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Report for CCDS42110.1 (current version)

CCDS Status Species Chrom. Gene CCDS Release NCBI Annotation Release Ensembl Annotation Release Links
42110.1 Public Homo sapiens 16 PRSS33 24 110 108 CCDS HistoryNCBI Gene:260429Re-query CCDS DB by CCDS ID:42110.1Re-query CCDS DB by GeneID:260429See the combined annotation on chromosome 16 in Sequence Viewer

Public since: CCDS release 5, NCBI annotation release 36.3, Ensembl annotation release 47

Review status: Reviewed (by RefSeq and Havana)


Attributes
CDS uses downstream AUG

Sequence IDs included in CCDS 42110.1

Original Current Source Nucleotide ID Protein ID MANE Status in CCDS Seq. Status Links
Original member Current member EBI ENST00000293851.9 ENSP00000293851.5 Accepted alive Link to Ensembl Transcript Viewer:ENST00000293851.9Link to Ensembl Protein Viewer:ENSP00000293851.5Re-query CCDS DB by Nucleotide ID:ENST00000293851Re-query CCDS DB by Protein ID:ENSP00000293851
Original member Current member EBI ENST00000570702.5 ENSP00000458369.1 Accepted alive Link to Ensembl Transcript Viewer:ENST00000570702.5Link to Ensembl Protein Viewer:ENSP00000458369.1Re-query CCDS DB by Nucleotide ID:ENST00000570702Re-query CCDS DB by Protein ID:ENSP00000458369
Original member Current member EBI ENST00000682474.1 ENSP00000507560.1 MANE Select Accepted alive Link to Ensembl Transcript Viewer:ENST00000682474.1Link to Ensembl Protein Viewer:ENSP00000507560.1Re-query CCDS DB by Nucleotide ID:ENST00000682474Re-query CCDS DB by Protein ID:ENSP00000507560
Original member Current member NCBI NM_001385462.1 NP_001372391.1 Accepted alive Link to Nucleotide Sequence:NM_001385462.1Link to Protein Sequence:NP_001372391.1Re-query CCDS DB by Nucleotide ID:NM_001385462Re-query CCDS DB by Protein ID:NP_001372391Link to BLAST:NP_001372391.1
Original member Current member NCBI NM_001385463.1 NP_001372392.1 Accepted alive Link to Nucleotide Sequence:NM_001385463.1Link to Protein Sequence:NP_001372392.1Re-query CCDS DB by Nucleotide ID:NM_001385463Re-query CCDS DB by Protein ID:NP_001372392Link to BLAST:NP_001372392.1
Original member Current member NCBI NM_001385464.1 NP_001372393.1 Accepted alive Link to Nucleotide Sequence:NM_001385464.1Link to Protein Sequence:NP_001372393.1Re-query CCDS DB by Nucleotide ID:NM_001385464Re-query CCDS DB by Protein ID:NP_001372393Link to BLAST:NP_001372393.1
Original member Current member NCBI NM_152891.3 NP_690851.2 MANE Select Accepted alive Link to Nucleotide Sequence:NM_152891.3Link to Protein Sequence:NP_690851.2Re-query CCDS DB by Nucleotide ID:NM_152891Re-query CCDS DB by Protein ID:NP_690851Link to BLAST:NP_690851.2

RefSeq Length Related UniProtKB/SwissProt Length Identity Gaps Mismatches
NP_001372391.1 280 Q8NF86 280 100% 0 0
NP_001372392.1 280 Q8NF86 280 100% 0 0
NP_001372393.1 280 Q8NF86 280 100% 0 0
NP_690851.2 280 Q8NF86 280 100% 0 0

Chromosomal Locations for CCDS 42110.1

Assembly GRCh38.p14 (GCF_000001405.40)

On '-' strand of Chromosome 16 (NC_000016.10)
Genome Browser links: Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 16Link to Ensembl Genome Browser on chromosome 16See the combined annotation on chromosome 16 in Sequence Viewer

