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Report for CCDS42247.1 (current version)

CCDS Status Species Chrom. Gene CCDS Release NCBI Annotation Release Ensembl Annotation Release Links
42247.1 Public Homo sapiens 17 KIAA0753 24 110 108 CCDS HistoryNCBI Gene:9851Re-query CCDS DB by CCDS ID:42247.1Re-query CCDS DB by GeneID:9851See the combined annotation on chromosome 17 in Sequence Viewer

Public since: CCDS release 5, NCBI annotation release 36.3, Ensembl annotation release 47

Review status: Reviewed (by RefSeq and Havana)

Sequence IDs included in CCDS 42247.1

Original Current Source Nucleotide ID Protein ID MANE Status in CCDS Seq. Status Links
Original member Current member EBI ENST00000361413.8 ENSP00000355250.3 MANE Select Accepted alive Link to Ensembl Transcript Viewer:ENST00000361413.8Link to Ensembl Protein Viewer:ENSP00000355250.3Re-query CCDS DB by Nucleotide ID:ENST00000361413Re-query CCDS DB by Protein ID:ENSP00000355250
Original member Current member NCBI NM_014804.3 NP_055619.2 MANE Select Accepted alive Link to Nucleotide Sequence:NM_014804.3Link to Protein Sequence:NP_055619.2Re-query CCDS DB by Nucleotide ID:NM_014804Re-query CCDS DB by Protein ID:NP_055619Link to BLAST:NP_055619.2

RefSeq Length Related UniProtKB/SwissProt Length Identity Gaps Mismatches
NP_055619.2 967 Q2KHM9-1 967 100% 0 0

Chromosomal Locations for CCDS 42247.1

Assembly GRCh38.p14 (GCF_000001405.40)

On '-' strand of Chromosome 17 (NC_000017.11)
Genome Browser links: Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 17Link to Ensembl Genome Browser on chromosome 17See the combined annotation on chromosome 17 in Sequence Viewer

Chromosome Start Stop Links
17 6579747 6579864 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 17Link to Ensembl Genome Browser on chromosome 17
17 6589779 6590003 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 17Link to Ensembl Genome Browser on chromosome 17
17 6590510 6590630 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 17Link to Ensembl Genome Browser on chromosome 17
17 6594972 6595053 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 17Link to Ensembl Genome Browser on chromosome 17
17 6596158 6596343 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 17Link to Ensembl Genome Browser on chromosome 17
17 6599237 6599320 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 17Link to Ensembl Genome Browser on chromosome 17
17 6600380 6600458 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 17Link to Ensembl Genome Browser on chromosome 17
17 6606873 6606962 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 17Link to Ensembl Genome Browser on chromosome 17
17 6607181 6607270 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 17Link to Ensembl Genome Browser on chromosome 17
17 6608348 6608464 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 17Link to Ensembl Genome Browser on chromosome 17
17 6609994 6610160 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 17Link to Ensembl Genome Browser on chromosome 17
17 6611919 6612148 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 17Link to Ensembl Genome Browser on chromosome 17
17 6620788 6620998 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 17Link to Ensembl Genome Browser on chromosome 17
17 6622882 6623097 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 17Link to Ensembl Genome Browser on chromosome 17
17 6623509 6623571 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 17Link to Ensembl Genome Browser on chromosome 17
17 6624755 6624861 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 17Link to Ensembl Genome Browser on chromosome 17
17 6628117 6628741 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 17Link to Ensembl Genome Browser on chromosome 17
17 6635011 6635103 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 17Link to Ensembl Genome Browser on chromosome 17

CCDS Sequence Data
Blue highlighting indicates alternating exons.
Red highlighting indicates amino acids encoded across a splice junction.
 
Mouse over the nucleotide or protein sequence below and click on the highlighted codon or residue to select the pair.

