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Report for CCDS42766.1 (current version)

CCDS Status Species Chrom. Gene CCDS Release NCBI Annotation Release Ensembl Annotation Release Links
42766.1 Public Homo sapiens 2 TANC1 24 110 108 CCDS HistoryNCBI Gene:85461Re-query CCDS DB by CCDS ID:42766.1Re-query CCDS DB by GeneID:85461See the combined annotation on chromosome 2 in Sequence Viewer

Public since: CCDS release 5, NCBI annotation release 36.3, Ensembl annotation release 47

Review status: Reviewed (by RefSeq and Havana)

Sequence IDs included in CCDS 42766.1

Original Current Source Nucleotide ID Protein ID MANE Status in CCDS Seq. Status Links
Original member Current member EBI ENST00000263635.8 ENSP00000263635.6 MANE Select Accepted alive Link to Ensembl Transcript Viewer:ENST00000263635.8Link to Ensembl Protein Viewer:ENSP00000263635.6Re-query CCDS DB by Nucleotide ID:ENST00000263635Re-query CCDS DB by Protein ID:ENSP00000263635
Original member Current member NCBI NM_033394.3 NP_203752.2 MANE Select Accepted alive Link to Nucleotide Sequence:NM_033394.3Link to Protein Sequence:NP_203752.2Re-query CCDS DB by Nucleotide ID:NM_033394Re-query CCDS DB by Protein ID:NP_203752Link to BLAST:NP_203752.2

RefSeq Length Related UniProtKB/SwissProt Length Identity Gaps Mismatches
NP_203752.2 1861 Q9C0D5-1 1861 100% 0 0

Chromosomal Locations for CCDS 42766.1

Assembly GRCh38.p14 (GCF_000001405.40)

On '+' strand of Chromosome 2 (NC_000002.12)
Genome Browser links: Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 2Link to Ensembl Genome Browser on chromosome 2See the combined annotation on chromosome 2 in Sequence Viewer

Chromosome Start Stop Links
2 159065911 159065971 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 2Link to Ensembl Genome Browser on chromosome 2
2 159097637 159097834 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 2Link to Ensembl Genome Browser on chromosome 2
2 159136194 159136298 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 2Link to Ensembl Genome Browser on chromosome 2
2 159149142 159149272 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 2Link to Ensembl Genome Browser on chromosome 2
2 159150370 159150556 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 2Link to Ensembl Genome Browser on chromosome 2
2 159163283 159163546 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 2Link to Ensembl Genome Browser on chromosome 2
2 159169250 159169372 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 2Link to Ensembl Genome Browser on chromosome 2
2 159170524 159170805 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 2Link to Ensembl Genome Browser on chromosome 2
2 159172121 159172272 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 2Link to Ensembl Genome Browser on chromosome 2
2 159174953 159175184 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 2Link to Ensembl Genome Browser on chromosome 2
2 159176352 159176518 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 2Link to Ensembl Genome Browser on chromosome 2
2 159178556 159179163 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 2Link to Ensembl Genome Browser on chromosome 2
2 159185791 159185899 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 2Link to Ensembl Genome Browser on chromosome 2
2 159186902 159187024 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 2Link to Ensembl Genome Browser on chromosome 2
2 159194257 159194493 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 2Link to Ensembl Genome Browser on chromosome 2
2 159196608 159196793 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 2Link to Ensembl Genome Browser on chromosome 2
2 159198975 159199053 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 2Link to Ensembl Genome Browser on chromosome 2
2 159217497 159217630 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 2Link to Ensembl Genome Browser on chromosome 2
2 159219238 159219361 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 2Link to Ensembl Genome Browser on chromosome 2
2 159219692 159219867 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 2Link to Ensembl Genome Browser on chromosome 2
2 159224232 159224364 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 2Link to Ensembl Genome Browser on chromosome 2
2 159225688 159225779 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 2Link to Ensembl Genome Browser on chromosome 2
2 159227819 159227965 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 2Link to Ensembl Genome Browser on chromosome 2
2 159228796 159228896 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 2Link to Ensembl Genome Browser on chromosome 2
2 159229578 159231012 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 2Link to Ensembl Genome Browser on chromosome 2

CCDS Sequence Data
Blue highlighting indicates alternating exons.
Red highlighting indicates amino acids encoded across a splice junction.
 
Mouse over the nucleotide or protein sequence below and click on the highlighted codon or residue to select the pair.

