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Report for CCDS44101.1 (current version)

CCDS Status Species Chrom. Gene CCDS Release NCBI Annotation Release Ensembl Annotation Release Links
44101.1 Public Homo sapiens 1 BSDC1 24 110 108 CCDS HistoryNCBI Gene:55108Re-query CCDS DB by CCDS ID:44101.1Re-query CCDS DB by GeneID:55108See the combined annotation on chromosome 1 in Sequence Viewer

Public since: CCDS release 6, NCBI annotation release 37.1, Ensembl annotation release 55

Review status: Reviewed (by RefSeq and Havana)

Sequence IDs included in CCDS 44101.1

Original Current Source Nucleotide ID Protein ID MANE Status in CCDS Seq. Status Links
Original member Current member EBI ENST00000526031.5 ENSP00000432382.1 Accepted alive Link to Ensembl Transcript Viewer:ENST00000526031.5Link to Ensembl Protein Viewer:ENSP00000432382.1Re-query CCDS DB by Nucleotide ID:ENST00000526031Re-query CCDS DB by Protein ID:ENSP00000432382
Original member Current member NCBI NM_001143890.3 NP_001137362.1 Accepted alive Link to Nucleotide Sequence:NM_001143890.3Link to Protein Sequence:NP_001137362.1Re-query CCDS DB by Nucleotide ID:NM_001143890Re-query CCDS DB by Protein ID:NP_001137362Link to BLAST:NP_001137362.1

RefSeq Length Related UniProtKB/SwissProt Length Identity Gaps Mismatches
NP_001137362.1 335 Q9NW68-9 335 100% 0 0

Chromosomal Locations for CCDS 44101.1

Assembly GRCh38.p14 (GCF_000001405.40)

On '-' strand of Chromosome 1 (NC_000001.11)
Genome Browser links: Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 1Link to Ensembl Genome Browser on chromosome 1See the combined annotation on chromosome 1 in Sequence Viewer

Chromosome Start Stop Links
1 32366622 32366654 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 1Link to Ensembl Genome Browser on chromosome 1
1 32368447 32368550 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 1Link to Ensembl Genome Browser on chromosome 1
1 32376262 32376741 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 1Link to Ensembl Genome Browser on chromosome 1
1 32377970 32378048 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 1Link to Ensembl Genome Browser on chromosome 1
1 32378215 32378283 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 1Link to Ensembl Genome Browser on chromosome 1
1 32378724 32378839 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 1Link to Ensembl Genome Browser on chromosome 1
1 32381214 32381268 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 1Link to Ensembl Genome Browser on chromosome 1
1 32394080 32394140 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 1Link to Ensembl Genome Browser on chromosome 1
1 32394404 32394414 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 1Link to Ensembl Genome Browser on chromosome 1

CCDS Sequence Data
Blue highlighting indicates alternating exons.
Red highlighting indicates amino acids encoded across a splice junction.
 
Mouse over the nucleotide or protein sequence below and click on the highlighted codon or residue to select the pair.

Nucleotide Sequence (1008 nt):
ATGGCGGAAGGGGAGGACGTGGGATGGTGGCGGAGCTGGCTGCAGCAGAGCTACCAAGCAGTCAAAGAGA
AGGCTCGCCTCTATAGCCTGCAGTCGGACCCAGCAACCTACTGTAATGAACCAGATGGGCCCCCGGAATT
GTTTGACGCCTGGCTTTCCCAGTTCTGCTTGGAGGAGAAGAAGGGGGAGATCTCAGAGCTCCTTGTAGGC
AGCCCCTCCATCCGGGCCCTCTACACCAAGATGGTTCCAGCAGCTGTTTCCCATTCAGAATTCTGGCATC
GGTATTTCTATAAAGTCCATCAGTTAGAGCAGGAGCAGGCCCGGAGGGACGCCCTGAAGCAGCGGGCGGA
ACAGAGCATCTCTGAAGAGCCCGGCTGGGAGGAGGAGGAAGAGGAGCTCATGGGCATTTCACCCATATCT
CCAAAAGAGGCAAAGGTTCCTGTGGCCAAAATTTCTACATTCCCTGAAGGAGAACCTGGCCCCCAGAGCC
CCTGTGAAGAGAATCTGGTGACTTCAGTTGAGCCCCCAGCAGAGGTGACTCCATCAGAGAGCAGTGAGAG
CATCTCCCTCGTGACACAGATCGCCAACCCGGCCACTGCACCTGAGGCACGAGTGCTACCCAAGGACCTG
TCCCAAAAGCTGCTAGAGGCATCCTTGGAGGAACAGGGCCTGGCTGTGGATGTGGGTGAGACTGGACCCT
CACCCCCTATTCACTCCAAGCCCCTAACGCCTGCTGGCCACACCGGCGGCCCAGAGCCCAGGCCTCCAGC
CAGAGTAGAGACTCTGAGGGAGGAGGCGCCCACAGACTTACGGGTGTTTGAGCTGAACTCGGATAGTGGG
AAGTCTACACCCTCCAACAATGGAAAGAAAGGCTCAAGCACGGACATCAGTGAGGACTGGGAGAAAGACT
TTGACTTGGACATGACTGAAGAGGAGGTGCAGATGGCACTTTCCAAAGTGGATGCCTCCGGGGAGCTGGA
AGATGTAGAGTGGGAGGACTGGGAGTGA

Translation (335 aa):
MAEGEDVGWWRSWLQQSYQAVKEKARLYSLQSDPATYCNEPDGPPELFDAWLSQFCLEEKKGEISELLVG
SPSIRALYTKMVPAAVSHSEFWHRYFYKVHQLEQEQARRDALKQRAEQSISEEPGWEEEEEELMGISPIS
PKEAKVPVAKISTFPEGEPGPQSPCEENLVTSVEPPAEVTPSESSESISLVTQIANPATAPEARVLPKDL
SQKLLEASLEEQGLAVDVGETGPSPPIHSKPLTPAGHTGGPEPRPPARVETLREEAPTDLRVFELNSDSG
KSTPSNNGKKGSSTDISEDWEKDFDLDMTEEEVQMALSKVDASGELEDVEWEDWE


Links Key
 Links to:   History report
  BLAST report
  Entrez Gene
  Nucleotide report
  Protein report
 Re-query CCDS DB by:   CCDS ID
  Gene ID
  Nucleotide ID
  Protein ID
 Genome Browser Links:   Ensembl Genome Browser
  NCBI Sequence Viewer
  UCSC Genome Browser
  VEGA Genome Browser

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