Nucleotide Sequence (2904 nt):
ATGGGACCAGGCCAGCCAGCTTCAACCTGTGTTCATCTAGCACCTAGGACCCAACTTGATGGGAGGAGCG
ACCCCAAAGTACTTCAGACCCAGAACCAGCTGCAGTTTAATAGGAATGTTCCTACACATTCAAGCAACTT
GGCGATCCGATATTCTTGCCCACATGCCATTAGAATTGAAAAACTGAAGCACTCATACAATGAATCATAC
CATTGTAAAGATGCAGATTGTAGAGTTGGTCCTGACCTGGGCAGTTCTGTTTCATTTTCCGTCATATCCC
AAGAGAGACTTAGCTATGCTGTCCACCTAGCCAGAAGAGATGTGAAACGAAGACAATTTGAAAAACATAT
AAAAGAACATCATCTCAGAAGTCAGCCTCAAAGCTCTCAGAAGTGTGGACATACTAAGTATAAAATACCC
GACCACAGGGTGGAAAGGAAGGAATCAAAGAGTCAAGCAGCCTGTCAGTGTAGCCACCAGCCATCCAAAG
TAGAAATCTCCAGCTCTGGTGCCAAAGTATACCTTTACTCATCTCATCCAGGCCAGTCAGATCTTACTGT
GCCAAATTCGCCACCCACCCATGATCCGGGACTTCAGCCTCATCCCAGGATAGGTGACCACAAAAACATA
AGTGAACAGAAAAGCCTGCTAGAAGTCCAGCGACTCCAGAAAGAACTGAGCAGTTGTATCCACAAAATTG
AAGAGGTAACTAAAAAAGATAGACTAGAAGAAGCTTTGGATCCAGATGAAGAACGTCGAATCCGTATCAG
GAGACAGGAGCAAGCTGCTCGCTCTGCCCGAATGCTCTACGTCCTCCAGCAGCAGGTAAAAGAAATCCAG
GAAGAATTGGATAAATTGAGTCCACATAAAATTAAACACACTAAGAAGTCATGGGCAATGTCTAAGCTGG
CGGCTGCCCATCGAGGAGCCATTCGGGCCTTACAGATGTTTGTCACTCAGTTTACTGACCGAGGGGAGCA
TCCACTTCCTGCTCGGTGTAAGGAACTGGGCAGCCTTATTCGCCAGCTTTCACTTTGTTCTGTCAAGCTG
GATGCAGACCCTTCTGTTCCTGATGTGGTTATAGATATTCTGCAACAAATTGAGGCTTTGGAATCTCTCC
TGGAAAAGAAACTGTCACCAAAAAAGGTGAAAAAATGTTTCAGTGAAATTCGGAGCAGATTTCCTATCGG
TAGCCAAAAGGCCTTGGAGAGATGGCCAAGTACATCACCAAAGGGTGAGAGGAGGCCCCTCACAGCAAAG
GACACATTCCCACAGGAAACAAGTCGACCTTCTGTAGCAAAGCAGCTTCTTGCCGATAAGTATCAGCCCG
ATACGGAGCTTCCGGAGACCCAGAGGTTGCAGAGTGAGCTTGATGTATTAGATGCGGATATAGTTCTGGA
AGAAGGACCATTTATTCTAGACCAAAGTGCAAGCTTCAAAGACGAGGTGTTAGCCGTGGCAAAAACAAAA
GCAGGGAAAAAGAAGCCTGTGACTGAGAATGTGCCGTTTAGGAAGAAAGATACTCTGGCGCCAGCAAGAC
AGCAAGGACTCCGCAAAGCTGAAAGAGGTAGACAAAGCCAACCTCACAGTAAAAGCAGAGTGCAGCAGAC
AACAGTTTCATCCAGATTAAAAATGAACCGGCAGCCTGTGAAAGACCGCAAGGCACCATGGATACCCCCA
AACCCCACATCCCCACCAGCGTCTCCTAAATGTGCTGCATGGCTAAAGGTGAAAACTAGCCCCAGAGATG
CCACAAAAGAGCCTCTCCAGCAAGAAGATCCTCAAGAGGAAAGTCACCTGACAGGTGCTGTTGAGCATGA
AGCAGCCAGGCTCGCTTGGCTTGATGCTGAAACTTCCAAAAGATTGAAGGAACTAGAAGAGTTAAAAGCC
AAGGAAATTGACAGCATGCAAAAACAGAGGCTTGATTGGCTTGATGCTGAAACTTCTAGAAGAACAAAGG
AACTGAATGAGCTCAAAGCTGAAGAAATGTATAGACTCCAACAATTGAGTGTTTCTGCCACCCACTTAGC
AGACAAGGTAGAGGAGGCAGTTCTGGATCGTTTGAAGCCTCTCTTGGTCAAGGCCCAGAGAGTCAATTCT
ACTACAGAAGCAAATATTCATTTGAAAGATGGCTCGTCAGTAAACACAGCGAAAGCCCAGCCTGCACAGG
AGGTTGCAGCTGTTGATTTTGAATCCAACAACATTCGTCAGCTTGATGATTTTTTGGAAGATTGTGCCAG
TGAGCTCTGGGCTGTGACTCATGCTAAGATCTTGGGGTCTGAAACCTTAGCCACCGTTGAGGACAGCAAG
GATAGCCCAGATCTGGAGATCATGATGCGCCGAATGGAAGAGATGGAAAAATACCAGGAGTCTGTTCGTC
AAAGATATAATAAAATCGCATATGCTGATCCTCGACTTTGGATGCAGGAAGAAAACAATGACCAAAAAAT
CTCAGCAATAAGTGAAAAGCCTCTATCTCCTCATCCAATCAGAATCACGAAGACAGTGGATCGCAAGGAT
CCAGCCGTGAACATCATGTTAGAAAGGCCCTGTAATGGCAATTCCCTGGATGAAAGTGTGGGAACAGAGG
AAGGATCAGAGAAAAGAGAGGCCCCTCTTCTCTCCCTAGCCGAAGATTCTCAACAGAAAGAAGGCCGAGC
TCCCCTCTTTGTCCCACCGGGTATGCAGCACAGCATCGGTGACTACTGTAGTCGTTTTGAGCAGTACCTT
CGGATCATATCTCATGAGGCTGTAGGCTCCTTCAACCCGTGGCTGATAGCTGAAAGCTTTTCAGAAGAGC
TGGTAGATGAAGCTCTGGGTGCTGTGGCTGCTGAACTTCAGGATATGTGCGAAGATTATGCAGAAGCTGT
GTTCACCTCAGAATTCTTAGAGGCTGCTACATAA

