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Report for CCDS41762.1 (current version)

CCDS Status Species Chrom. Gene CCDS Release NCBI Annotation Release Ensembl Annotation Release Links
41762.1 Public Homo sapiens 12 DNAI7 24 110 108 CCDS HistoryNCBI Gene:55259Re-query CCDS DB by CCDS ID:41762.1Re-query CCDS DB by GeneID:55259See the combined annotation on chromosome 12 in Sequence Viewer

Public since: CCDS release 5, NCBI annotation release 36.3, Ensembl annotation release 47

Review status: Reviewed (by RefSeq and Havana)

Sequence IDs included in CCDS 41762.1

Original Current Source Nucleotide ID Protein ID MANE Status in CCDS Seq. Status Links
Original member Current member EBI ENST00000320267.13 ENSP00000313141.9 Accepted alive Link to Ensembl Transcript Viewer:ENST00000320267.13Link to Ensembl Protein Viewer:ENSP00000313141.9Re-query CCDS DB by Nucleotide ID:ENST00000320267Re-query CCDS DB by Protein ID:ENSP00000313141
Original member Current member NCBI NM_001082973.3 NP_001076442.2 Accepted alive Link to Nucleotide Sequence:NM_001082973.3Link to Protein Sequence:NP_001076442.2Re-query CCDS DB by Nucleotide ID:NM_001082973Re-query CCDS DB by Protein ID:NP_001076442Link to BLAST:NP_001076442.2

RefSeq Length Related UniProtKB/SwissProt Length Identity Gaps Mismatches
NP_001076442.2 716 Q6TDU7-1 716 100% 0 0

Chromosomal Locations for CCDS 41762.1

Assembly GRCh38.p14 (GCF_000001405.40)

On '-' strand of Chromosome 12 (NC_000012.12)
Genome Browser links: Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 12Link to Ensembl Genome Browser on chromosome 12See the combined annotation on chromosome 12 in Sequence Viewer

Chromosome Start Stop Links
12 25108548 25108823 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 12Link to Ensembl Genome Browser on chromosome 12
12 25110127 25110240 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 12Link to Ensembl Genome Browser on chromosome 12
12 25111772 25111939 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 12Link to Ensembl Genome Browser on chromosome 12
12 25114656 25114870 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 12Link to Ensembl Genome Browser on chromosome 12
12 25119145 25119301 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 12Link to Ensembl Genome Browser on chromosome 12
12 25121753 25121913 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 12Link to Ensembl Genome Browser on chromosome 12
12 25123211 25123286 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 12Link to Ensembl Genome Browser on chromosome 12
12 25144365 25144677 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 12Link to Ensembl Genome Browser on chromosome 12
12 25147001 25147104 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 12Link to Ensembl Genome Browser on chromosome 12
12 25149628 25149774 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 12Link to Ensembl Genome Browser on chromosome 12
12 25154319 25154456 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 12Link to Ensembl Genome Browser on chromosome 12
12 25155311 25155412 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 12Link to Ensembl Genome Browser on chromosome 12
12 25158472 25158563 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 12Link to Ensembl Genome Browser on chromosome 12
12 25161113 25161197 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 12Link to Ensembl Genome Browser on chromosome 12
12 25195076 25195078 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 12Link to Ensembl Genome Browser on chromosome 12

CCDS Sequence Data
Blue highlighting indicates alternating exons.
Red highlighting indicates amino acids encoded across a splice junction.
 
Mouse over the nucleotide or protein sequence below and click on the highlighted codon or residue to select the pair.

