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Report for CCDS43667.1 (current version)

CCDS Status Species Chrom. Gene CCDS Release NCBI Annotation Release Ensembl Annotation Release Links
43667.1 Public Homo sapiens 7 OR6B1 24 110 108 CCDS HistoryNCBI Gene:135946Re-query CCDS DB by CCDS ID:43667.1Re-query CCDS DB by GeneID:135946See the combined annotation on chromosome 7 in Sequence Viewer

Public since: CCDS release 5, NCBI annotation release 36.3, Ensembl annotation release 47

Review status: Reviewed (by RefSeq and Havana)


Attributes
CDS uses downstream AUG

Sequence IDs included in CCDS 43667.1

Original Current Source Nucleotide ID Protein ID MANE Status in CCDS Seq. Status Links
Original member Current member EBI ENST00000408922.3 ENSP00000386151.2 Accepted alive Link to Ensembl Transcript Viewer:ENST00000408922.3Link to Ensembl Protein Viewer:ENSP00000386151.2Re-query CCDS DB by Nucleotide ID:ENST00000408922Re-query CCDS DB by Protein ID:ENSP00000386151
Original member Current member EBI ENST00000641698.1 ENSP00000492907.1 MANE Select Accepted alive Link to Ensembl Transcript Viewer:ENST00000641698.1Link to Ensembl Protein Viewer:ENSP00000492907.1Re-query CCDS DB by Nucleotide ID:ENST00000641698Re-query CCDS DB by Protein ID:ENSP00000492907
Original member Current member NCBI NM_001005281.3 NP_001005281.1 MANE Select Accepted alive Link to Nucleotide Sequence:NM_001005281.3Link to Protein Sequence:NP_001005281.1Re-query CCDS DB by Nucleotide ID:NM_001005281Re-query CCDS DB by Protein ID:NP_001005281Link to BLAST:NP_001005281.1

RefSeq Length Related UniProtKB/SwissProt Length Identity Gaps Mismatches
NP_001005281.1 311 O95007 311 100% 0 0

Chromosomal Locations for CCDS 43667.1

Assembly GRCh38.p14 (GCF_000001405.40)

On '+' strand of Chromosome 7 (NC_000007.14)
Genome Browser links: Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 7Link to Ensembl Genome Browser on chromosome 7See the combined annotation on chromosome 7 in Sequence Viewer

Chromosome Start Stop Links
7 144003997 144004932 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 7Link to Ensembl Genome Browser on chromosome 7

CCDS Sequence Data
Blue highlighting indicates alternating exons.
Red highlighting indicates amino acids encoded across a splice junction.
 
Mouse over the nucleotide or protein sequence below and click on the highlighted codon or residue to select the pair.

Nucleotide Sequence (936 nt):
ATGGAGTTGGAGAACCAGACACGAGTCACCAAGTTCATTCTGGTGGGATTCCCTGGGAGCTTGAGTATGC
GGGCAGCCATGTTTCTGATATTCCTTGTGGCCTATATTCTGACAGTGGCTGAAAACGTGATCATCATCCT
ATTGGTGCTGCAAAATCGGCCACTGCACAAGCCTATGTACTTCTTCCTGGCCAACCTGTCCTTCTTGGAG
ACCTGGTACATCTCTGTGACTGTGCCCAAGTTACTGTTTAGTTTTTGGTCTGTGAACAACAGCATCTCTT
TCACACTCTGTATGATACAACTGTACTTCTTCATTGCTCTCATGTGCACAGAATGTGTGCTTCTGGCCGC
CATGGCCTATGACCGGTATGTGGCCATCTGTCGCCCACTCCACTACCCAACCATAATGAGCCATGGGCTC
TGCTTCCGCCTCGCTCTTGGTTCCTGGGCCATTGGCTTTGGCATCTCCCTGGCGAAGATCTACTTCATCT
CCTGCCTCAGCTTCTGTGGTCCCAATGTCATCAACCACTTCTTCTGTGACATCTCTCCAGTACTTAATCT
CTCCTGCACAGACATGTCCATAACTGAGTTGGTAGACTTTATCCTGGCACTGGTCATCTTCCTATTCCCA
CTCTTTATTACTGTCCTGTCCTACGGATGCATTCTGGCCACCATATTATGCATGCCCACAGGAAAGCAGA
AAGCGTTCTCCACTTGTGCCTCCCATCTTGTGGTGGTCACCATTTTCTATTCAGCCATTATTTTCATGTA
TGCTCGACCTCGAGTTATCCATGCCTTCAACATGAACAAAATTATTTCCATCTTCTATGCCATTGTCACT
CCTTCTCTCAACCCTTTCATTTATTGCCTAAGAAACCGAGAGGTCAAGGAAGCTCTGAAGAAACTGGCAT
ATTGCCAGGCCAGCAGATCTGACTAG

Translation (311 aa):
MELENQTRVTKFILVGFPGSLSMRAAMFLIFLVAYILTVAENVIIILLVLQNRPLHKPMYFFLANLSFLE
TWYISVTVPKLLFSFWSVNNSISFTLCMIQLYFFIALMCTECVLLAAMAYDRYVAICRPLHYPTIMSHGL
CFRLALGSWAIGFGISLAKIYFISCLSFCGPNVINHFFCDISPVLNLSCTDMSITELVDFILALVIFLFP
LFITVLSYGCILATILCMPTGKQKAFSTCASHLVVVTIFYSAIIFMYARPRVIHAFNMNKIISIFYAIVT
PSLNPFIYCLRNREVKEALKKLAYCQASRSD


Links Key
 Links to:   History report
  BLAST report
  Entrez Gene
  Nucleotide report
  Protein report
 Re-query CCDS DB by:   CCDS ID
  Gene ID
  Nucleotide ID
  Protein ID
 Genome Browser Links:   Ensembl Genome Browser
  NCBI Sequence Viewer
  UCSC Genome Browser
  VEGA Genome Browser

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