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Report for CCDS43619.1 (current version)

CCDS Status Species Chrom. Gene CCDS Release NCBI Annotation Release Ensembl Annotation Release Links
43619.1 Public Homo sapiens 7 ZNF3 24 110 108 CCDS HistoryNCBI Gene:7551Re-query CCDS DB by CCDS ID:43619.1Re-query CCDS DB by GeneID:7551See the combined annotation on chromosome 7 in Sequence Viewer

Public since: CCDS release 5, NCBI annotation release 36.3, Ensembl annotation release 47

Review status: Reviewed (by RefSeq and Havana)

Sequence IDs included in CCDS 43619.1

Original Current Source Nucleotide ID Protein ID MANE Status in CCDS Seq. Status Links
Original member Current member EBI ENST00000299667.9 ENSP00000299667.4 MANE Select Accepted alive Link to Ensembl Transcript Viewer:ENST00000299667.9Link to Ensembl Protein Viewer:ENSP00000299667.4Re-query CCDS DB by Nucleotide ID:ENST00000299667Re-query CCDS DB by Protein ID:ENSP00000299667
Original member Current member EBI ENST00000303915.10 ENSP00000306372.6 Accepted alive Link to Ensembl Transcript Viewer:ENST00000303915.10Link to Ensembl Protein Viewer:ENSP00000306372.6Re-query CCDS DB by Nucleotide ID:ENST00000303915Re-query CCDS DB by Protein ID:ENSP00000306372
Original member Current member EBI ENST00000424697.5 ENSP00000415358.1 Accepted alive Link to Ensembl Transcript Viewer:ENST00000424697.5Link to Ensembl Protein Viewer:ENSP00000415358.1Re-query CCDS DB by Nucleotide ID:ENST00000424697Re-query CCDS DB by Protein ID:ENSP00000415358
Original member Current member NCBI NM_001278284.2 NP_001265213.1 Accepted alive Link to Nucleotide Sequence:NM_001278284.2Link to Protein Sequence:NP_001265213.1Re-query CCDS DB by Nucleotide ID:NM_001278284Re-query CCDS DB by Protein ID:NP_001265213Link to BLAST:NP_001265213.1
Original member Current member NCBI NM_001278287.2 NP_001265216.1 Accepted alive Link to Nucleotide Sequence:NM_001278287.2Link to Protein Sequence:NP_001265216.1Re-query CCDS DB by Nucleotide ID:NM_001278287Re-query CCDS DB by Protein ID:NP_001265216Link to BLAST:NP_001265216.1
Original member Current member NCBI NM_001278290.2 NP_001265219.1 Accepted alive Link to Nucleotide Sequence:NM_001278290.2Link to Protein Sequence:NP_001265219.1Re-query CCDS DB by Nucleotide ID:NM_001278290Re-query CCDS DB by Protein ID:NP_001265219Link to BLAST:NP_001265219.1
Original member Current member NCBI NM_001318135.2 NP_001305064.1 Accepted alive Link to Nucleotide Sequence:NM_001318135.2Link to Protein Sequence:NP_001305064.1Re-query CCDS DB by Nucleotide ID:NM_001318135Re-query CCDS DB by Protein ID:NP_001305064Link to BLAST:NP_001305064.1
Original member Current member NCBI NM_001371211.1 NP_001358140.1 Accepted alive Link to Nucleotide Sequence:NM_001371211.1Link to Protein Sequence:NP_001358140.1Re-query CCDS DB by Nucleotide ID:NM_001371211Re-query CCDS DB by Protein ID:NP_001358140Link to BLAST:NP_001358140.1
Original member Current member NCBI NM_001371212.1 NP_001358141.1 Accepted alive Link to Nucleotide Sequence:NM_001371212.1Link to Protein Sequence:NP_001358141.1Re-query CCDS DB by Nucleotide ID:NM_001371212Re-query CCDS DB by Protein ID:NP_001358141Link to BLAST:NP_001358141.1
Original member Current member NCBI NM_001371213.1 NP_001358142.1 Accepted alive Link to Nucleotide Sequence:NM_001371213.1Link to Protein Sequence:NP_001358142.1Re-query CCDS DB by Nucleotide ID:NM_001371213Re-query CCDS DB by Protein ID:NP_001358142Link to BLAST:NP_001358142.1
Original member Current member NCBI NM_001371214.1 NP_001358143.1 Accepted alive Link to Nucleotide Sequence:NM_001371214.1Link to Protein Sequence:NP_001358143.1Re-query CCDS DB by Nucleotide ID:NM_001371214Re-query CCDS DB by Protein ID:NP_001358143Link to BLAST:NP_001358143.1
Original member Current member NCBI NM_032924.5 NP_116313.3 MANE Select Accepted alive Link to Nucleotide Sequence:NM_032924.5Link to Protein Sequence:NP_116313.3Re-query CCDS DB by Nucleotide ID:NM_032924Re-query CCDS DB by Protein ID:NP_116313Link to BLAST:NP_116313.3

RefSeq Length Related UniProtKB/SwissProt Length Identity Gaps Mismatches
NP_001265213.1 446 P17036-1 446 100% 0 0
NP_001265216.1 446 P17036-1 446 100% 0 0
NP_001265219.1 446 P17036-1 446 100% 0 0
NP_001305064.1 446 P17036-1 446 100% 0 0
NP_001358140.1 446 P17036-1 446 100% 0 0
NP_001358141.1 446 P17036-1 446 100% 0 0
NP_001358142.1 446 P17036-1 446 100% 0 0
NP_001358143.1 446 P17036-1 446 100% 0 0
NP_116313.3 446 P17036-1 446 100% 0 0

