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Report for CCDS43402.1 (current version)

CCDS Status Species Chrom. Gene CCDS Release NCBI Annotation Release Ensembl Annotation Release Links
43402.1 Public Homo sapiens 5 KIAA1191 24 110 108 CCDS HistoryNCBI Gene:57179Re-query CCDS DB by CCDS ID:43402.1Re-query CCDS DB by GeneID:57179See the combined annotation on chromosome 5 in Sequence Viewer

Public since: CCDS release 5, NCBI annotation release 36.3, Ensembl annotation release 47

Review status: Reviewed (by RefSeq and Havana)

Sequence IDs included in CCDS 43402.1

Original Current Source Nucleotide ID Protein ID MANE Status in CCDS Seq. Status Links
Original member Current member EBI ENST00000393725.6 ENSP00000377326.2 Accepted alive Link to Ensembl Transcript Viewer:ENST00000393725.6Link to Ensembl Protein Viewer:ENSP00000377326.2Re-query CCDS DB by Nucleotide ID:ENST00000393725Re-query CCDS DB by Protein ID:ENSP00000377326
Original member Current member EBI ENST00000614420.4 ENSP00000479627.1 Accepted alive Link to Ensembl Transcript Viewer:ENST00000614420.4Link to Ensembl Protein Viewer:ENSP00000479627.1Re-query CCDS DB by Nucleotide ID:ENST00000614420Re-query CCDS DB by Protein ID:ENSP00000479627
Original member Current member NCBI NM_001079684.3 NP_001073152.1 Accepted alive Link to Nucleotide Sequence:NM_001079684.3Link to Protein Sequence:NP_001073152.1Re-query CCDS DB by Nucleotide ID:NM_001079684Re-query CCDS DB by Protein ID:NP_001073152Link to BLAST:NP_001073152.1
Original member Current member NCBI NM_001287336.2 NP_001274265.1 Accepted alive Link to Nucleotide Sequence:NM_001287336.2Link to Protein Sequence:NP_001274265.1Re-query CCDS DB by Nucleotide ID:NM_001287336Re-query CCDS DB by Protein ID:NP_001274265Link to BLAST:NP_001274265.1

RefSeq Length Related UniProtKB/SwissProt Length Identity Gaps Mismatches
NP_001073152.1 286 Q96A73-2 286 100% 0 0
NP_001274265.1 286 Q96A73-2 286 100% 0 0

Chromosomal Locations for CCDS 43402.1

Assembly GRCh38.p14 (GCF_000001405.40)

On '-' strand of Chromosome 5 (NC_000005.10)
Genome Browser links: Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 5Link to Ensembl Genome Browser on chromosome 5See the combined annotation on chromosome 5 in Sequence Viewer

Chromosome Start Stop Links
5 176347600 176347808 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 5Link to Ensembl Genome Browser on chromosome 5
5 176347921 176348063 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 5Link to Ensembl Genome Browser on chromosome 5
5 176348250 176348356 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 5Link to Ensembl Genome Browser on chromosome 5
5 176350613 176350737 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 5Link to Ensembl Genome Browser on chromosome 5
5 176352622 176352748 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 5Link to Ensembl Genome Browser on chromosome 5
5 176355571 176355720 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 5Link to Ensembl Genome Browser on chromosome 5

CCDS Sequence Data
Blue highlighting indicates alternating exons.
Red highlighting indicates amino acids encoded across a splice junction.
 
Mouse over the nucleotide or protein sequence below and click on the highlighted codon or residue to select the pair.

Nucleotide Sequence (861 nt):
ATGTCCCTGCCCATCGGGATATACCGCCGGGCAGTCAGCTATGATGATACCCTCGAGGACCCTGCGCCCA
TGACTCCTCCTCCATCGGACATGGGCAGCGTCCCTTGGAAGCCAGTGATTCCAGAGCGCAAGTATCAGCA
CCTCGCCAAGGTGGAGGAAGGAGAGGCCAGTCTACCCTCCCCTGCCATGACCCTGTCATCAGCCATTGAC
AGTGTGGACAAGGTCCCAGTGGTGAAGGCTAAAGCTACCCATGTCATCATGAATTCTCTGATCACAAAAC
AGACCCAGGAAAGCATTCAGCATTTTGAGCGACAGGCAGGGCTGAGAGATGCTGGCTACACACCCCACAA
GGGCCTCACCACCGAGGAGACCAAGTACCTTCGAGTGGCCGAAGCACTCCACAAACTAAAGTTACAGAGT
GGAGAGGTAACAAAAGAAGAGAGGCAGCCTGCATCAGCCCAGTCCACCCCAAGCACCACTCCGCACTCTT
CACCTAAGCAGAGGCCCAGGGGCTGGTTCACTTCTGGTTCTTCCACAGCCTTACCTGGCCCAAATCCTAG
CACCATGGACTCTGGAAGTGGGGATAAGGACAGAAACTTGTCAGATAAGTGGAGCCTCTTTGGACCGAGA
TCCCTTCAGAAGTACGATTCTGGAAGTTTTGCCACCCAGGCCTACCGAGGAGCCCAGAAGCCCTCTCCAT
TGGAACTGATACGTGCCCAGGCCAACCGAATGGCTGAAGATCCAGCAGCCTTGAAGCCCCCCAAGATGGA
CATCCCAGTGATGGAAGGAAAGAAACAGCCACCACGGGCCCATAACCTCAAACCCCGTGACCTGAATGTG
CTCACACCCACTGGCTTCTAG

Translation (286 aa):
MSLPIGIYRRAVSYDDTLEDPAPMTPPPSDMGSVPWKPVIPERKYQHLAKVEEGEASLPSPAMTLSSAID
SVDKVPVVKAKATHVIMNSLITKQTQESIQHFERQAGLRDAGYTPHKGLTTEETKYLRVAEALHKLKLQS
GEVTKEERQPASAQSTPSTTPHSSPKQRPRGWFTSGSSTALPGPNPSTMDSGSGDKDRNLSDKWSLFGPR
SLQKYDSGSFATQAYRGAQKPSPLELIRAQANRMAEDPAALKPPKMDIPVMEGKKQPPRAHNLKPRDLNV
LTPTGF


Links Key
 Links to:   History report
  BLAST report
  Entrez Gene
  Nucleotide report
  Protein report
 Re-query CCDS DB by:   CCDS ID
  Gene ID
  Nucleotide ID
  Protein ID
 Genome Browser Links:   Ensembl Genome Browser
  NCBI Sequence Viewer
  UCSC Genome Browser
  VEGA Genome Browser

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