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Report for CCDS42534.1 (current version)

CCDS Status Species Chrom. Gene CCDS Release NCBI Annotation Release Ensembl Annotation Release Links
42534.1 Public Homo sapiens 19 ZNF682 24 110 108 CCDS HistoryNCBI Gene:91120Re-query CCDS DB by CCDS ID:42534.1Re-query CCDS DB by GeneID:91120See the combined annotation on chromosome 19 in Sequence Viewer

Public since: CCDS release 5, NCBI annotation release 36.3, Ensembl annotation release 47

Review status: Reviewed (by RefSeq and Havana)

Sequence IDs included in CCDS 42534.1

Original Current Source Nucleotide ID Protein ID MANE Status in CCDS Seq. Status Links
Original member Current member EBI ENST00000358523.9 ENSP00000351324.5 Accepted alive Link to Ensembl Transcript Viewer:ENST00000358523.9Link to Ensembl Protein Viewer:ENSP00000351324.5Re-query CCDS DB by Nucleotide ID:ENST00000358523Re-query CCDS DB by Protein ID:ENSP00000351324
Original member Current member EBI ENST00000397162.5 ENSP00000380348.1 Accepted alive Link to Ensembl Transcript Viewer:ENST00000397162.5Link to Ensembl Protein Viewer:ENSP00000380348.1Re-query CCDS DB by Nucleotide ID:ENST00000397162Re-query CCDS DB by Protein ID:ENSP00000380348
Original member Current member NCBI NM_001077349.1 NP_001070817.1 Accepted alive Link to Nucleotide Sequence:NM_001077349.1Link to Protein Sequence:NP_001070817.1Re-query CCDS DB by Nucleotide ID:NM_001077349Re-query CCDS DB by Protein ID:NP_001070817Link to BLAST:NP_001070817.1

RefSeq Length Related UniProtKB/SwissProt Length Identity Gaps Mismatches
NP_001070817.1 466 O95780-3 466 100% 0 0

Chromosomal Locations for CCDS 42534.1

Assembly GRCh38.p14 (GCF_000001405.40)

On '-' strand of Chromosome 19 (NC_000019.10)
Genome Browser links: Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 19Link to Ensembl Genome Browser on chromosome 19See the combined annotation on chromosome 19 in Sequence Viewer

Chromosome Start Stop Links
19 20006005 20007275 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 19Link to Ensembl Genome Browser on chromosome 19
19 20023004 20023099 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 19Link to Ensembl Genome Browser on chromosome 19
19 20024250 20024283 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 19Link to Ensembl Genome Browser on chromosome 19

CCDS Sequence Data
Blue highlighting indicates alternating exons.
Red highlighting indicates amino acids encoded across a splice junction.
 
Mouse over the nucleotide or protein sequence below and click on the highlighted codon or residue to select the pair.

Nucleotide Sequence (1401 nt):
ATGCTAGAGAACTACAGAAACCTGGTCTCTCTGGGTCTTACTGTTTCTAAGCCAGAACTGATTAGCCGTC
TGGAGCAAAGACAGGAGCCCTGGAATGTGAAGAGACATGAGACCATAGCCAAACCCCCAGCTATGTCTTC
TCATTACACTGAAGACCTTTTGCCAGAACAGTGCATGCAAGATTCATTCCAAAAAGTGATACTGAGAAGA
TATGGAAGCTGTGGACTTGAGGATTTACACTTAAGGAAGGATGGGGAAAATGTGGGTGAGTGTAAGGATC
AAAAAGAAATTTATAATGGACTTAACCAATGTTTGTCAACTCTACCTAGCAAAATTTTCCCATATAATAA
ATGTGTGAAAGTCTTTAGTAAATCATCAAATCTAAATAGAGAAAACATAAGACATACTACAGAGAAACTT
TTCAAATGTATGCAATGTGGCAAAGTCTTTAAATCTCACTCAGGCCTTTCTTATCATAAGATAATTCACA
CTGAAGAGAAACTCTGCATATGTGAGGAATGTGGCAAAACCTTTAAGTGGTTCTCATACCTTACTAAACA
TAAGAGAATTCACACTGGAGAGAAACCATACAAATGTGAAGAATGTGGCAAAGCTTTTAACTGGTGCTCG
AGTCTTACTAAACATAAGAGAATCCATACTGGTGAGAAACCCTACAAATGTGAAGAATGTGGAAAAGCCT
TTCACTGGTGTTCACCCTTTGTTAGACATAAGAAAATTCATACAGGAGAAAAACCCTATACATGTGAAGA
CTGTGGCAGAGCGTTTAACCGGCACTCACATCTCACCAAACATAAGACAATTCACACTGGAAAGAAACCC
TACAAATGTAAAGAATGTGGGAAAGCCTTTAACCACTGCTCACTACTTACTATACATGAGAGAACCCATA
CGGGAGAGAAACCCTATAAATGTGAAGAATGTGGCAAAGCTTTTAACTCATCATCAATTCTTACTGAACA
TAAGGTAATTCATAGCGGAGAGAAACCCTACAAATGTGAAAAATGTGACAAAGTCTTTAAGAGGTTCTCA
TACCTTACTAAACACAAGAGAATTCACACTGGAGAGAAACCCTACAAATGTGAAGAATGTGGCAAAGCTT
TTAACTGGTCCTCAATCCTTACTGAACATAAGAGAATTCATACTGGAGAGAAACCCTACAACTGTGAAGA
ATGTGGAAAAGCCTTTAATCGGTGCTCACACCTTACTAGACATAAGAAAATTCATACTGCCGTCAAACGC
TATAAATGTGAAGAATGTGGCAAAGCTTTTAAACGGTGCTCACATCTTAATGAACATAAGAGAGTTCAAA
GAGGAGAGAAATCCTGCAAGTATAAAAAATGTGGGGAAGCTTTTAATCACTGCTCAAACCTTACTACGTA
A

Translation (466 aa):
MLENYRNLVSLGLTVSKPELISRLEQRQEPWNVKRHETIAKPPAMSSHYTEDLLPEQCMQDSFQKVILRR
YGSCGLEDLHLRKDGENVGECKDQKEIYNGLNQCLSTLPSKIFPYNKCVKVFSKSSNLNRENIRHTTEKL
FKCMQCGKVFKSHSGLSYHKIIHTEEKLCICEECGKTFKWFSYLTKHKRIHTGEKPYKCEECGKAFNWCS
SLTKHKRIHTGEKPYKCEECGKAFHWCSPFVRHKKIHTGEKPYTCEDCGRAFNRHSHLTKHKTIHTGKKP
YKCKECGKAFNHCSLLTIHERTHTGEKPYKCEECGKAFNSSSILTEHKVIHSGEKPYKCEKCDKVFKRFS
YLTKHKRIHTGEKPYKCEECGKAFNWSSILTEHKRIHTGEKPYNCEECGKAFNRCSHLTRHKKIHTAVKR
YKCEECGKAFKRCSHLNEHKRVQRGEKSCKYKKCGEAFNHCSNLTT


Links Key
 Links to:   History report
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 Re-query CCDS DB by:   CCDS ID
  Gene ID
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 Genome Browser Links:   Ensembl Genome Browser
  NCBI Sequence Viewer
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