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Report for CCDS43612.1 (current version)

CCDS Status Species Chrom. Gene CCDS Release NCBI Annotation Release Ensembl Annotation Release Links
43612.1 Public Homo sapiens 7 STEAP2 24 110 108 CCDS HistoryNCBI Gene:261729Re-query CCDS DB by CCDS ID:43612.1Re-query CCDS DB by GeneID:261729See the combined annotation on chromosome 7 in Sequence Viewer

Public since: CCDS release 5, NCBI annotation release 36.3, Ensembl annotation release 47

Review status: Reviewed (by RefSeq and Havana)

Sequence IDs included in CCDS 43612.1

Original Current Source Nucleotide ID Protein ID MANE Status in CCDS Seq. Status Links
Original member Current member EBI ENST00000394626.5 ENSP00000378123.1 Accepted alive Link to Ensembl Transcript Viewer:ENST00000394626.5Link to Ensembl Protein Viewer:ENSP00000378123.1Re-query CCDS DB by Nucleotide ID:ENST00000394626Re-query CCDS DB by Protein ID:ENSP00000378123
Original member Current member EBI ENST00000394629.2 ENSP00000378125.2 Accepted alive Link to Ensembl Transcript Viewer:ENST00000394629.2Link to Ensembl Protein Viewer:ENSP00000378125.2Re-query CCDS DB by Nucleotide ID:ENST00000394629Re-query CCDS DB by Protein ID:ENSP00000378125
Original member Current member NCBI NM_001040666.2 NP_001035756.1 Accepted alive Link to Nucleotide Sequence:NM_001040666.2Link to Protein Sequence:NP_001035756.1Re-query CCDS DB by Nucleotide ID:NM_001040666Re-query CCDS DB by Protein ID:NP_001035756Link to BLAST:NP_001035756.1
Original member Current member NCBI NM_001244945.2 NP_001231874.1 Accepted alive Link to Nucleotide Sequence:NM_001244945.2Link to Protein Sequence:NP_001231874.1Re-query CCDS DB by Nucleotide ID:NM_001244945Re-query CCDS DB by Protein ID:NP_001231874Link to BLAST:NP_001231874.1

RefSeq Length Related UniProtKB/SwissProt Length Identity Gaps Mismatches
NP_001035756.1 454 Q8NFT2-2 454 100% 0 0
NP_001231874.1 454 Q8NFT2-2 454 100% 0 0

Chromosomal Locations for CCDS 43612.1

Assembly GRCh38.p14 (GCF_000001405.40)

On '+' strand of Chromosome 7 (NC_000007.14)
Genome Browser links: Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 7Link to Ensembl Genome Browser on chromosome 7See the combined annotation on chromosome 7 in Sequence Viewer

Chromosome Start Stop Links
7 90225083 90225574 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 7Link to Ensembl Genome Browser on chromosome 7
7 90226971 90227498 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 7Link to Ensembl Genome Browser on chromosome 7
7 90229872 90230036 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 7Link to Ensembl Genome Browser on chromosome 7
7 90232337 90232484 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 7Link to Ensembl Genome Browser on chromosome 7
7 90236891 90236922 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 7Link to Ensembl Genome Browser on chromosome 7

CCDS Sequence Data
Blue highlighting indicates alternating exons.
Red highlighting indicates amino acids encoded across a splice junction.
 
Mouse over the nucleotide or protein sequence below and click on the highlighted codon or residue to select the pair.