Nucleotide Sequence (5586 nt):
ATGTTAAAGGCTGTGCTGAAGAAGAGCCGAGAGGGAGGAAAGGGAGGCAAGAAGGAAGCAGGAAGTGACT
TTGGTCCAGAGACTTCTCCAGTCCTGCACCTTGACCACAGTGCTGACTCTCCTGTGAGCAGTCTTCCCAC
AGCAGAGGACACCTATAGGGTGAGCTTGGCCAAAGGTGTCTCGATGTCTCTGCCTTCCTCACCTTTGCTG
CCTCGACAGTCTCACTTGGTGCAATCAAGAGTGAACAAAAAATCCCCAGGTCCCGTCAGGAAGCCCAAGT
ATGTGGAAAGCCCCAGAGTGCCTGGAGATGCAGTTATAATGCCATTCAGAGAAGTAGCCAAGCCAACAGA
GCCTGATGAGCATGAAGCAAAGGCCGATAATGAACCGAGCTGTTCGCCGGCAGCTCAAGAACTGTTGACA
AGGCTGGGATTTTTACTGGGAGAAGGGATCCCAAGTGCCACACACATAACCATTGAAGACAAAAATGAAA
CCATGTGCACAGCTCTGAGTCAAGGCATCAGTCCTTGCTCCACACTAACAAGCAGCACCGCATCTCCTAG
CACCGATAGCCCCTGCTCAACCTTGAATAGCTGTGTCAGCAAGACGGCAGCCAACAAAAGTCCCTGTGAG
ACCATTAGCAGCCCTAGTTCCACCCTGGAAAGCAAGGACAGTGGAATTATAGCCACAATTACAAGTTCAT
CCGAAAATGATGACCGGAGTGGCTCCAGTTTGGAATGGAATAAAGATGGAAACCTAAGATTAGGGGTTCA
GAAGGGAGTGCTTCATGACCGCAGGGCAGATAACTGCTCCCCAGTGGCAGAAGAGGAGACCACCGGGTCA
GCAGAGAGCACGCTGCCCAAAGCAGAATCCTCAGCTGGAGATGGTCCAGTCCCTTATTCTCAGGGCTCCA
GCTCACTAATAATGCCACGGCCCAACTCAGTTGCAGCAACAAGCTCAACCAAATTGGAAGATCTGAGTTA
TTTAGACGGGCAGAGAAATGCTCCTCTACGGACGTCAATTAGATTACCATGGCACAATACGGCCGGAGGT
AGGGCACAGGAAGTTAAAGCACGATTTGCTCCCTACAAGCCACAAGACATTTTGTTGAAACCCTTGTTGT
TTGAAGTACCAAGCATAACAACAGACTCTGTGTTTGTGGGAAGGGATTGGCTCTTTCACCAGATAGAAGA
AAACTTGAGGAACACAGAACTGGCAGAAAACAGAGGCGCGGTGGTGGTTGGCAATGTGGGATTTGGGAAG
ACGGCAATCATTTCCAAGTTGGTGGCCCTGAGCTGCCACGGAAGCCGCATGAGGCAGATTGCTTCCAACA
GCCCGGGTTCATCACCTAAAACCTCTGACCCCACTCAGGATCTTCATTTCACTCCGTTGCTTTCACCGAG
TTCTTCCACAAGTGCTTCCAGCACAGCTAAAACACCTCTTGGGTCTATCAGTGCTGAAAACCAGAGACCA
AGAGAGGATGCAGTGAAATATCTTGCTTCTAAGGTGGTGGCCTACCACTACTGCCAGGCTGACAACACGT
ACACTTGCCTGGTGCCCGAGTTTGTGCACAGCATCGCAGCTTTGCTCTGCCGGTCCCATCAGCTGGCCGC
CTACAGAGACCTTCTGATAAAGGAGCCCCAACTACAGAGCATGCTGAGCCTCCGATCCTGTGTGCAGGAC
CCGGTGGCAGCTTTCAAGAGGGGAGTGCTGGAGCCACTCACAAACCTGAGAAATGAGCAGAAAATTCCTG
AAGAAGAATACATTATTTTGATAGATGGCTTAAATGAAGCTGAGTTTCATAAACCTGATTATGGAGATAC
