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Report for CCDS43152.1 (current version)

CCDS Status Species Chrom. Gene CCDS Release NCBI Annotation Release Ensembl Annotation Release Links
43152.1 Public Homo sapiens 3 CEP63 24 110 108 CCDS HistoryNCBI Gene:80254Re-query CCDS DB by CCDS ID:43152.1Re-query CCDS DB by GeneID:80254See the combined annotation on chromosome 3 in Sequence Viewer

Public since: CCDS release 5, NCBI annotation release 36.3, Ensembl annotation release 47

Review status: Reviewed (by RefSeq and Havana)

Sequence IDs included in CCDS 43152.1

Original Current Source Nucleotide ID Protein ID MANE Status in CCDS Seq. Status Links
Original member Current member EBI ENST00000354446.7 ENSP00000346432.3 Accepted alive Link to Ensembl Transcript Viewer:ENST00000354446.7Link to Ensembl Protein Viewer:ENSP00000346432.3Re-query CCDS DB by Nucleotide ID:ENST00000354446Re-query CCDS DB by Protein ID:ENSP00000346432
Original member Current member EBI ENST00000512894.6 ENSP00000423225.2 Accepted alive Link to Ensembl Transcript Viewer:ENST00000512894.6Link to Ensembl Protein Viewer:ENSP00000423225.2Re-query CCDS DB by Nucleotide ID:ENST00000512894Re-query CCDS DB by Protein ID:ENSP00000423225
Original member Current member EBI ENST00000620544.5 ENSP00000482219.1 Accepted alive Link to Ensembl Transcript Viewer:ENST00000620544.5Link to Ensembl Protein Viewer:ENSP00000482219.1Re-query CCDS DB by Nucleotide ID:ENST00000620544Re-query CCDS DB by Protein ID:ENSP00000482219
Original member Current member NCBI NM_001042384.2 NP_001035843.1 Accepted alive Link to Nucleotide Sequence:NM_001042384.2Link to Protein Sequence:NP_001035843.1Re-query CCDS DB by Nucleotide ID:NM_001042384Re-query CCDS DB by Protein ID:NP_001035843Link to BLAST:NP_001035843.1
Original member Current member NCBI NM_001353123.2 NP_001340052.1 Accepted alive Link to Nucleotide Sequence:NM_001353123.2Link to Protein Sequence:NP_001340052.1Re-query CCDS DB by Nucleotide ID:NM_001353123Re-query CCDS DB by Protein ID:NP_001340052Link to BLAST:NP_001340052.1
Original member Current member NCBI NM_001353124.2 NP_001340053.1 Accepted alive Link to Nucleotide Sequence:NM_001353124.2Link to Protein Sequence:NP_001340053.1Re-query CCDS DB by Nucleotide ID:NM_001353124Re-query CCDS DB by Protein ID:NP_001340053Link to BLAST:NP_001340053.1

RefSeq Length Related UniProtKB/SwissProt Length Identity Gaps Mismatches
NP_001035843.1 475 Q96MT8-4 475 100% 0 0
NP_001340052.1 475 Q96MT8-4 475 100% 0 0
NP_001340053.1 475 Q96MT8-4 475 100% 0 0

Chromosomal Locations for CCDS 43152.1

Assembly GRCh38.p14 (GCF_000001405.40)

On '+' strand of Chromosome 3 (NC_000003.12)
Genome Browser links: Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 3Link to Ensembl Genome Browser on chromosome 3See the combined annotation on chromosome 3 in Sequence Viewer

Chromosome Start Stop Links
3 134495321 134495364 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 3Link to Ensembl Genome Browser on chromosome 3
3 134507109 134507286 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 3Link to Ensembl Genome Browser on chromosome 3
3 134531845 134531940 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 3Link to Ensembl Genome Browser on chromosome 3
3 134532778 134532900 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 3Link to Ensembl Genome Browser on chromosome 3
3 134537155 134537268 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 3Link to Ensembl Genome Browser on chromosome 3
3 134545586 134545819 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 3Link to Ensembl Genome Browser on chromosome 3
3 134546149 134546288 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 3Link to Ensembl Genome Browser on chromosome 3
3 134549062 134549176 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 3Link to Ensembl Genome Browser on chromosome 3
3 134550063 134550260 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 3Link to Ensembl Genome Browser on chromosome 3
3 134551926 134552012 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 3Link to Ensembl Genome Browser on chromosome 3
3 134574793 134574891 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 3Link to Ensembl Genome Browser on chromosome 3

CCDS Sequence Data
Blue highlighting indicates alternating exons.
Red highlighting indicates amino acids encoded across a splice junction.
 
Mouse over the nucleotide or protein sequence below and click on the highlighted codon or residue to select the pair.

