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Report for CCDS41969.1 (current version)

CCDS Status Species Chrom. Gene CCDS Release NCBI Annotation Release Ensembl Annotation Release Links
41969.1 Public Homo sapiens 14 ZFYVE1 24 110 108 CCDS HistoryNCBI Gene:53349Re-query CCDS DB by CCDS ID:41969.1Re-query CCDS DB by GeneID:53349See the combined annotation on chromosome 14 in Sequence Viewer

Public since: CCDS release 5, NCBI annotation release 36.3, Ensembl annotation release 47

Review status: Reviewed (by RefSeq and Havana)

Sequence IDs included in CCDS 41969.1

Original Current Source Nucleotide ID Protein ID MANE Status in CCDS Seq. Status Links
Original member Current member EBI ENST00000394207.6 ENSP00000377757.2 Accepted alive Link to Ensembl Transcript Viewer:ENST00000394207.6Link to Ensembl Protein Viewer:ENSP00000377757.2Re-query CCDS DB by Nucleotide ID:ENST00000394207Re-query CCDS DB by Protein ID:ENSP00000377757
Original member Current member EBI ENST00000555072.1 ENSP00000452232.1 Accepted alive Link to Ensembl Transcript Viewer:ENST00000555072.1Link to Ensembl Protein Viewer:ENSP00000452232.1Re-query CCDS DB by Nucleotide ID:ENST00000555072Re-query CCDS DB by Protein ID:ENSP00000452232
Original member Current member NCBI NM_001281735.1 NP_001268664.1 Accepted alive Link to Nucleotide Sequence:NM_001281735.1Link to Protein Sequence:NP_001268664.1Re-query CCDS DB by Nucleotide ID:NM_001281735Re-query CCDS DB by Protein ID:NP_001268664Link to BLAST:NP_001268664.1
Original member Current member NCBI NM_178441.2 NP_848535.1 Accepted alive Link to Nucleotide Sequence:NM_178441.2Link to Protein Sequence:NP_848535.1Re-query CCDS DB by Nucleotide ID:NM_178441Re-query CCDS DB by Protein ID:NP_848535Link to BLAST:NP_848535.1

RefSeq Length Related UniProtKB/SwissProt Length Identity Gaps Mismatches
NP_001268664.1 362 Q9HBF4-2 362 100% 0 0
NP_848535.1 362 Q9HBF4-2 362 100% 0 0

Chromosomal Locations for CCDS 41969.1

Assembly GRCh38.p14 (GCF_000001405.40)

On '-' strand of Chromosome 14 (NC_000014.9)
Genome Browser links: Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 14Link to Ensembl Genome Browser on chromosome 14See the combined annotation on chromosome 14 in Sequence Viewer

Chromosome Start Stop Links
14 72970882 72971114 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 14Link to Ensembl Genome Browser on chromosome 14
14 72974080 72974193 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 14Link to Ensembl Genome Browser on chromosome 14
14 72974779 72974959 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 14Link to Ensembl Genome Browser on chromosome 14
14 72975551 72975721 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 14Link to Ensembl Genome Browser on chromosome 14
14 72977927 72978044 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 14Link to Ensembl Genome Browser on chromosome 14
14 72978137 72978234 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 14Link to Ensembl Genome Browser on chromosome 14
14 72978861 72978969 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 14Link to Ensembl Genome Browser on chromosome 14
14 72981789 72981853 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 14Link to Ensembl Genome Browser on chromosome 14

CCDS Sequence Data
Blue highlighting indicates alternating exons.
Red highlighting indicates amino acids encoded across a splice junction.
 
Mouse over the nucleotide or protein sequence below and click on the highlighted codon or residue to select the pair.

Nucleotide Sequence (1089 nt):
ATGGCGCACAGCTCCTTTTTTCCAGATGAGTATTTCACCTGCTCCTCCTTGTGCCTCAGCTGTGGGGTTG
GATGTAAGAAAAGCATGAATCATGGGAAGGAAGGAGTGCCTCATGAAGCCAAGAGCCGCTGCAGATACTC
CCACCAGTATGACAACCGAGTGTATACCTGCAAGGCCTGCTATGAGAGAGGCGAGGAAGTCAGTGTAGTG
CCCAAAACATCTGCTTCCACTGACTCCCCCTGGATGGGTCTCGCAAAATATGCCTGGTCTGGGTATGTGA
TCGAATGTCCTAACTGTGGCGTGGTCTATCGTAGTCGGCAGTACTGGTTTGGAAACCAAGATCCTGTGGA
TACGGTGGTGCGGACAGAGATTGTGCATGTGTGGCCTGGAACTGATGGGTTTCTGAAGGACAACAACAAT
GCTGCCCAGCGCCTGTTGGACGGGATGAACTTCATGGCTCAGTCGGTGTCCGAGCTTAGCCTTGGACCCA
CCAAGGCTGTGACTTCCTGGCTGACAGACCAGATCGCCCCTGCCTACTGGAGGCCCAACTCCCAGATTCT
GAGCTGCAACAAGTGTGCGACGTCCTTTAAAGATAACGACACTAAGCATCACTGCCGAGCCTGTGGGGAG
GGCTTCTGTGACAGCTGTTCATCAAAGACTCGGCCAGTGCCTGAGCGGGGCTGGGGCCCTGCGCCAGTGC
GGGTCTGTGACAACTGCTACGAAGCCAGGAACGTCCAGTTAGCTGTTACCGAGGCACAAGTGGACGATGA
AGGTGGAACGCTCATTGCTCGGAAGGTGGGCGAGGCCGTGCAGAACACTCTGGGAGCCGTGGTGACAGCC
ATTGACATACCACTAGGTCTGGTAAAGGACGCGGCCAGGCCTGCGTACTGGGTGCCTGACCACGAAATCC
TCCACTGCCACAACTGCCGGAAGGAGTTCAGCATCAAGCTCTCCAAGCACCACTGCCGGGCCTGCGGACA
GGGCTTCTGTGATGAGTGCTCCCATGACCGCCGGGCTGTTCCTTCTCGTGGCTGGGACCATCCCGTCCGA
GTCTGCTTCAACTGCAATAAAAAGCCCGGTGACCTTTAA

Translation (362 aa):
MAHSSFFPDEYFTCSSLCLSCGVGCKKSMNHGKEGVPHEAKSRCRYSHQYDNRVYTCKACYERGEEVSVV
PKTSASTDSPWMGLAKYAWSGYVIECPNCGVVYRSRQYWFGNQDPVDTVVRTEIVHVWPGTDGFLKDNNN
AAQRLLDGMNFMAQSVSELSLGPTKAVTSWLTDQIAPAYWRPNSQILSCNKCATSFKDNDTKHHCRACGE
GFCDSCSSKTRPVPERGWGPAPVRVCDNCYEARNVQLAVTEAQVDDEGGTLIARKVGEAVQNTLGAVVTA
IDIPLGLVKDAARPAYWVPDHEILHCHNCRKEFSIKLSKHHCRACGQGFCDECSHDRRAVPSRGWDHPVR
VCFNCNKKPGDL


Links Key
 Links to:   History report
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  Nucleotide report
  Protein report
 Re-query CCDS DB by:   CCDS ID
  Gene ID
  Nucleotide ID
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 Genome Browser Links:   Ensembl Genome Browser
  NCBI Sequence Viewer
  UCSC Genome Browser
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