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Report for CCDS43118.1 (current version)

CCDS Status Species Chrom. Gene CCDS Release NCBI Annotation Release Ensembl Annotation Release Links
43118.1 Public Homo sapiens 3 FILIP1L 24 110 108 CCDS HistoryNCBI Gene:11259Re-query CCDS DB by CCDS ID:43118.1Re-query CCDS DB by GeneID:11259See the combined annotation on chromosome 3 in Sequence Viewer

Public since: CCDS release 5, NCBI annotation release 36.3, Ensembl annotation release 47

Review status: Reviewed (by RefSeq and Havana)

Sequence IDs included in CCDS 43118.1

Original Current Source Nucleotide ID Protein ID MANE Status in CCDS Seq. Status Links
Original member Current member EBI ENST00000331335.9 ENSP00000327880.5 Accepted alive Link to Ensembl Transcript Viewer:ENST00000331335.9Link to Ensembl Protein Viewer:ENSP00000327880.5Re-query CCDS DB by Nucleotide ID:ENST00000331335Re-query CCDS DB by Protein ID:ENSP00000327880
Original member Current member NCBI NM_001042459.3 NP_001035924.1 Accepted alive Link to Nucleotide Sequence:NM_001042459.3Link to Protein Sequence:NP_001035924.1Re-query CCDS DB by Nucleotide ID:NM_001042459Re-query CCDS DB by Protein ID:NP_001035924Link to BLAST:NP_001035924.1

RefSeq Length Related UniProtKB/SwissProt Length Identity Gaps Mismatches
NP_001035924.1 1133 Q4L180-2 1133 100% 0 0

Chromosomal Locations for CCDS 43118.1

Assembly GRCh38.p14 (GCF_000001405.40)

On '-' strand of Chromosome 3 (NC_000003.12)
Genome Browser links: Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 3Link to Ensembl Genome Browser on chromosome 3See the combined annotation on chromosome 3 in Sequence Viewer

Chromosome Start Stop Links
3 99848274 99851070 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 3Link to Ensembl Genome Browser on chromosome 3
3 99924230 99924408 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 3Link to Ensembl Genome Browser on chromosome 3
3 99929856 99930029 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 3Link to Ensembl Genome Browser on chromosome 3
3 99930769 99931020 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 3Link to Ensembl Genome Browser on chromosome 3

CCDS Sequence Data
Blue highlighting indicates alternating exons.
Red highlighting indicates amino acids encoded across a splice junction.
 
Mouse over the nucleotide or protein sequence below and click on the highlighted codon or residue to select the pair.