Nucleotide Sequence (1428 nt):
ATGGAGGCTTTGTTAGAAGGAATACAAAATCGAGGGCATGGTGGGGGATTTTTGACATCTTGTGAAGCAG
AACTACAGGAGCTCATGAAACAGATTGACATAATGGTGGCTCATAAAAAATCTGAATGGGAAGGACGTAC
ACATGCTCTAGAAACTTGCTTGAAAATCCGTGAACAGGAACTTAAGAGTCTTAGGAGTCAGTTGGATGTG
ACACATAAGGAGGTTGGAATGTTGCATCAGCAGGTAGAAGAACATGAAAAAATCAAGCAAGAGATGACCA
TGGAATATAAGCAGGAGTTGAAGAAACTACATGAAGAATTATGCATACTGAAGAGAAGCTATGAAAAGCT
TCAGAAAAAGCAAATGAGGGAATTCAGAGGAAATACCAAAAATCACAGGGAAGATCGGTCTGAAATTGAG
AGGTTAACTGCAAAAATAGAGGAATTCCGTCAGAAATCGCTGGACTGGGAGAAGCAACGCTTGATTTATC
AGCAACAGGTATCTTCACTGGAGGCACAAAGGAAGGCTCTGGCTGAACAATCAGAGATAATTCAGGCTCA
GCTTGTCAATCGGAAACAGAAATTAGAGTCTGTGGAACTTTCTAGCCAATCAGAAATTCAACACTTAAGC
AGTAAACTGGAGCGGGCTAATGACACTATCTGTGCCAATGAGTTGGAAATAGAGCGCCTCACCATGAGGG
TCAATGACTTGGTTGGAACCAGTATGACTGTCCTACAGGAGCAGCAGCAAAAAGAAGAAAAATTGAGGGA
ATCTGAAAAACTATTAGAGGCTCTGCAGGAAGAAAAGAGAGAATTGAAGGCAGCTCTTCAGTCTCAAGAA
AATCTCATACATGAGGCCAGAATACAAAAGGAGAAGTTACAAGAAAAAGTAAAGGCAACTAACACTCAAC
ATGCTGTAGAAGCTATAAGTTTGGAATCTGTGAGTGCAACGTGTAAACAGCTGAGCCAAGAACTAATGGA
AAAATATGAAGAACTGAAGAGGATGGAAGCACATAACAATGAATACAAAGCAGAGATTAAGAAGTTGAAA
GAACAGATTTTACAGGGTGAACAAAGTTACAGTTCTGCACTAGAAGGAATGAAGATGGAAATCTCCCATC
TAACTCAGGAGTTACATCAGCGAGATATCACTATTGCTTCCACCAAAGGTTCTTCCTCAGACATGGAAAA
GCGACTCAGAGCAGAGATGCAAAAGGCAGAAGACAAAGCAGTAGAGCATAAGGAGATTTTGGATCAGCTG
GAGTCACTCAAATTAGAAAATCGTCATCTTTCTGAAATGGTGATGAAATTGGAATTGGGTTTACATGAGA
GATGGGGTTTTACCATGTTGTCCAGTCTGGTTTTGAACTTCGGGATTCAAGCAATCCGCCAGCCTCAGCG
TCCCAAAGTGCTGGAATTACAAGTGTGA

Translation (475 aa):
MEALLEGIQNRGHGGGFLTSCEAELQELMKQIDIMVAHKKSEWEGRTHALETCLKIREQELKSLRSQLDV
THKEVGMLHQQVEEHEKIKQEMTMEYKQELKKLHEELCILKRSYEKLQKKQMREFRGNTKNHREDRSEIE
RLTAKIEEFRQKSLDWEKQRLIYQQQVSSLEAQRKALAEQSEIIQAQLVNRKQKLESVELSSQSEIQHLS
SKLERANDTICANELEIERLTMRVNDLVGTSMTVLQEQQQKEEKLRESEKLLEALQEEKRELKAALQSQE
NLIHEARIQKEKLQEKVKATNTQHAVEAISLESVSATCKQLSQELMEKYEELKRMEAHNNEYKAEIKKLK
EQILQGEQSYSSALEGMKMEISHLTQELHQRDITIASTKGSSSDMEKRLRAEMQKAEDKAVEHKEILDQL
ESLKLENRHLSEMVMKLELGLHERWGFTMLSSLVLNFGIQAIRQPQRPKVLELQV


Links Key
 Links to:   History report
  BLAST report
  Entrez Gene
  Nucleotide report
  Protein report
 Re-query CCDS DB by:   CCDS ID
  Gene ID
  Nucleotide ID
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 Genome Browser Links:   Ensembl Genome Browser
  NCBI Sequence Viewer
  UCSC Genome Browser
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