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Report for CCDS41763.1 (current version)

CCDS Status Species Chrom. Gene CCDS Release NCBI Annotation Release Ensembl Annotation Release Links
41763.1 Public Homo sapiens 12 DNAI7 24 110 108 CCDS HistoryNCBI Gene:55259Re-query CCDS DB by CCDS ID:41763.1Re-query CCDS DB by GeneID:55259See the combined annotation on chromosome 12 in Sequence Viewer

Public since: CCDS release 5, NCBI annotation release 36.3, Ensembl annotation release 47

Review status: Reviewed (by RefSeq and Havana)

Sequence IDs included in CCDS 41763.1

Original Current Source Nucleotide ID Protein ID MANE Status in CCDS Seq. Status Links
Original member Current member EBI ENST00000354189.9 ENSP00000346126.5 Accepted alive Link to Ensembl Transcript Viewer:ENST00000354189.9Link to Ensembl Protein Viewer:ENSP00000346126.5Re-query CCDS DB by Nucleotide ID:ENST00000354189Re-query CCDS DB by Protein ID:ENSP00000346126
Original member Current member NCBI NM_001082972.3 NP_001076441.1 Accepted alive Link to Nucleotide Sequence:NM_001082972.3Link to Protein Sequence:NP_001076441.1Re-query CCDS DB by Nucleotide ID:NM_001082972Re-query CCDS DB by Protein ID:NP_001076441Link to BLAST:NP_001076441.1

RefSeq Length Related UniProtKB/SwissProt Length Identity Gaps Mismatches
NP_001076441.1 690 Q6TDU7-3 690 100% 0 0

Chromosomal Locations for CCDS 41763.1

Assembly GRCh38.p14 (GCF_000001405.40)

On '-' strand of Chromosome 12 (NC_000012.12)
Genome Browser links: Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 12Link to Ensembl Genome Browser on chromosome 12See the combined annotation on chromosome 12 in Sequence Viewer

Chromosome Start Stop Links
12 25108756 25108761 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 12Link to Ensembl Genome Browser on chromosome 12
12 25110127 25110240 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 12Link to Ensembl Genome Browser on chromosome 12
12 25111772 25111939 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 12Link to Ensembl Genome Browser on chromosome 12
12 25114656 25114870 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 12Link to Ensembl Genome Browser on chromosome 12
12 25119145 25119301 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 12Link to Ensembl Genome Browser on chromosome 12
12 25121753 25121913 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 12Link to Ensembl Genome Browser on chromosome 12
12 25123211 25123286 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 12Link to Ensembl Genome Browser on chromosome 12
12 25144365 25144677 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 12Link to Ensembl Genome Browser on chromosome 12
12 25147001 25147104 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 12Link to Ensembl Genome Browser on chromosome 12
12 25149628 25149774 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 12Link to Ensembl Genome Browser on chromosome 12
12 25154319 25154456 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 12Link to Ensembl Genome Browser on chromosome 12
12 25155311 25155412 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 12Link to Ensembl Genome Browser on chromosome 12
12 25158472 25158563 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 12Link to Ensembl Genome Browser on chromosome 12
12 25161113 25161197 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 12Link to Ensembl Genome Browser on chromosome 12
12 25190614 25190631 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 12Link to Ensembl Genome Browser on chromosome 12
12 25194886 25195062 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 12Link to Ensembl Genome Browser on chromosome 12

CCDS Sequence Data
Blue highlighting indicates alternating exons.
Red highlighting indicates amino acids encoded across a splice junction.
 
Mouse over the nucleotide or protein sequence below and click on the highlighted codon or residue to select the pair.