Nucleotide Sequence (3402 nt):
ATGCGTTCCAGAGGCAGTGATACCGAGGGCTCAGCCCAAAAGAAATTTCCAAGACATACTAAAGGCCACA
GTTTCCAAGGGCCTAAAAACATGAAGCATAGACAGCAAGACAAAGACTCCCCCAGTGAGTCGGATGTAAT
ACTTCCGTGTCCCAAGGCAGAGAAGCCACACAGTGGTAATGGCCACCAAGCAGAAGACCTCTCAAGAGAT
GACCTGTTATTTCTCCTCAGCATTCTGGAGGGAGAACTGCAGGCTCGAGATGAGGTCATAGGCATTTTAA
AGGCTGAAAAAATGGACCTGGCTTTGCTGGAAGCTCAGTATGGGTTTGTCACTCCAAAAAAGGTGTTAGA
GGCTCTCCAGAGAGATGCTTTTCAAGCGAAATCTACCCCTTGGCAGGAGGACATCTATGAGAAACCAATG
AATGAGTTGGACAAAGTTGTGGAAAAACATAAAGAATCTTACAGACGAATCCTGGGACAGCTTTTAGTGG
CAGAAAAATCCCGTAGGCAAACCATATTGGAGTTGGAGGAAGAAAAGAGAAAACATAAAGAATACATGGA
GAAGAGTGATGAATTCATATGCCTACTAGAACAGGAATGTGAAAGATTAAAGAAGCTAATTGATCAAGAA
ATCAAGTCTCAGGAGGAGAAGGAGCAAGAAAAGGAGAAAAGGGTCACCACCCTGAAAGAGGAGCTGACCA
AGCTGAAGTCTTTTGCTTTGATGGTGGTGGATGAACAGCAAAGGCTGACGGCACAGCTCACCCTTCAAAG
ACAGAAAATCCAAGAGCTGACCACAAATGCAAAGGAAACACATACCAAACTAGCCCTTGCTGAAGCCAGA
GTTCAGGAGGAAGAGCAGAAGGCAACCAGACTAGAGAAGGAACTGCAAACGCAGACCACAAAGTTTCACC
AAGACCAAGACACAATTATGGCGAAGCTCACCAATGAGGACAGTCAAAATCGCCAGCTTCAACAAAAGCT
GGCAGCACTCAGCCGGCAGATTGATGAGTTAGAAGAGACAAACAGGTCTTTACGAAAAGCAGAAGAGGAG
CTGCAAGATATAAAAGAAAAAATCAGTAAGGGAGAATATGGAAACGCTGGTATCATGGCTGAAGTGGAAG
AGCTCAGGAAACGTGTGCTAGATATGGAAGGGAAAGATGAAGAGCTCATAAAAATGGAGGAGCAGTGCAG
AGATCTCAATAAGAGGCTTGAAAGGGAGACGTTACAGAGTAAAGACTTTAAACTAGAGGTTGAAAAACTC
AGTAAAAGAATTATGGCTCTGGAAAAGTTAGAAGACGCTTTCAACAAAAGCAAACAAGAATGCTACTCTC
TGAAATGCAATTTAGAAAAAGAAAGGATGACCACAAAGCAGTTGTCTCAAGAACTGGAGAGTTTAAAAGT
AAGGATCAAAGAGCTAGAAGCCATTGAAAGTCGGCTAGAAAAGACAGAATTCACTCTAAAAGAGGATTTA
ACTAAACTGAAAACATTAACTGTGATGTTTGTAGATGAACGGAAAACAATGAGTGAAAAATTAAAGAAAA
CTGAAGATAAATTACAAGCTGCTTCTTCTCAGCTTCAAGTGGAGCAAAATAAAGTAACAACAGTTACTGA
GAAGTTAATTGAGGAAACTAAAAGGGCGCTCAAGTCCAAAACCGATGTAGAAGAAAAGATGTACAGCGTA
ACCAAGGAGAGAGATGATTTAAAAAACAAATTGAAAGCGGAAGAAGAGAAAGGAAATGATCTCCTGTCAA
GAGTTAATATGTTGAAAAATAGGCTTCAATCATTGGAAGCAATTGAGAAAGATTTCCTAAAAAACAAATT
AAATCAAGACTCTGGGAAATCCACAACAGCATTACACCAAGAAAACAATAAGATTAAGGAGCTCTCTCAA
GAAGTGGAAAGACTGAAACTGAAGCTAAAGGACATGAAAGCCATTGAGGATGACCTCATGAAAACAGAAG
ATGAATATGAGACTCTAGAACGAAGGTATGCTAATGAACGAGACAAAGCTCAATTTTTATCTAAAGAGCT
AGAACATGTTAAAATGGAACTTGCTAAGTACAAGTTAGCAGAAAAGACAGAGACCAGCCATGAACAATGG
CTTTTCAAAAGGCTTCAAGAAGAAGAAGCTAAGTCAGGGCACCTCTCAAGAGAAGTGGATGCATTAAAAG
AGAAAATTCATGAATACATGGCAACTGAAGACCTAATATGTCACCTCCAGGGAGATCACTCAGTCCTGCA
AAAAAAACTAAATCAACAAGAAAACAGGAACAGAGATTTAGGAAGAGAGATTGAAAACCTCACTAAGGAG
TTAGAGAGGTACCGGCATTTCAGTAAGAGCCTCAGGCCTAGTCTCAATGGAAGAAGAATTTCCGATCCTC
AAGTATTTTCTAAAGAAGTTCAGACAGAAGCAGTAGACAATGAACCACCTGATTACAAGAGCCTCATTCC
TCTGGAACGTGCAGTCATCAATGGTCAGTTATATGAGGAGAGTGAGAATCAAGACGAGGACCCTAATGAT
GAGGGATCTGTGCTGTCCTTCAAATGCAGCCAGTCTACTCCATGTCCTGTTAACAGAAAGCTATGGATTC
CCTGGATGAAATCCAAGGAGGGCCATCTTCAGAATGGAAAAATGCAAACTAAACCCAATGCCAACTTTGT
GCAACCTGGAGATCTAGTCCTAAGCCACACACCTGGGCAGCCACTTCATATAAAGGTTACTCCAGACCAT
GTACAAAACACAGCCACTCTTGAAATCACAAGTCCAACCACAGAGAGTCCTCACTCTTACACGAGTACTG
CAGTGATACCGAACTGTGGCACGCCAAAGCAAAGGATAACCATCCTCCAAAACGCCTCCATAACACCAGT
AAAGTCCAAAACCTCTACCGAAGACCTCATGAATTTAGAACAAGGCATGTCCCCAATTACCATGGCAACC
TTTGCCAGAGCACAGACCCCAGAGTCTTGTGGTTCTCTAACTCCAGAAAGGACAATGTCCCCTATTCAGG
TTTTGGCTGTGACTGGTTCAGCTAGCTCTCCTGAGCAGGGACGCTCCCCAGAACCAACAGAAATCAGTGC
CAAGCATGCGATATTCAGAGTCTCCCCAGACCGGCAGTCATCATGGCAGTTTCAGCGTTCAAACAGCAAT
AGCTCAAGTGTGATAACTACTGAGGATAATAAAATCCACATTCACTTAGGAAGTCCTTACATGCAAGCTG
TAGCCAGCCCTGTGAGACCTGCCAGCCCTTCAGCACCACTGCAGGATAACCGAACTCAAGGCTTAATTAA
CGGGGCACTAAACAAAACAACCAATAAAGTCACCAGCAGTATTACTATCACACCAACAGCCACACCTCTT
CCTCGACAATCACAAATTACAGTAAGTAATATATATAACTGA