Chromosomal Locations for CCDS 43619.1

Assembly GRCh38.p14 (GCF_000001405.40)

On '-' strand of Chromosome 7 (NC_000007.14)
Genome Browser links: Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 7Link to Ensembl Genome Browser on chromosome 7See the combined annotation on chromosome 7 in Sequence Viewer

Chromosome Start Stop Links
7 100071143 100072212 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 7Link to Ensembl Genome Browser on chromosome 7
7 100075135 100075261 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 7Link to Ensembl Genome Browser on chromosome 7
7 100075542 100075630 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 7Link to Ensembl Genome Browser on chromosome 7
7 100077303 100077357 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 7Link to Ensembl Genome Browser on chromosome 7

CCDS Sequence Data
Blue highlighting indicates alternating exons.
Red highlighting indicates amino acids encoded across a splice junction.
 
Mouse over the nucleotide or protein sequence below and click on the highlighted codon or residue to select the pair.

Nucleotide Sequence (1341 nt):
ATGGAAACTCAGGCTGATCTCGTATCTCAGGAACCTCAGGCCCTGCTTGACAGTGCTCTTCCTTCAAAAG
TTCCTGCCTTTTCCGACAAGGACAGCCTGGGGGATGAGATGTTGGCGGCTGCGCTCCTAAAGGCCAAGTC
CCAGGAGCTGGTAACCTTTGAGGATGTAGCTGTGTACTTCATCCGGAAGGAGTGGAAGCGTTTGGAACCT
GCTCAGAGGGACCTCTATAGAGATGTGATGCTGGAGAATTACGGGAATGTGTTCTCACTGGATCGTGAGA
CCAGGACTGAAAATGATCAAGAAATTTCTGAAGACACAAGATCACATGGGGTCCTACTGGGAAGATTTCA
AAAGGATATTTCTCAGGGTCTCAAGTTTAAAGAAGCCTATGAACGAGAAGTCAGTCTGAAAAGGCCGCTG
GGGAACTCCCCTGGAGAAAGACTGAACAGGAAAATGCCAGATTTTGGTCAAGTGACAGTTGAGGAGAAGC
TAACCCCCAGGGGAGAGAGAAGCGAGAAATATAATGATTTTGGGAACAGCTTCACTGTGAATTCCAACCT
TATCTCACATCAGAGACTCCCCGTGGGAGACAGACCCCATAAGTGTGATGAATGTAGCAAGAGCTTTAAT
CGAACTTCAGACCTTATTCAACATCAGAGAATCCACACTGGGGAAAAGCCCTATGAATGTAATGAGTGTG
GGAAGGCCTTCAGCCAGAGCTCACACCTTATTCAGCATCAGAGAATCCACACTGGGGAAAAACCTTATGA
ATGTAGTGATTGTGGGAAAACCTTCAGCTGTAGCTCTGCCCTCATTCTGCATCGGAGGATCCACACGGGG
GAGAAACCCTATGAATGTAATGAGTGTGGGAAGACCTTCAGCTGGAGCTCCACCCTCACCCACCATCAGA
GAATCCACACTGGTGAGAAACCCTACGCCTGCAATGAATGTGGGAAGGCCTTCAGCAGGAGCTCAACCCT
TATTCACCATCAGAGAATCCACACTGGAGAAAAACCCTATGAATGTAATGAATGTGGGAAAGCCTTCAGC
CAGAGCTCACACCTCTATCAGCACCAGAGAATCCACACTGGAGAGAAGCCCTACGAATGTATGGAATGTG
GAGGAAAGTTTACCTACAGTTCAGGCCTTATTCAGCATCAAAGAATCCACACCGGGGAGAACCCCTATGA
ATGTAGTGAGTGTGGGAAAGCCTTCAGGTACAGCTCGGCTCTTGTTCGCCATCAGAGAATTCACACTGGA
GAGAAGCCTTTGAATGGGATCGGCATGAGCAAAAGCTCCCTCAGAGTTACGACCGAGTTAAATATCAGAG
AGTCCACGTGA

Translation (446 aa):
METQADLVSQEPQALLDSALPSKVPAFSDKDSLGDEMLAAALLKAKSQELVTFEDVAVYFIRKEWKRLEP
AQRDLYRDVMLENYGNVFSLDRETRTENDQEISEDTRSHGVLLGRFQKDISQGLKFKEAYEREVSLKRPL
GNSPGERLNRKMPDFGQVTVEEKLTPRGERSEKYNDFGNSFTVNSNLISHQRLPVGDRPHKCDECSKSFN
RTSDLIQHQRIHTGEKPYECNECGKAFSQSSHLIQHQRIHTGEKPYECSDCGKTFSCSSALILHRRIHTG
EKPYECNECGKTFSWSSTLTHHQRIHTGEKPYACNECGKAFSRSSTLIHHQRIHTGEKPYECNECGKAFS
QSSHLYQHQRIHTGEKPYECMECGGKFTYSSGLIQHQRIHTGENPYECSECGKAFRYSSALVRHQRIHTG
EKPLNGIGMSKSSLRVTTELNIREST


Links Key
 Links to:   History report
  BLAST report
  Entrez Gene
  Nucleotide report
  Protein report
 Re-query CCDS DB by:   CCDS ID
  Gene ID
  Nucleotide ID
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 Genome Browser Links:   Ensembl Genome Browser
  NCBI Sequence Viewer
  UCSC Genome Browser
  VEGA Genome Browser

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