Nucleotide Sequence (1365 nt):
ATGGAATCAATCTCTATGATGGGAAGCCCTAAGAGCCTTAGTGAAACTTTTTTACCTAATGGCATAAATG
GT
ATCAAAGATGCAAGGAAGGTCACTGTAGGTGTGATTGGAAGTGGAGATTTTGCCAAATCCTTGACCAT
T
CGACTTATTAGATGCGGCTATCATGTGGTCATAGGAAGTAGAAATCCTAAGTTTGCTTCTGAATTTTTT
CCT
CATGTGGTAGATGTCACTCATCATGAAGATGCTCTCACAAAAACAAATATAATATTTGTTGCTATAC
AC
AGAGAACATTATACCTCCCTGTGGGACCTGAGACATCTGCTTGTGGGTAAAATCCTGATTGATGTGAG
C
AATAACATGAGGATAAACCAGTACCCAGAATCCAATGCTGAATATTTGGCTTCATTATTCCCAGATTCT
TTG
ATTGTCAAAGGATTTAATGTTGTCTCAGCTTGGGCACTTCAGTTAGGACCTAAGGATGCCAGCCGGC
AG
GTTTATATATGCAGCAACAATATTCAAGCGCGACAACAGGTTATTGAACTTGCCCGCCAGTTGAATTT
C
ATTCCCATTGACTTGGGATCCTTATCATCAGCCAGAGAGATTGAAAATTTACCCCTACGACTCTTTACT
CTC
TGGAGAGGGCCAGTGGTGGTAGCTATAAGCTTGGCCACATTTTTTTTCCTTTATTCCTTTGTCAGAG
AT
GTGATTCATCCATATGCTAGAAACCAACAGAGTGACTTTTACAAAATTCCTATAGAGATTGTGAATAA
A
ACCTTACCTATAGTTGCCATTACTTTGCTCTCCCTAGTATACCTCGCAGGTCTTCTGGCAGCTGCTTAT
CAA
CTTTATTACGGCACCAAGTATAGGAGATTTCCACCTTGGTTGGAAACCTGGTTACAGTGTAGAAAAC
AG
CTTGGATTACTAAGTTTTTTCTTCGCTATGGTCCATGTTGCCTACAGCCTCTGCTTACCGATGAGAAG
G
TCAGAGAGATATTTGTTTCTCAACATGGCTTATCAGCAGGTTCATGCAAATATTGAAAACTCTTGGAAT
GAG
GAAGAAGTTTGGAGAATTGAAATGTATATCTCCTTTGGCATAATGAGCCTTGGCTTACTTTCCCTCC
TG
GCAGTCACTTCTATCCCTTCAGTGAGCAATGCTTTAAACTGGAGAGAATTCAGTTTTATTCAGTCTAC
A
CTTGGATATGTCGCTCTGCTCATAAGTACTTTCCATGTTTTAATTTATGGATGGAAACGAGCTTTTGAG
GAA
GAGTACTACAGATTTTATACACCACCAAACTTTGTTCTTGCTCTTGTTTTGCCCTCAATTGTAATTC
TG
GATCTTTTGCAGCTTTGCAGATACCCAGACTGA


Translation (454 aa):
MESISMMGSPKSLSETFLPNGINGIKDARKVTVGVIGSGDFAKSLTIRLIRCGYHVVIGSRNPKFASEFF
P
HVVDVTHHEDALTKTNIIFVAIHREHYTSLWDLRHLLVGKILIDVSNNMRINQYPESNAEYLASLFPDS
L
IVKGFNVVSAWALQLGPKDASRQ
VYICSNNIQARQQVIELARQLNFIPIDLGSLSSAREIENLPLRLFT
L
WRGPVVVAISLATFFFLYSFVRDVIHPYARNQQSDFYKIPIEIVNKTLPIVAITLLSLVYLAGLLAAAY
Q
LYYGTKYRRFPPWLETWLQCRKQLGLLSFFFAMVHVAYSLCLPMRRSERYLFLNMAYQQ
VHANIENSWN
E
EEVWRIEMYISFGIMSLGLLSLLAVTSIPSVSNALNWREFSFIQ
STLGYVALLISTFHVLIYGWKRAFE
E
EYYRFYTPPNFVLALVLPSIVIL
DLLQLCRYPD



Links Key
 Links to:   History report
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 Genome Browser Links:   Ensembl Genome Browser
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