Translation (1133 aa):
MRSRGSDTEGSAQKKFPRHTKGHSFQGPKNMKHRQQDKDSPSESDVILPCPKAEKPHSGNGHQAEDLSRD
DLLFLLSILEGELQARDEVIGILKAEKMDLALLEAQYGFVTPKKVLEALQRDAFQAKSTPWQEDIYEKPM
NELDKVVEKHKESYRRILGQLLVAEKSRRQTILELEEEKRKHKEYMEKSDEFICLLEQECERLKKLIDQE
IKSQEEKEQEKEKRVTTLKEELTKLKSFALMVVDEQQRLTAQLTLQRQKIQELTTNAKETHTKLALAEAR
VQEEEQKATRLEKELQTQTTKFHQDQDTIMAKLTNEDSQNRQLQQKLAALSRQIDELEETNRSLRKAEEE
LQDIKEKISKGEYGNAGIMAEVEELRKRVLDMEGKDEELIKMEEQCRDLNKRLERETLQSKDFKLEVEKL
SKRIMALEKLEDAFNKSKQECYSLKCNLEKERMTTKQLSQELESLKVRIKELEAIESRLEKTEFTLKEDL
TKLKTLTVMFVDERKTMSEKLKKTEDKLQAASSQLQVEQNKVTTVTEKLIEETKRALKSKTDVEEKMYSV
TKERDDLKNKLKAEEEKGNDLLSRVNMLKNRLQSLEAIEKDFLKNKLNQDSGKSTTALHQENNKIKELSQ
EVERLKLKLKDMKAIEDDLMKTEDEYETLERRYANERDKAQFLSKELEHVKMELAKYKLAEKTETSHEQW
LFKRLQEEEAKSGHLSREVDALKEKIHEYMATEDLICHLQGDHSVLQKKLNQQENRNRDLGREIENLTKE
LERYRHFSKSLRPSLNGRRISDPQVFSKEVQTEAVDNEPPDYKSLIPLERAVINGQLYEESENQDEDPND
EGSVLSFKCSQSTPCPVNRKLWIPWMKSKEGHLQNGKMQTKPNANFVQPGDLVLSHTPGQPLHIKVTPDH
VQNTATLEITSPTTESPHSYTSTAVIPNCGTPKQRITILQNASITPVKSKTSTEDLMNLEQGMSPITMAT
FARAQTPESCGSLTPERTMSPIQVLAVTGSASSPEQGRSPEPTEISAKHAIFRVSPDRQSSWQFQRSNSN
SSSVITTEDNKIHIHLGSPYMQAVASPVRPASPSAPLQDNRTQGLINGALNKTTNKVTSSITITPTATPL
PRQSQITVSNIYN


Links Key
 Links to:   History report
  BLAST report
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  Nucleotide report
  Protein report
 Re-query CCDS DB by:   CCDS ID
  Gene ID
  Nucleotide ID
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 Genome Browser Links:   Ensembl Genome Browser
  NCBI Sequence Viewer
  UCSC Genome Browser
  VEGA Genome Browser

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