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Report for CCDS43805.1 (current version)

CCDS Status Species Chrom. Gene CCDS Release NCBI Annotation Release Ensembl Annotation Release Links
43805.1 Public Homo sapiens 9 EXOSC3 24 110 108 CCDS HistoryNCBI Gene:51010Re-query CCDS DB by CCDS ID:43805.1Re-query CCDS DB by GeneID:51010See the combined annotation on chromosome 9 in Sequence Viewer

Public since: CCDS release 5, NCBI annotation release 36.3, Ensembl annotation release 47

Review status: Reviewed (by RefSeq and Havana)

Sequence IDs included in CCDS 43805.1

Original Current Source Nucleotide ID Protein ID MANE Status in CCDS Seq. Status Links
Original member Current member EBI ENST00000396521.3 ENSP00000379775.3 Accepted alive Link to Ensembl Transcript Viewer:ENST00000396521.3Link to Ensembl Protein Viewer:ENSP00000379775.3Re-query CCDS DB by Nucleotide ID:ENST00000396521Re-query CCDS DB by Protein ID:ENSP00000379775
Original member Current member EBI ENST00000465229.5 ENSP00000418422.1 Accepted alive Link to Ensembl Transcript Viewer:ENST00000465229.5Link to Ensembl Protein Viewer:ENSP00000418422.1Re-query CCDS DB by Nucleotide ID:ENST00000465229Re-query CCDS DB by Protein ID:ENSP00000418422
Original member Current member EBI ENST00000679059.1 ENSP00000503947.1 Accepted alive Link to Ensembl Transcript Viewer:ENST00000679059.1Link to Ensembl Protein Viewer:ENSP00000503947.1Re-query CCDS DB by Nucleotide ID:ENST00000679059Re-query CCDS DB by Protein ID:ENSP00000503947
Original member Current member NCBI NM_001002269.2 NP_001002269.1 Accepted alive Link to Nucleotide Sequence:NM_001002269.2Link to Protein Sequence:NP_001002269.1Re-query CCDS DB by Nucleotide ID:NM_001002269Re-query CCDS DB by Protein ID:NP_001002269Link to BLAST:NP_001002269.1

RefSeq Length Related UniProtKB/SwissProt Length Identity Gaps Mismatches
NP_001002269.1 164 Q9NQT5-2 164 100% 0 0

Chromosomal Locations for CCDS 43805.1

Assembly GRCh38.p14 (GCF_000001405.40)

On '-' strand of Chromosome 9 (NC_000009.12)
Genome Browser links: Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 9Link to Ensembl Genome Browser on chromosome 9See the combined annotation on chromosome 9 in Sequence Viewer

Chromosome Start Stop Links
9 37780860 37780880 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 9Link to Ensembl Genome Browser on chromosome 9
9 37783914 37784063 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 9Link to Ensembl Genome Browser on chromosome 9
9 37784721 37785044 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 9Link to Ensembl Genome Browser on chromosome 9

CCDS Sequence Data
Blue highlighting indicates alternating exons.
Red highlighting indicates amino acids encoded across a splice junction.
 
Mouse over the nucleotide or protein sequence below and click on the highlighted codon or residue to select the pair.

Nucleotide Sequence (495 nt):
ATGGCCGAACCTGCGTCTGTCGCGGCTGAATCTCTCGCGGGCAGCAGGGCGCGCGCTGCACGCACAGTAC
TAGGTCAGGTGGTGCTCCCGGGTGAGGAGCTGCTCCTGCCGGAACAGGAGGACGCGGAAGGCCCTGGGGG
TGCAGTGGAGCGACCGTTGAGCCTGAATGCTAGAGCGTGCTCGCGGGTGCGCGTTGTATGCGGTCCGGGC
CTTCGGCGCTGTGGGGACCGCCTGCTGGTCACCAAGTGCGGCCGCCTCCGTCACAAGGAGCCCGGCAGTG
GCAGCGGCGGCGGTGTTTACTGGGTGGACTCTCAGCAGAAGCGGTATGTTCCAGTAAAAGGAGACCATGT
GATTGGCATAGTGACAGCTAAATCTGGAGATATATTCAAAGTTGATGTTGGAGGGAGTGAGCCAGCTTCT
TTGTCTTACTTGTCATTTGAAGGTGCAACTAAAAGAAACAGACCAAATGTGCAGGCTATTAGCTCCAGAT
TGTGA

Translation (164 aa):
MAEPASVAAESLAGSRARAARTVLGQVVLPGEELLLPEQEDAEGPGGAVERPLSLNARACSRVRVVCGPG
LRRCGDRLLVTKCGRLRHKEPGSGSGGGVYWVDSQQKRYVPVKGDHVIGIVTAKSGDIFKVDVGGSEPAS
LSYLSFEGATKRNRPNVQAISSRL


Links Key
 Links to:   History report
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 Re-query CCDS DB by:   CCDS ID
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 Genome Browser Links:   Ensembl Genome Browser
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