GCTTTCTTCATTTATTACCAAAATTATTTCTAAATTTCCTGCCTGGTTGAAGTTGATTGTGACTGTAAGA
GCAAATTTTCAGGAAATCATAAGTGCGCTGCCATTTGTCAAGCTTTCCTTAGATGACTTCCCAGACAACA
AAGACATCCACAGTGACCTGCACGCCTACGTCCAGCACAGGGTGCACAGCAGCCAGGACATCCTCAGCAA
CATCTCCCTGAATGGCAAGGCCGATGCCACACTCATTGGAAAAGTGAGCAGCCACCTGGTGCTGCGGAGC
CTCGGCTCCTACCTGTACCTCAAGCTCACCCTGGACCTTTTCCAGAGGGGCCACTTGGTCATTAAGAGTG
CCAGCTACAAGGTGGTGCCCGTGTCTCTCTCTGAGCTCTATTTGCTTCAGTGCAACATGAAGTTCATGAC
CCAGTCCGCCTTTGAGAGGGCACTTCCGATTCTCAACGTGGCCCTCGCATCCCTCCACCCCATGACAGAC
GAGCAGATCTTTCAGGCTATTAATGCTGGCCACATCCAGGGGGAGCAGGGATGGGAAGACTTTCAGCAGA
GGATGGACGCCCTCTCCTGCTTCCTCATTAAGAGGCGAGACAAAACCCGCATGTTCTGCCACCCGTCCTT
CAGGGAGTGGCTTGTATGGAGAGCAGACGGGGAAAACACGGCCTTCCTGTGTGAGCCCAGGAACGGGCAC
GCGCTCTTGGCATTCATGTTCTCGCGTCAGGAGGGCAAGTTGAACCGCCAGCAGACCATGGAGCTTGGCC
ACCACATCCTGAAGGCGCACATTTTCAAGGGCCTCAGTAAGAAGACGGGAATTTCTTCAAGCCATCTCCA
AGCCCTGTGGATCGGCTACAGCACCGAGGGGCTGTCCGCCGCCCTGGCCTCTCTCAGGAATCTCTATACT
CCCAACGTGAAGGTGAGCCGTCTCCTGATTTTGGGAGGGGCCAACGTGAACTACAGGACAGAAGTGTTAA
ATAATGCCCCAATCCTGTGCGTCCAGTCTCACCTTGGCCACGAGGAAGTTGTCACTCTGCTCCTGGAATT
TGGTGCCTGCCTGGACGGAACGTCAGAGAACGGCATGACTGCCCTCTGTTACGCAGCAGCTGCTGGCCAC
ATGAAGCTGGTGTGTCTGCTGACCAAGAAGGGAGTGAGAGTGGACCACTTGGATAAGAAGGGCCAGTGTG
CGCTTGTCCACAGTGCCCTACGGGGCCACGGTGACATTCTCCAGTACCTGCTGACTTGTGAGTGGTCGCC
GGGTCCTCCCCAGCCAGGCACCCTGAGGAAGAGCCACGCCCTGCAGCAGGCGCTGACCGCGGCGGCCAGC
ATGGGCCACAGCTCGGTGGTCCAGTGCTTGCTGGGGATGGAGAAGGAACATGAAGTAGAAGTCAATGGCA
CCGACACATTGTGGGGAGAAACAGCCCTGACTGCCGCCGCAGGAAGAGGGAAGCTGGAGGTCTGTGAGCT
GCTGCTGGGGCATGGAGCTGCTGTGTCGCGGACAAACAGGAGAGGGGTTCCACCTTTGTTTTGTGCAGCA
CGCCAGGGGCATTGGCAGATTGTTAGACTGCTGTTGGAACGCGGCTGTGATGTGAACCTAAGTGACAAGC
AAGGCCGGACGCCCCTCATGGTGGCTGCTTGTGAAGGGCACTTGAGCACCGTGGAATTCCTCCTTTCAAA
AGGTGCAGCCCTTTCTTCTCTAGACAAAGAGGGTCTGTCAGCATTAAGCTGGGCTTGTCTGAAAGGTCAC
AGGGCAGTGGTCCAGTATCTGGTTGAAGAAGGAGCTGCAATAGACCAGACAGACAAGAATGGCCGCACAC
CCTTGGACCTGGCTGCCTTCTATGGCGATGCCGAGACTGTGCTGTACCTGGTGGAGAAGGGAGCCGTGAT