Chromosome Start Stop Links
16 2784644 2784802 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 16Link to Ensembl Genome Browser on chromosome 16
16 2785002 2785171 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 16Link to Ensembl Genome Browser on chromosome 16
16 2785375 2785646 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 16Link to Ensembl Genome Browser on chromosome 16
16 2785799 2785961 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 16Link to Ensembl Genome Browser on chromosome 16
16 2786089 2786121 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 16Link to Ensembl Genome Browser on chromosome 16
16 2786502 2786547 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 16Link to Ensembl Genome Browser on chromosome 16

CCDS Sequence Data
Blue highlighting indicates alternating exons.
Red highlighting indicates amino acids encoded across a splice junction.
 
Mouse over the nucleotide or protein sequence below and click on the highlighted codon or residue to select the pair.

Nucleotide Sequence (843 nt):
ATGAGAGGGGTTTCCTGTCTCCAGGTCCTGCTCCTTCTGGTGCTGGGAGCTGCTGGGACTCAGGGAAGGA
AGTCTGCAGCCTGCGGGCAGCCCCGCATGTCCAGTCGGATCGTTGGGGGCCGGGATGGCCGGGACGGAGA
GTGGCCGTGGCAGGCGAGCATCCAGCATCGTGGGGCACACGTGTGCGGGGGGTCGCTCATCGCCCCCCAG
TGGGTGCTGACAGCGGCGCACTGCTTCCCCAGGAGGGCACTGCCAGCTGAGTACCGCGTGCGCCTGGGGG
CGCTGCGTCTGGGCTCCACCTCGCCCCGCACGCTCTCGGTGCCCGTGCGACGGGTGCTGCTGCCCCCGGA
CTACTCCGAGGACGGGGCCCGCGGCGACCTGGCACTGCTGCAGCTGCGTCGCCCGGTGCCCCTGAGCGCT
CGCGTCCAACCCGTCTGCCTGCCCGTGCCCGGCGCCCGCCCGCCGCCCGGCACACCATGCCGGGTCACCG
GCTGGGGCAGCCTCCGCCCAGGAGTGCCCCTCCCAGAGTGGCGACCGCTACAAGGAGTAAGGGTGCCGCT
GCTGGACTCGCGCACCTGCGACGGCCTCTACCACGTGGGCGCGGACGTGCCCCAGGCTGAGCGCATTGTG
CTGCCTGGGAGTCTGTGTGCCGGCTACCCCCAGGGCCACAAGGACGCCTGCCAGGGTGATTCTGGGGGAC
CTCTGACCTGCCTGCAGTCTGGGAGCTGGGTCCTGGTGGGCGTGGTGAGCTGGGGCAAGGGTTGTGCCCT
GCCCAACCGTCCAGGGGTCTACACCAGTGTGGCCACATATAGCCCCTGGATTCAGGCTCGCGTCAGCTTC
TAA

Translation (280 aa):
MRGVSCLQVLLLLVLGAAGTQGRKSAACGQPRMSSRIVGGRDGRDGEWPWQASIQHRGAHVCGGSLIAPQ
WVLTAAHCFPRRALPAEYRVRLGALRLGSTSPRTLSVPVRRVLLPPDYSEDGARGDLALLQLRRPVPLSA
RVQPVCLPVPGARPPPGTPCRVTGWGSLRPGVPLPEWRPLQGVRVPLLDSRTCDGLYHVGADVPQAERIV
LPGSLCAGYPQGHKDACQGDSGGPLTCLQSGSWVLVGVVSWGKGCALPNRPGVYTSVATYSPWIQARVSF


Links Key
 Links to:   History report
  BLAST report
  Entrez Gene
  Nucleotide report
  Protein report
 Re-query CCDS DB by:   CCDS ID
  Gene ID
  Nucleotide ID
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 Genome Browser Links:   Ensembl Genome Browser
  NCBI Sequence Viewer
  UCSC Genome Browser
  VEGA Genome Browser

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