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Report for CCDS43666.1 (current version)

CCDS Status Species Chrom. Gene CCDS Release NCBI Annotation Release Ensembl Annotation Release Links
43666.1 Public Homo sapiens 7 OR2F2 24 110 108 CCDS HistoryNCBI Gene:135948Re-query CCDS DB by CCDS ID:43666.1Re-query CCDS DB by GeneID:135948See the combined annotation on chromosome 7 in Sequence Viewer

Public since: CCDS release 5, NCBI annotation release 36.3, Ensembl annotation release 47

Review status: Reviewed (by RefSeq and Havana)

Sequence IDs included in CCDS 43666.1

Original Current Source Nucleotide ID Protein ID MANE Status in CCDS Seq. Status Links
Original member Current member EBI ENST00000408955.3 ENSP00000386222.2 MANE Select Accepted alive Link to Ensembl Transcript Viewer:ENST00000408955.3Link to Ensembl Protein Viewer:ENSP00000386222.2Re-query CCDS DB by Nucleotide ID:ENST00000408955Re-query CCDS DB by Protein ID:ENSP00000386222
Original member Current member NCBI NM_001004685.1 NP_001004685.1 MANE Select Accepted alive Link to Nucleotide Sequence:NM_001004685.1Link to Protein Sequence:NP_001004685.1Re-query CCDS DB by Nucleotide ID:NM_001004685Re-query CCDS DB by Protein ID:NP_001004685Link to BLAST:NP_001004685.1

RefSeq Length Related UniProtKB/SwissProt Length Identity Gaps Mismatches
NP_001004685.1 317 O95006 317 100% 0 0

Chromosomal Locations for CCDS 43666.1

Assembly GRCh38.p14 (GCF_000001405.40)

On '+' strand of Chromosome 7 (NC_000007.14)
Genome Browser links: Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 7Link to Ensembl Genome Browser on chromosome 7See the combined annotation on chromosome 7 in Sequence Viewer

Chromosome Start Stop Links
7 143935233 143936186 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 7Link to Ensembl Genome Browser on chromosome 7

CCDS Sequence Data
Blue highlighting indicates alternating exons.
Red highlighting indicates amino acids encoded across a splice junction.
 
Mouse over the nucleotide or protein sequence below and click on the highlighted codon or residue to select the pair.

Nucleotide Sequence (954 nt):
ATGGAAATAGATAACCAGACGTGGGTGAGAGAATTTATTCTCCTTGGCTTATCCAGTGACTGGTGCACTC
AGATATCCCTGTTTTCCCTGTTCTTGGTCACATACCTCATGACAGTGCTGGGGAACTGTCTCATTGTCCT
TCTGATCAGACTGGACAGCCGACTCCACACTCCCATGTATTTCTTTCTCACCAACCTCTCCCTTGTCGAT
GTCTCCTATGCCACAAGCGTAGTCCCCCAGCTGCTGGCACATTTTCTTGCAGAACATAAAGCCATCCCAT
TCCAGAGCTGTGCAGCCCAGTTATTTTTCTCCCTGGCCTTGGGTGGGATTGAGTTTGTTCTCCTGGCAGT
GATGGCCTATGACCGCCATGTGGCTGTGTCTGACCGCCTGCGATACTCGGCCATCATGCATGGAGGGCTG
TGTGCTAGGTTGGCCATCACATCCTGGGTCAGTGGCTCCATCAACTCTCTTGTGCAGACTGCTATCACCT
TTCAGCTGCCCATGTGCACTAACAAGTTTATTGATCACATATCCTGTGAACTCCTAGCTGTGGTCAGGCT
GGCTTGTGTGGACACCTCCTCCAATGAGGCTGCCATCATGGTGTCTAGCATTGTTCTTCTGATGACACCT
TTCTGCCTGGTTCTGTTGTCCTACATCCGGATCATCTCCACCATCCTAAAGATCCAGTCCAGAGAAGGAA
GAAAGAAAGCCTTCCACACGTGTGCCTCTCACCTCACGGTGGTTGCCCTGTGCTACGGCACAACGATTTT
CACTTACATCCAGCCCCACTCTGGTCCCTCAGTCCTTCAAGAGAAGCTGATCTCTGTCTTCTATGCCATT
GTTATGCCTCTGCTGAACCCTGTGATTTATAGTCTAAGGAATAAAGAGGTGAAGGGGGCCTGGCATAAAC
TATTAGAGAAATTCTCTGGGTTAACATCCAAGCTGGGAACTTGA

Translation (317 aa):
MEIDNQTWVREFILLGLSSDWCTQISLFSLFLVTYLMTVLGNCLIVLLIRLDSRLHTPMYFFLTNLSLVD
VSYATSVVPQLLAHFLAEHKAIPFQSCAAQLFFSLALGGIEFVLLAVMAYDRHVAVSDRLRYSAIMHGGL
CARLAITSWVSGSINSLVQTAITFQLPMCTNKFIDHISCELLAVVRLACVDTSSNEAAIMVSSIVLLMTP
FCLVLLSYIRIISTILKIQSREGRKKAFHTCASHLTVVALCYGTTIFTYIQPHSGPSVLQEKLISVFYAI
VMPLLNPVIYSLRNKEVKGAWHKLLEKFSGLTSKLGT


Links Key
 Links to:   History report
  BLAST report
  Entrez Gene
  Nucleotide report
  Protein report
 Re-query CCDS DB by:   CCDS ID
  Gene ID
  Nucleotide ID
  Protein ID
 Genome Browser Links:   Ensembl Genome Browser
  NCBI Sequence Viewer
  UCSC Genome Browser
  VEGA Genome Browser

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