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Report for CCDS41932.1 (current version)

CCDS Status Species Chrom. Gene CCDS Release NCBI Annotation Release Ensembl Annotation Release Links
41932.1 Public Homo sapiens 14 REC8 24 110 108 CCDS HistoryNCBI Gene:9985Re-query CCDS DB by CCDS ID:41932.1Re-query CCDS DB by GeneID:9985See the combined annotation on chromosome 14 in Sequence Viewer

Public since: CCDS release 5, NCBI annotation release 36.3, Ensembl annotation release 47

Review status: Reviewed (by RefSeq and Havana)

Sequence IDs included in CCDS 41932.1

Original Current Source Nucleotide ID Protein ID MANE Status in CCDS Seq. Status Links
Original member Current member EBI ENST00000611366.5 ENSP00000482439.1 MANE Select Accepted alive Link to Ensembl Transcript Viewer:ENST00000611366.5Link to Ensembl Protein Viewer:ENSP00000482439.1Re-query CCDS DB by Nucleotide ID:ENST00000611366Re-query CCDS DB by Protein ID:ENSP00000482439
Original member Current member EBI ENST00000620473.4 ENSP00000482546.1 Accepted alive Link to Ensembl Transcript Viewer:ENST00000620473.4Link to Ensembl Protein Viewer:ENSP00000482546.1Re-query CCDS DB by Nucleotide ID:ENST00000620473Re-query CCDS DB by Protein ID:ENSP00000482546
Original member Current member NCBI NM_001048205.2 NP_001041670.1 MANE Select Accepted alive Link to Nucleotide Sequence:NM_001048205.2Link to Protein Sequence:NP_001041670.1Re-query CCDS DB by Nucleotide ID:NM_001048205Re-query CCDS DB by Protein ID:NP_001041670Link to BLAST:NP_001041670.1
Original member Current member NCBI NM_005132.3 NP_005123.2 Accepted alive Link to Nucleotide Sequence:NM_005132.3Link to Protein Sequence:NP_005123.2Re-query CCDS DB by Nucleotide ID:NM_005132Re-query CCDS DB by Protein ID:NP_005123Link to BLAST:NP_005123.2

RefSeq Length Related UniProtKB/SwissProt Length Identity Gaps Mismatches
NP_001041670.1 547 O95072-1 547 100% 0 0
NP_005123.2 547 O95072-1 547 100% 0 0

Chromosomal Locations for CCDS 41932.1

Assembly GRCh38.p14 (GCF_000001405.40)

On '+' strand of Chromosome 14 (NC_000014.9)
Genome Browser links: Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 14Link to Ensembl Genome Browser on chromosome 14See the combined annotation on chromosome 14 in Sequence Viewer

Chromosome Start Stop Links
14 24172553 24172608 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 14Link to Ensembl Genome Browser on chromosome 14
14 24172713 24172781 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 14Link to Ensembl Genome Browser on chromosome 14
14 24172899 24173041 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 14Link to Ensembl Genome Browser on chromosome 14
14 24173126 24173198 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 14Link to Ensembl Genome Browser on chromosome 14
14 24173291 24173411 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 14Link to Ensembl Genome Browser on chromosome 14
14 24175543 24175624 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 14Link to Ensembl Genome Browser on chromosome 14
14 24176822 24176901 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 14Link to Ensembl Genome Browser on chromosome 14
14 24177141 24177222 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 14Link to Ensembl Genome Browser on chromosome 14
14 24177353 24177383 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 14Link to Ensembl Genome Browser on chromosome 14
14 24177465 24177541 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 14Link to Ensembl Genome Browser on chromosome 14
14 24177709 24177758 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 14Link to Ensembl Genome Browser on chromosome 14
14 24178091 24178222 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 14Link to Ensembl Genome Browser on chromosome 14
14 24178606 24178672 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 14Link to Ensembl Genome Browser on chromosome 14
14 24178777 24178916 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 14Link to Ensembl Genome Browser on chromosome 14
14 24179085 24179133 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 14Link to Ensembl Genome Browser on chromosome 14
14 24179397 24179463 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 14Link to Ensembl Genome Browser on chromosome 14
14 24179595 24179726 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 14Link to Ensembl Genome Browser on chromosome 14
14 24179800 24179906 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 14Link to Ensembl Genome Browser on chromosome 14
14 24180010 24180095 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 14Link to Ensembl Genome Browser on chromosome 14

CCDS Sequence Data
Blue highlighting indicates alternating exons.
Red highlighting indicates amino acids encoded across a splice junction.
 
Mouse over the nucleotide or protein sequence below and click on the highlighted codon or residue to select the pair.