CGAGCATGTGGACCACAGCGGGATGCGGCCCTTGGACAGAGCCATCGGCTGCCGGAACACATCTGTAGTG
GTGGCGCTACTCAGAAAGGGAGCCAAGTTAGGAAATGCTGCTTGGGCGATGGCCACTTCCAAACCTGATA
TCTTGATTATACTTTTACAGAAATTAATGGAGGAAGGAAATGTGATGTACAAAAAAGGGAAAATGAAAGA
GGCAGCCCAGAGGTACCAGTATGCCTTAAGAAAGTTTCCTCGAGAAGGATTCGGAGAGGACATGAGACCC
TTCAATGAATTAAGGGTTTCCCTCTATCTCAATTTGTCGCGATGCCGAAGAAAAACAAATGACTTTGGCA
TGGCAGAGGAATTTGCTTCCAAGGCTCTCGAATTGAAGCCCAAGTCCTATGAAGCCTTTTATGCCAGAGC
AAGAGCGAAGAGAAATAGCAGGCAATTCGTGGCAGCTCTGGCTGACCTGCAAGAGGCTGTGAAACTCTGT
CCCACCAATCAGGAAGTCAAGAGGCTTCTGGCCCGCGTAGAAGAGGAGTGCAAACAACTCCAGAGGAGTC
AACAGCAAAAACAGCAGGGCCCGCTACCAGCTCCACTCAACGACTCCGAGAACGAAGAGGACACCCCAAC
CCCTGGCTTAAGTGACCACTTTCACTCTGAGGAGACTGAAGAGGAAGAAACTTCTCCCCAGGAAGAATCT
GTTTCCCCAACTCCCAGGTCCCAGCCATCCTCATCTGTCCCTTCCTCATACATCCGAAACCTTCAAGAAG
GGTTACAGTCCAAAGGAAGGCCGGTATCGCCACAGAGCAGGGCAGGAATCGGCAAGTCCCTGAGAGAGCC
TGTGGCCCAGCCAGGGCTGCTCCTGCAGCCCTCCAAGCAGGCCCAGATCGTGAAAACCAGCCAGCACCTG
GGCTCTGGCCAGTCGGCAGTGAGAAATGGCAGTATGAAAGTTCAGATCTCTTCTCAGAACCCTCCTCCAA
GTCCCATGCCAGGGAGAATCGCTGCCACTCCTGCTGGGAGCAGAACCCAGCATTTAGAGGGAACAGGTAC
TTTCACTACAAGAGCTGGTTGTGGCCACTTTGGGGATCGGCTGGGCCCCAGCCAGAATGTCCGCCTGCAG
TGTGGTGAGAATGGCCCTGCACACCCTTTACCAAGTAAGACGAAAACCACAGAGAGGCTTCTGTCTCATT
CCTCCGTGGCTGTGGACGCAGCCCCTCCAAACCAAGGTGGGCTGGCGACCTGCAGCGACGTGCGACACCC
AGCTTCCCTCACCAGCTCAGGCTCTTCTGGTTCTCCATCCAGCAGCATAAAGATGTCAAGTTCAACCAGT
AGTTTGACTTCGAGCAGCAGTTTTTCAGATGGCTTCAAGGTCCAAGGACCAGATACTAGAATTAAAGACA
AGGTTGTAACCCACGTTCAGAGCGGTACAGCTGAGCACAGACCCCGCAACACGCCGTTCATGGGCATCAT
GGATAAGACTGCGAGGTTCCAACAGCAGAGCAATCCTCCAAGCCGCAGCTGGCACTGTCCGGCACCAGAG
GGGCTGCTGACAAACACGTCTTCTGCAGCTGGCCTGCAGTCTGCTAACACTGAGAAGCCCTCTCTCATGC
AAGTGGGAGGATATAATAACCAAGCCAAAACCTGTTCTGTTTCTACCCTGAGTGCAAGTGTCCACAATGG
GGCACAAGTGAAGGAGCTAGAAGAAAGCAAGTGCCAAATTCCAGTCCACTCTCAAGAGAACAGGATAACT
AAGACTGTTTCTCATCTGTACCAGGAAAGTATCTCCAAACAGCAGCCTCATATTAGTAATGAAGCCCACA
GGAGCCACCTCACTGCAGCCAAACCAAAGCGATCATTTATAGAGTCAAATGTGTGA