Translation (967 aa):
MGPGQPASTCVHLAPRTQLDGRSDPKVLQTQNQLQFNRNVPTHSSNLAIRYSCPHAIRIEKLKHSYNESY
HCKDADCRVGPDLGSSVSFSVISQERLSYAVHLARRDVKRRQFEKHIKEHHLRSQPQSSQKCGHTKYKIP
DHRVERKESKSQAACQCSHQPSKVEISSSGAKVYLYSSHPGQSDLTVPNSPPTHDPGLQPHPRIGDHKNI
SEQKSLLEVQRLQKELSSCIHKIEEVTKKDRLEEALDPDEERRIRIRRQEQAARSARMLYVLQQQVKEIQ
EELDKLSPHKIKHTKKSWAMSKLAAAHRGAIRALQMFVTQFTDRGEHPLPARCKELGSLIRQLSLCSVKL
DADPSVPDVVIDILQQIEALESLLEKKLSPKKVKKCFSEIRSRFPIGSQKALERWPSTSPKGERRPLTAK
DTFPQETSRPSVAKQLLADKYQPDTELPETQRLQSELDVLDADIVLEEGPFILDQSASFKDEVLAVAKTK
AGKKKPVTENVPFRKKDTLAPARQQGLRKAERGRQSQPHSKSRVQQTTVSSRLKMNRQPVKDRKAPWIPP
NPTSPPASPKCAAWLKVKTSPRDATKEPLQQEDPQEESHLTGAVEHEAARLAWLDAETSKRLKELEELKA
KEIDSMQKQRLDWLDAETSRRTKELNELKAEEMYRLQQLSVSATHLADKVEEAVLDRLKPLLVKAQRVNS
TTEANIHLKDGSSVNTAKAQPAQEVAAVDFESNNIRQLDDFLEDCASELWAVTHAKILGSETLATVEDSK
DSPDLEIMMRRMEEMEKYQESVRQRYNKIAYADPRLWMQEENNDQKISAISEKPLSPHPIRITKTVDRKD
PAVNIMLERPCNGNSLDESVGTEEGSEKREAPLLSLAEDSQQKEGRAPLFVPPGMQHSIGDYCSRFEQYL
RIISHEAVGSFNPWLIAESFSEELVDEALGAVAAELQDMCEDYAEAVFTSEFLEAAT


Links Key
 Links to:   History report
  BLAST report
  Entrez Gene
  Nucleotide report
  Protein report
 Re-query CCDS DB by:   CCDS ID
  Gene ID
  Nucleotide ID
  Protein ID
 Genome Browser Links:   Ensembl Genome Browser
  NCBI Sequence Viewer
  UCSC Genome Browser
  VEGA Genome Browser

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