Nucleotide Sequence (1644 nt):
ATGTTCTACTATCCCAACGTGCTTCAGCGCCACACCGGCTGCTTTGCCACCATCTGGCTGGCGGCGACTC
GCGGCAGCCGGTTGGTGAAGCGCGAATACCTGAGGGTGAATGTGGTGAAAACCTGCGAGGAAATCCTCAA
TTACGTGCTGGTACGAGTGCAACCCCCGCAGCCCGGCCTGCCGCGGCCCCGCTTCTCCCTCTATCTCTCA
GCCCAACTTCAGATCGGTGTGATCCGCGTCTATTCTCAACAATGCCAGTACCTCGTGGAGGACATCCAGC
ACATCTTGGAGCGCCTCCACCGTGCCCAGCTGCAGATCCGAATAGATATGGAGACTGAGCTACCCAGCCT
GCTGCTTCCTAACCACCTGGCCATGATGGAGACCCTAGAAGATGCTCCAGATCCCTTTTTTGGGATGATG
TCTGTGGATCCCAGACTTCCTAGTCCTTTCGATATCCCTCAGATTCGACACCTCTTAGAGGCTGCAATCC
CAGAGAGAGTTGAAGAGATCCCTCCTGAAGTTCCTACAGAGCCCAGGGAGCCAGAGAGGATTCCGGTCAC
TGTGCTGCCACCTGAGGCCATCACGATCCTGGAGGCAGAGCCCATACGGATGCTGGAGATTGAGGGTGAA
CGGGAGCTCCCAGAGGTCAGCCGCCGAGAACTGGACCTGCTGATCGCAGAGGAAGAAGAAGCTATCTTGT
TAGAAATCCCGCGGCTCCCACCTCCAGCTCCTGCAGAGGTGGAAGGAATAGGAGAGGCACTGGGTCCTGA
GGAGCTGAGGCTGACAGGCTGGGAACCTGGGGCCCTACTCATGGAGGTGACCCCCCCGGAGGAGCTGCGT
CTGCCAGCCCCACCCAGCCCAGAGAGGAGGCCCCCAGTCCCCCCACCTCCTCGCCGCCGCCGTCGTCGCC
GGTTACTGTTCTGGGACAAGGAGACTCAGATCTCCCCGGAGAAATTCCAGGAACAACTGCAAACCAGAGC
CCACTGCTGGGAATGTCCTATGGTGCAGCCGCCCGAGAGGACCATCAGAGGCCCTGCGGAGTTGTTCAGA
ACCCCAACTCTCTCTGGCTGGCTACCCCCTGAACTACTGGGTCTCTGGACCCATTGTGCCCAGCCACCCC
CAAAAGCCCTCAGGCGAGAGCTGCCTGAGGAGGCAGCCGCTGAGGAGGAAAGGAGAAAGATTGAAGTTCC
AAGTGAGATTGAGGTCCCGAGGGAGGCCCTGGAGCCCAGTGTTCCCCTTATGGTGTCTTTAGAGATCTCC
CTAGAGGCAGCTGAAGAGGAGAAGTCCCGCATCAGCCTCATCCCACCAGAAGAACGGTGGGCCTGGCCTG
AGGTGGAGGCGCCAGAAGCTCCTGCATTGCCCGTGGTGCCTGAACTCCCTGAGGTGCCCATGGAGATGCC
TTTGGTGCTGCCCCCAGAGCTCGAGCTGCTCTCACTGGAAGCAGTGCACAGGGCAGTGGCACTGGAGCTG
CAGGCTAACAGGGAGCCCGACTTCAGCAGCCTGGTGTCACCTCTCAGCCCCCGCAGGATGGCTGCCCGGG
TCTTCTACCTGCTCCTGGTGCTCTCAGCGCAACAGATTCTTCACGTGAAACAAGAAAAGCCATATGGTCG
CCTCCTGATCCAGCCGGGGCCCAGATTCCACTGA

Translation (547 aa):
MFYYPNVLQRHTGCFATIWLAATRGSRLVKREYLRVNVVKTCEEILNYVLVRVQPPQPGLPRPRFSLYLS
AQLQIGVIRVYSQQCQYLVEDIQHILERLHRAQLQIRIDMETELPSLLLPNHLAMMETLEDAPDPFFGMM
SVDPRLPSPFDIPQIRHLLEAAIPERVEEIPPEVPTEPREPERIPVTVLPPEAITILEAEPIRMLEIEGE
RELPEVSRRELDLLIAEEEEAILLEIPRLPPPAPAEVEGIGEALGPEELRLTGWEPGALLMEVTPPEELR
LPAPPSPERRPPVPPPPRRRRRRRLLFWDKETQISPEKFQEQLQTRAHCWECPMVQPPERTIRGPAELFR
TPTLSGWLPPELLGLWTHCAQPPPKALRRELPEEAAAEEERRKIEVPSEIEVPREALEPSVPLMVSLEIS
LEAAEEEKSRISLIPPEERWAWPEVEAPEAPALPVVPELPEVPMEMPLVLPPELELLSLEAVHRAVALEL
QANREPDFSSLVSPLSPRRMAARVFYLLLVLSAQQILHVKQEKPYGRLLIQPGPRFH


Links Key
 Links to:   History report
  BLAST report
  Entrez Gene
  Nucleotide report
  Protein report
 Re-query CCDS DB by:   CCDS ID
  Gene ID
  Nucleotide ID
  Protein ID
 Genome Browser Links:   Ensembl Genome Browser
  NCBI Sequence Viewer
  UCSC Genome Browser
  VEGA Genome Browser

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