Nucleotide Sequence (2073 nt):
ATGAGGCAGACAGGTGGAGGGGCGACCACTGATTCTGCTTCACCAGTGTTAAATAATGTAATCAAGAGCC
AGTCATATTTTACAGCGAAGCGGGTCGGTTTGGGAAATAACTCATACCTTGGGGTGGGTCGGCCCTCTTC
TCAGCAATGGCTTTCCTTACCTGGACCAGGCGGACAGGGTCCCAAAGCAAAAAAGTCTGGCAGTAAGAAA
AAGAAAGTCACCAAAGCTGAACGATTGAAGCTGCTACAAGAGGAGGAGGAGAGACGACTGAAAGAGGAAG
AGGAAGCCCGTTTGAAATATGAGAAAGAAGAAATGGAAAGGCTTGAAATACAGCGAATTGAGAAAGAAAA
ATGGCATCGACTTGAAGCAAAAGATCTAGAAAGGAGAAATGAAGAACTTGAAGAACTTTATTTATTAGAG
AGGTGTTTTCCTGAAGCAGAGAAATTGAAACAGGAAACTAAATTGCTTTCTCAGTGGAAGCACTACATTC
AATGTGATGGGAGTCCTGATCCTTCAGTAGCCCAAGAAATGAACACGTTTATTAGTTTGTGGAAAGAGAA
AACAAATGAGACTTTTGAGGAAGTGATTGAGAAGAGTAAAGTAGTGCTAAATTTAATTGAGAAATTGAAA
TTTATTTTACTGGAAACTCCACCATGTGATTTGCAAGATAAAAATATAATACAGTACCAAGAATCAATAC
TACAACTGCAGGAGCTCCTTCATCTTAAATTCGGTGTAGCCACAGAAATACTTCTCAAACAAGCTAGTAC
TTTGGCAGATCTGGACAGTGGAAATATGGAAAAAGTCATTAAAGATGAAAATGTTACTCTGTATGTGTGG
GCAAACCTCAAGAAGAATCCAAGGCACAGAAGTGTTAGATTCTCTGAAACACAAATTGGATTTGAGATTC
CAAGGATATTAGCAACAAGTGACATTGCTGTACGACTCCTGCATACCCACTATGATCATGTTTCTGCACT
GCACCCTGTTTCAACACCATCAAAAGAATACACTTCTGCAGTAACTGAGCTTGTCAAAGATGATGTTAAG
AATGTAGAAAAAGCAATCAGCAAGGAGGTCGAAGAAGAGTCCAAACAACAAGAAAGAGGGTCTCACTTAA
TTCAGGAGGAAGAAATAAAAGTTGAGGAGGAACAAGGTGATATTGAAGTGAAAATGAGTTCTGCTGAGGA
AGAATCTGAAGCCATAAAATGTGAACGAGAGATGAAAGTATTAAGTGAAACTGTTTCAGCAGCACAGTTG
TTGCTGGTAGAGAATTCTTCTGAAAAGCCAGATTTCTTTGAAGACAATGTGGTGGATTTATGCCAGTTCA
CAACTCTGGGTGGAGTATACCACTTGGATATTTTGGAGCTTCCTCCACAGTGTAAACCAGTGAAGGGATG
GATGATTGTGGAAATACTCAAAGAAGGATTACAGAAATACACATATCCTCCGGAAACTACAGAAGAGTTT
GAGACAGAAAATGCTTTCCCACCTATAGAGGTCACACTTGAGGTTCATGAGAATGTAATCTTTTTTGAGG
ATCCTGTGGTTGTAAGGTGGGATGCTGAAGGTAAACATTGGAGAACTGATGGCATCAGCAATGTATCCTA
CAAACCAAAAGAAAGACTTGTAACATTCAGCCTGGACACCTTTGGCCCTGTTACCTTGATTCAAGATGCT
CATATTAACATGCCGTACCAGTCATGGGAACTAAGACCACTTGATGTAAATAAAGTACTTTTAACTGTGA
CTACAGTATTTACTGAGATTCAAATACAAATTAAGGAAAACCTCTGCATGTTATCTTCAATCAAACTAAA
AGACAAGAAACACATCTCTATTTTGGAAGGAACCTGGATGACTCCTATTCCTTTCATTATTGCTTTGAAA
GAAGCTGGACTGAATATCTTTCCTACTAGACACTCTCATTTTTATGTTATTATAAACAATAAGGTTCCTT
TGGTAGAAGTGAAAGCTTATCGACAGATGGCCCTACTAAGTTCTGCTTTTGCATTTGGTTGGAGCAAGTG
GAACCTACTATGTAATTCTACAAAAGTCGTATTTAAGTGGTGA

Translation (690 aa):
MRQTGGGATTDSASPVLNNVIKSQSYFTAKRVGLGNNSYLGVGRPSSQQWLSLPGPGGQGPKAKKSGSKK
KKVTKAERLKLLQEEEERRLKEEEEARLKYEKEEMERLEIQRIEKEKWHRLEAKDLERRNEELEELYLLE
RCFPEAEKLKQETKLLSQWKHYIQCDGSPDPSVAQEMNTFISLWKEKTNETFEEVIEKSKVVLNLIEKLK
FILLETPPCDLQDKNIIQYQESILQLQELLHLKFGVATEILLKQASTLADLDSGNMEKVIKDENVTLYVW
ANLKKNPRHRSVRFSETQIGFEIPRILATSDIAVRLLHTHYDHVSALHPVSTPSKEYTSAVTELVKDDVK
NVEKAISKEVEEESKQQERGSHLIQEEEIKVEEEQGDIEVKMSSAEEESEAIKCEREMKVLSETVSAAQL
LLVENSSEKPDFFEDNVVDLCQFTTLGGVYHLDILELPPQCKPVKGWMIVEILKEGLQKYTYPPETTEEF
ETENAFPPIEVTLEVHENVIFFEDPVVVRWDAEGKHWRTDGISNVSYKPKERLVTFSLDTFGPVTLIQDA
HINMPYQSWELRPLDVNKVLLTVTTVFTEIQIQIKENLCMLSSIKLKDKKHISILEGTWMTPIPFIIALK
EAGLNIFPTRHSHFYVIINNKVPLVEVKAYRQMALLSSAFAFGWSKWNLLCNSTKVVFKW


Links Key
 Links to:   History report
  BLAST report
  Entrez Gene
  Nucleotide report
  Protein report
 Re-query CCDS DB by:   CCDS ID
  Gene ID
  Nucleotide ID
  Protein ID
 Genome Browser Links:   Ensembl Genome Browser
  NCBI Sequence Viewer
  UCSC Genome Browser
  VEGA Genome Browser

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