in CCDS 44117.2

Original Current Source Nucleotide ID Protein ID MANE Status in CCDS Seq. Status Links
Original member Current member EBI ENST00000372815.1 ENSP00000361902.1 Accepted alive Link to Ensembl Transcript Viewer:ENST00000372815.1Link to Ensembl Protein Viewer:ENSP00000361902.1Re-query CCDS DB by Nucleotide ID:ENST00000372815Re-query CCDS DB by Protein ID:ENSP00000361902
Original member Current member NCBI NM_005376.5 NP_005367.2 Accepted alive Link to Nucleotide Sequence:NM_005376.5Link to Protein Sequence:NP_005367.2Re-query CCDS DB by Nucleotide ID:NM_005376Re-query CCDS DB by Protein ID:NP_005367Link to BLAST:NP_005367.2

RefSeq Length Related UniProtKB/SwissProt Length Identity Gaps Mismatches
NP_005367.2 236 P12524-2 236 100% 0 0

Chromosomal Locations for CCDS 44117.2

Assembly GRCh38.p14 (GCF_000001405.40)

On '-' strand of Chromosome 1 (NC_000001.11)
Genome Browser links: Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 1Link to Ensembl Genome Browser on chromosome 1See the combined annotation on chromosome 1 in Sequence Viewer

Chromosome Start Stop Links
1 39900814 39901443 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 1Link to Ensembl Genome Browser on chromosome 1
1 39901808 39901888 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 1Link to Ensembl Genome Browser on chromosome 1

CCDS Sequence Data
Blue highlighting indicates alternating exons.
Red highlighting indicates amino acids encoded across a splice junction.
 
Mouse over the nucleotide or protein sequence below and click on the highlighted codon or residue to select the pair.

Nucleotide Sequence (711 nt):
ATGTGCGTGTGTGCTGGCTGCCGGGCTGCCCCGAGCCGGCGGGGAGCCGGTCCGCTCCAGGTGGCGGGCG
GCTGGAGCGAGGGAGCGGACATGGACTACGACTCGTACCAGCACTATTTCTACGACTATGACTGCGGGGA
GGATTTCTACCGCTCCACGGCGCCCAGCGAGGACATCTGGAAGAAATTCGAGCTGGTGCCATCGCCCCCC
ACGTCGCCGCCCTGGGGCTTGGGTCCCGGCGCAGGGGACCCGGCCCCCGGGATTGGTCCCCCGGAGCCGT
GGCCCGGAGGGTGCACCGGAGACGAAGCGGAATCCCGGGGCCACTCGAAAGGCTGGGGCAGGAACTACGC
CTCCATCATACGCCGTGACTGCATGTGGAGCGGCTTCTCGGCCCGGGAACGGCTGGAGAGAGCTGTGAGC
GACCGGCTCGCTCCTGGCGCGCCCCGGGGGAACCCGCCCAAGGCGTCCGCCGCCCCGGACTGCACTCCCA
GCCTCGAAGCCGGCAACCCGGCGCCCGCCGCCCCCTGTCCGCTGGGCGAACCCAAGACCCAGGCCTGCTC
CGGGTCCGAGAGCCCAAGCGACTCGGGTAAGGACCTCCCCGAGCCATCCAAGAGGGGGCCACCCCATGGG
TGGCCAAAGCTCTGCCCCTGCCTGAGGTCAGGCATTGGCTCTTCTCAAGCTCTTGGGCCATCTCCGCCTC
TCTTTGGCTGA

Translation (236 aa):
MCVCAGCRAAPSRRGAGPLQVAGGWSEGADMDYDSYQHYFYDYDCGEDFYRSTAPSEDIWKKFELVPSPP
TSPPWGLGPGAGDPAPGIGPPEPWPGGCTGDEAESRGHSKGWGRNYASIIRRDCMWSGFSARERLERAVS
DRLAPGAPRGNPPKASAAPDCTPSLEAGNPAPAAPCPLGEPKTQACSGSESPSDSGKDLPEPSKRGPPHG
WPKLCPCLRSGIGSSQALGPSPPLFG


Links Key
 Links to:   History report
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 Re-query CCDS DB by:   CCDS ID
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 Genome Browser Links:   Ensembl Genome Browser
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