Translation (1861 aa):
MLKAVLKKSREGGKGGKKEAGSDFGPETSPVLHLDHSADSPVSSLPTAEDTYRVSLAKGVSMSLPSSPLL
PRQSHLVQSRVNKKSPGPVRKPKYVESPRVPGDAVIMPFREVAKPTEPDEHEAKADNEPSCSPAAQELLT
RLGFLLGEGIPSATHITIEDKNETMCTALSQGISPCSTLTSSTASPSTDSPCSTLNSCVSKTAANKSPCE
TISSPSSTLESKDSGIIATITSSSENDDRSGSSLEWNKDGNLRLGVQKGVLHDRRADNCSPVAEEETTGS
AESTLPKAESSAGDGPVPYSQGSSSLIMPRPNSVAATSSTKLEDLSYLDGQRNAPLRTSIRLPWHNTAGG
RAQEVKARFAPYKPQDILLKPLLFEVPSITTDSVFVGRDWLFHQIEENLRNTELAENRGAVVVGNVGFGK
TAIISKLVALSCHGSRMRQIASNSPGSSPKTSDPTQDLHFTPLLSPSSSTSASSTAKTPLGSISAENQRP
REDAVKYLASKVVAYHYCQADNTYTCLVPEFVHSIAALLCRSHQLAAYRDLLIKEPQLQSMLSLRSCVQD
PVAAFKRGVLEPLTNLRNEQKIPEEEYIILIDGLNEAEFHKPDYGDTLSSFITKIISKFPAWLKLIVTVR
ANFQEIISALPFVKLSLDDFPDNKDIHSDLHAYVQHRVHSSQDILSNISLNGKADATLIGKVSSHLVLRS
LGSYLYLKLTLDLFQRGHLVIKSASYKVVPVSLSELYLLQCNMKFMTQSAFERALPILNVALASLHPMTD
EQIFQAINAGHIQGEQGWEDFQQRMDALSCFLIKRRDKTRMFCHPSFREWLVWRADGENTAFLCEPRNGH
ALLAFMFSRQEGKLNRQQTMELGHHILKAHIFKGLSKKTGISSSHLQALWIGYSTEGLSAALASLRNLYT
PNVKVSRLLILGGANVNYRTEVLNNAPILCVQSHLGHEEVVTLLLEFGACLDGTSENGMTALCYAAAAGH
MKLVCLLTKKGVRVDHLDKKGQCALVHSALRGHGDILQYLLTCEWSPGPPQPGTLRKSHALQQALTAAAS
MGHSSVVQCLLGMEKEHEVEVNGTDTLWGETALTAAAGRGKLEVCELLLGHGAAVSRTNRRGVPPLFCAA
RQGHWQIVRLLLERGCDVNLSDKQGRTPLMVAACEGHLSTVEFLLSKGAALSSLDKEGLSALSWACLKGH
RAVVQYLVEEGAAIDQTDKNGRTPLDLAAFYGDAETVLYLVEKGAVIEHVDHSGMRPLDRAIGCRNTSVV
VALLRKGAKLGNAAWAMATSKPDILIILLQKLMEEGNVMYKKGKMKEAAQRYQYALRKFPREGFGEDMRP
FNELRVSLYLNLSRCRRKTNDFGMAEEFASKALELKPKSYEAFYARARAKRNSRQFVAALADLQEAVKLC
PTNQEVKRLLARVEEECKQLQRSQQQKQQGPLPAPLNDSENEEDTPTPGLSDHFHSEETEEEETSPQEES
VSPTPRSQPSSSVPSSYIRNLQEGLQSKGRPVSPQSRAGIGKSLREPVAQPGLLLQPSKQAQIVKTSQHL
GSGQSAVRNGSMKVQISSQNPPPSPMPGRIAATPAGSRTQHLEGTGTFTTRAGCGHFGDRLGPSQNVRLQ
CGENGPAHPLPSKTKTTERLLSHSSVAVDAAPPNQGGLATCSDVRHPASLTSSGSSGSPSSSIKMSSSTS
SLTSSSSFSDGFKVQGPDTRIKDKVVTHVQSGTAEHRPRNTPFMGIMDKTARFQQQSNPPSRSWHCPAPE
GLLTNTSSAAGLQSANTEKPSLMQVGGYNNQAKTCSVSTLSASVHNGAQVKELEESKCQIPVHSQENRIT
KTVSHLYQESISKQQPHISNEAHRSHLTAAKPKRSFIESNV


Links Key
 Links to:   History report
  BLAST report
  Entrez Gene
  Nucleotide report
  Protein report
 Re-query CCDS DB by:   CCDS ID
  Gene ID
  Nucleotide ID
  Protein ID
 Genome Browser Links:   Ensembl Genome Browser
  NCBI Sequence Viewer
  UCSC Genome Browser
  VEGA Genome Browser

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