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Report for CCDS42533.1 (current version)

CCDS Status Species Chrom. Gene CCDS Release NCBI Annotation Release Ensembl Annotation Release Links
42533.1 Public Homo sapiens 19 ZNF682 24 110 108 CCDS HistoryNCBI Gene:91120Re-query CCDS DB by CCDS ID:42533.1Re-query CCDS DB by GeneID:91120See the combined annotation on chromosome 19 in Sequence Viewer

Public since: CCDS release 5, NCBI annotation release 36.3, Ensembl annotation release 47

Review status: Reviewed (by RefSeq and Havana)

Sequence IDs included in CCDS 42533.1

Original Current Source Nucleotide ID Protein ID MANE Status in CCDS Seq. Status Links
Original member Current member EBI ENST00000397165.7 ENSP00000380351.1 MANE Select Accepted alive Link to Ensembl Transcript Viewer:ENST00000397165.7Link to Ensembl Protein Viewer:ENSP00000380351.1Re-query CCDS DB by Nucleotide ID:ENST00000397165Re-query CCDS DB by Protein ID:ENSP00000380351
Original member Current member NCBI NM_033196.3 NP_149973.1 MANE Select Accepted alive Link to Nucleotide Sequence:NM_033196.3Link to Protein Sequence:NP_149973.1Re-query CCDS DB by Nucleotide ID:NM_033196Re-query CCDS DB by Protein ID:NP_149973Link to BLAST:NP_149973.1

RefSeq Length Related UniProtKB/SwissProt Length Identity Gaps Mismatches
NP_149973.1 498 O95780-1 498 100% 0 0

Chromosomal Locations for CCDS 42533.1

Assembly GRCh38.p14 (GCF_000001405.40)

On '-' strand of Chromosome 19 (NC_000019.10)
Genome Browser links: Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 19Link to Ensembl Genome Browser on chromosome 19See the combined annotation on chromosome 19 in Sequence Viewer

Chromosome Start Stop Links
19 20006005 20007275 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 19Link to Ensembl Genome Browser on chromosome 19
19 20023004 20023099 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 19Link to Ensembl Genome Browser on chromosome 19
19 20024250 20024376 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 19Link to Ensembl Genome Browser on chromosome 19
19 20039343 20039345 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 19Link to Ensembl Genome Browser on chromosome 19

CCDS Sequence Data
Blue highlighting indicates alternating exons.
Red highlighting indicates amino acids encoded across a splice junction.
 
Mouse over the nucleotide or protein sequence below and click on the highlighted codon or residue to select the pair.

Nucleotide Sequence (1497 nt):
ATGGAACTGTTGACATTCAGGGATGTGACCATAGAATTCTCTCTGGAGGAGTGGGAGTTTCTGAACCCTG
CTCAGCAGAGTTTGTATAGGAAAGTGATGCTAGAGAACTACAGAAACCTGGTCTCTCTGGGTCTTACTGT
TTCTAAGCCAGAACTGATTAGCCGTCTGGAGCAAAGACAGGAGCCCTGGAATGTGAAGAGACATGAGACC
ATAGCCAAACCCCCAGCTATGTCTTCTCATTACACTGAAGACCTTTTGCCAGAACAGTGCATGCAAGATT
CATTCCAAAAAGTGATACTGAGAAGATATGGAAGCTGTGGACTTGAGGATTTACACTTAAGGAAGGATGG
GGAAAATGTGGGTGAGTGTAAGGATCAAAAAGAAATTTATAATGGACTTAACCAATGTTTGTCAACTCTA
CCTAGCAAAATTTTCCCATATAATAAATGTGTGAAAGTCTTTAGTAAATCATCAAATCTAAATAGAGAAA
ACATAAGACATACTACAGAGAAACTTTTCAAATGTATGCAATGTGGCAAAGTCTTTAAATCTCACTCAGG
CCTTTCTTATCATAAGATAATTCACACTGAAGAGAAACTCTGCATATGTGAGGAATGTGGCAAAACCTTT
AAGTGGTTCTCATACCTTACTAAACATAAGAGAATTCACACTGGAGAGAAACCATACAAATGTGAAGAAT
GTGGCAAAGCTTTTAACTGGTGCTCGAGTCTTACTAAACATAAGAGAATCCATACTGGTGAGAAACCCTA
CAAATGTGAAGAATGTGGAAAAGCCTTTCACTGGTGTTCACCCTTTGTTAGACATAAGAAAATTCATACA
GGAGAAAAACCCTATACATGTGAAGACTGTGGCAGAGCGTTTAACCGGCACTCACATCTCACCAAACATA
AGACAATTCACACTGGAAAGAAACCCTACAAATGTAAAGAATGTGGGAAAGCCTTTAACCACTGCTCACT
ACTTACTATACATGAGAGAACCCATACGGGAGAGAAACCCTATAAATGTGAAGAATGTGGCAAAGCTTTT
AACTCATCATCAATTCTTACTGAACATAAGGTAATTCATAGCGGAGAGAAACCCTACAAATGTGAAAAAT
GTGACAAAGTCTTTAAGAGGTTCTCATACCTTACTAAACACAAGAGAATTCACACTGGAGAGAAACCCTA
CAAATGTGAAGAATGTGGCAAAGCTTTTAACTGGTCCTCAATCCTTACTGAACATAAGAGAATTCATACT
GGAGAGAAACCCTACAACTGTGAAGAATGTGGAAAAGCCTTTAATCGGTGCTCACACCTTACTAGACATA
AGAAAATTCATACTGCCGTCAAACGCTATAAATGTGAAGAATGTGGCAAAGCTTTTAAACGGTGCTCACA
TCTTAATGAACATAAGAGAGTTCAAAGAGGAGAGAAATCCTGCAAGTATAAAAAATGTGGGGAAGCTTTT
AATCACTGCTCAAACCTTACTACGTAA

Translation (498 aa):
MELLTFRDVTIEFSLEEWEFLNPAQQSLYRKVMLENYRNLVSLGLTVSKPELISRLEQRQEPWNVKRHET
IAKPPAMSSHYTEDLLPEQCMQDSFQKVILRRYGSCGLEDLHLRKDGENVGECKDQKEIYNGLNQCLSTL
PSKIFPYNKCVKVFSKSSNLNRENIRHTTEKLFKCMQCGKVFKSHSGLSYHKIIHTEEKLCICEECGKTF
KWFSYLTKHKRIHTGEKPYKCEECGKAFNWCSSLTKHKRIHTGEKPYKCEECGKAFHWCSPFVRHKKIHT
GEKPYTCEDCGRAFNRHSHLTKHKTIHTGKKPYKCKECGKAFNHCSLLTIHERTHTGEKPYKCEECGKAF
NSSSILTEHKVIHSGEKPYKCEKCDKVFKRFSYLTKHKRIHTGEKPYKCEECGKAFNWSSILTEHKRIHT
GEKPYNCEECGKAFNRCSHLTRHKKIHTAVKRYKCEECGKAFKRCSHLNEHKRVQRGEKSCKYKKCGEAF
NHCSNLTT


Links Key
 Links to:   History report
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 Re-query CCDS DB by:   CCDS ID
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 Genome Browser Links:   Ensembl Genome Browser
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