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Report for CCDS43672.1 (current version)

CCDS Status Species Chrom. Gene CCDS Release NCBI Annotation Release Ensembl Annotation Release Links
43672.1 Public Homo sapiens 7 OR2A14 24 110 108 CCDS HistoryNCBI Gene:135941Re-query CCDS DB by CCDS ID:43672.1Re-query CCDS DB by GeneID:135941See the combined annotation on chromosome 7 in Sequence Viewer

Public since: CCDS release 5, NCBI annotation release 36.3, Ensembl annotation release 47

Review status: Reviewed (by RefSeq and Havana)

Sequence IDs included in CCDS 43672.1

Original Current Source Nucleotide ID Protein ID MANE Status in CCDS Seq. Status Links
Original member Current member EBI ENST00000408899.2 ENSP00000386137.2 Accepted alive Link to Ensembl Transcript Viewer:ENST00000408899.2Link to Ensembl Protein Viewer:ENSP00000386137.2Re-query CCDS DB by Nucleotide ID:ENST00000408899Re-query CCDS DB by Protein ID:ENSP00000386137
Original member Current member EBI ENST00000641068.1 ENSP00000493353.1 MANE Select Accepted alive Link to Ensembl Transcript Viewer:ENST00000641068.1Link to Ensembl Protein Viewer:ENSP00000493353.1Re-query CCDS DB by Nucleotide ID:ENST00000641068Re-query CCDS DB by Protein ID:ENSP00000493353
Original member Current member NCBI NM_001001659.3 NP_001001659.1 MANE Select Accepted alive Link to Nucleotide Sequence:NM_001001659.3Link to Protein Sequence:NP_001001659.1Re-query CCDS DB by Nucleotide ID:NM_001001659Re-query CCDS DB by Protein ID:NP_001001659Link to BLAST:NP_001001659.1

RefSeq Length Related UniProtKB/SwissProt Length Identity Gaps Mismatches
NP_001001659.1 310 Q96R47 310 100% 0 0

Chromosomal Locations for CCDS 43672.1

Assembly GRCh38.p14 (GCF_000001405.40)

On '+' strand of Chromosome 7 (NC_000007.14)
Genome Browser links: Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 7Link to Ensembl Genome Browser on chromosome 7See the combined annotation on chromosome 7 in Sequence Viewer

Chromosome Start Stop Links
7 144129113 144130045 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 7Link to Ensembl Genome Browser on chromosome 7

CCDS Sequence Data
Blue highlighting indicates alternating exons.
Red highlighting indicates amino acids encoded across a splice junction.
 
Mouse over the nucleotide or protein sequence below and click on the highlighted codon or residue to select the pair.

Nucleotide Sequence (933 nt):
ATGGAAGGCAACAAGACATGGATCACAGACATCACCTTGCCGCGATTCCAGGTTGGTCCAGCACTGGAGA
TTCTCCTCTGTGGACTTTTCTCTGCCTTCTATACACTCACCCTGCTGGGGAATGGGGTCATCTTTGGGAT
TATCTGCCTGGACTGTAAGCTTCACACACCCATGTACTTCTTCCTCTCACACCTGGCCATTGTTGACATA
TCCTATGCTTCCAACTATGTCCCCAAGATGCTGACGAATCTTATGAACCAGGAAAGCACCATCTCCTTTT
TTCCATGCATAATGCAGACATTCTTGTATTTGGCTTTTGCTCACGTAGAGTGTCTGATTTTGGTGGTGAT
GTCCTATGATCGCTATGCGGACATCTGCCACCCCTTACGTTACAATAGCCTCATGAGCTGGAGAGTGTGC
ACTGTCCTGGCTGTGGCTTCCTGGGTGTTCAGCTTCCTCCTGGCTCTGGTCCCTTTAGTTCTCATCCTGA
GCCTGCCCTTCTGCGGGCCTCATGAAATCAACCACTTCTTCTGTGAAATCCTGTCTGTCCTCAAGTTGGC
CTGTGCTGACACCTGGCTCAACCAGGTGGTCATCTTTGCAGCCTGCGTGTTCATCCTGGTGGGGCCACTC
TGCCTGGTGCTGGTCTCCTACTTGCGCATCCTGGCCGCCATCTTGAGGATCCAGTCTGGGGAGGGCCGCA
GAAAGGCCTTCTCCACCTGCTCCTCCCACCTTTGCGTGGTGGGACTCTTCTTTGGCAGCGCCATTGTCAC
GTACATGGCCCCCAAGTCCCGCCATCCTGAGGAGCAGCAGAAAGTTCTTTCCCTGTTTTACAGCCTTTTC
AATCCAATGCTGAACCCCCTGATATATAGCCTAAGGAATGCAGAGGTCAAGGGCGCCCTGAGGAGGGCAC
TGAGGAAGGAGAGGCTGACGTGA

Translation (310 aa):
MEGNKTWITDITLPRFQVGPALEILLCGLFSAFYTLTLLGNGVIFGIICLDCKLHTPMYFFLSHLAIVDI
SYASNYVPKMLTNLMNQESTISFFPCIMQTFLYLAFAHVECLILVVMSYDRYADICHPLRYNSLMSWRVC
TVLAVASWVFSFLLALVPLVLILSLPFCGPHEINHFFCEILSVLKLACADTWLNQVVIFAACVFILVGPL
CLVLVSYLRILAAILRIQSGEGRRKAFSTCSSHLCVVGLFFGSAIVTYMAPKSRHPEEQQKVLSLFYSLF
NPMLNPLIYSLRNAEVKGALRRALRKERLT


Links Key
 Links to:   History report
  BLAST report
  Entrez Gene
  Nucleotide report
  Protein report
 Re-query CCDS DB by:   CCDS ID
  Gene ID
  Nucleotide ID
  Protein ID
 Genome Browser Links:   Ensembl Genome Browser
  NCBI Sequence Viewer
  UCSC Genome Browser
  VEGA Genome Browser

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