Nucleotide Sequence (2151 nt):
ATGTCTGGCAGTAAGAAAAAGAAAGTCACCAAAGCTGAACGATTGAAGCTGCTACAAGAGGAGGAGGAGA
GACGACTGAAAGAGGAAGAGGAAGCCCGTTTGAAATATGAGAAAGAAGAAATGGAAAGGCTTGAAATACA
GCGAATTGAGAAAGAAAAATGGCATCGACTTGAAGCAAAAGATCTAGAAAGGAGAAATGAAGAACTTGAA
GAACTTTATTTATTAGAGAGGTGTTTTCCTGAAGCAGAGAAATTGAAACAGGAAACTAAATTGCTTTCTC
AGTGGAAGCACTACATTCAATGTGATGGGAGTCCTGATCCTTCAGTAGCCCAAGAAATGAACACGTTTAT
TAGTTTGTGGAAAGAGAAAACAAATGAGACTTTTGAGGAAGTGATTGAGAAGAGTAAAGTAGTGCTAAAT
TTAATTGAGAAATTGAAATTTATTTTACTGGAAACTCCACCATGTGATTTGCAAGATAAAAATATAATAC
AGTACCAAGAATCAATACTACAACTGCAGGAGCTCCTTCATCTTAAATTCGGTGTAGCCACAGAAATACT
TCTCAAACAAGCTAGTACTTTGGCAGATCTGGACAGTGGAAATATGGAAAAAGTCATTAAAGATGAAAAT
GTTACTCTGTATGTGTGGGCAAACCTCAAGAAGAATCCAAGGCACAGAAGTGTTAGATTCTCTGAAACAC
AAATTGGATTTGAGATTCCAAGGATATTAGCAACAAGTGACATTGCTGTACGACTCCTGCATACCCACTA
TGATCATGTTTCTGCACTGCACCCTGTTTCAACACCATCAAAAGAATACACTTCTGCAGTAACTGAGCTT
GTCAAAGATGATGTTAAGAATGTAGAAAAAGCAATCAGCAAGGAGGTCGAAGAAGAGTCCAAACAACAAG
AAAGAGGGTCTCACTTAATTCAGGAGGAAGAAATAAAAGTTGAGGAGGAACAAGGTGATATTGAAGTGAA
AATGAGTTCTGCTGAGGAAGAATCTGAAGCCATAAAATGTGAACGAGAGATGAAAGTATTAAGTGAAACT
GTTTCAGCAGCACAGTTGTTGCTGGTAGAGAATTCTTCTGAAAAGCCAGATTTCTTTGAAGACAATGTGG
TGGATTTATGCCAGTTCACAACTCTGGGTGGAGTATACCACTTGGATATTTTGGAGCTTCCTCCACAGTG
TAAACCAGTGAAGGGATGGATGATTGTGGAAATACTCAAAGAAGGATTACAGAAATACACATATCCTCCG
GAAACTACAGAAGAGTTTGAGACAGAAAATGCTTTCCCACCTATAGAGGTCACACTTGAGGTTCATGAGA
ATGTAATCTTTTTTGAGGATCCTGTGGTTGTAAGGTGGGATGCTGAAGGTAAACATTGGAGAACTGATGG
CATCAGCAATGTATCCTACAAACCAAAAGAAAGACTTGTAACATTCAGCCTGGACACCTTTGGCCCTGTT
ACCTTGATTCAAGATGCTCATATTAACATGCCGTACCAGTCATGGGAACTAAGACCACTTGATGTAAATA
AAGTACTTTTAACTGTGACTACAGTATTTACTGAGATTCAAATACAAATTAAGGAAAACCTCTGCATGTT
ATCTTCAATCAAACTAAAAGACAAGAAACACATCTCTATTTTGGAAGGAACCTGGATGACTCCTATTCCT
TTCATTATTGCTTTGAAAGAAGCTGGACTGAATATCTTTCCTACTAGACACTCTCATTTTTATGTTATTA
TAAACAATAAGGTTCCTTTGGTAGAAGTGAAAGCTTATCGACAGATGGCCCTACTAAGTTCTGCTTTTGC
ATTTGGTTGGAGCAAGTGGAACCTACTATGTAATTCTACAAAAGTCGTATTTAAGGTGAGGGAACACCTT
ACTGAAGCATGTACTGAGAATCCTAATTGGGCCCTTTTAATGTTTAGTGGTGACAGAGCACAAAGACTGA
AGATCAAGGAAGAGAGTGAGGCATTTTCTGAAGCACTTAAAGAAGAAACTGAGTTTCATTCTACTTTATA
TCACATGGTGAAGGATTTTGCTTCTGAGGAAGCAATGGAGAAAGTCAGGAGTTCCAACTGTCAGTTTGTC
AACTCTGTGTGCCACATGCTGCTCTCTACCAGATTGCTCAGCTACTCCTAA

Translation (716 aa):
MSGSKKKKVTKAERLKLLQEEEERRLKEEEEARLKYEKEEMERLEIQRIEKEKWHRLEAKDLERRNEELE
ELYLLERCFPEAEKLKQETKLLSQWKHYIQCDGSPDPSVAQEMNTFISLWKEKTNETFEEVIEKSKVVLN
LIEKLKFILLETPPCDLQDKNIIQYQESILQLQELLHLKFGVATEILLKQASTLADLDSGNMEKVIKDEN
VTLYVWANLKKNPRHRSVRFSETQIGFEIPRILATSDIAVRLLHTHYDHVSALHPVSTPSKEYTSAVTEL
VKDDVKNVEKAISKEVEEESKQQERGSHLIQEEEIKVEEEQGDIEVKMSSAEEESEAIKCEREMKVLSET
VSAAQLLLVENSSEKPDFFEDNVVDLCQFTTLGGVYHLDILELPPQCKPVKGWMIVEILKEGLQKYTYPP
ETTEEFETENAFPPIEVTLEVHENVIFFEDPVVVRWDAEGKHWRTDGISNVSYKPKERLVTFSLDTFGPV
TLIQDAHINMPYQSWELRPLDVNKVLLTVTTVFTEIQIQIKENLCMLSSIKLKDKKHISILEGTWMTPIP
FIIALKEAGLNIFPTRHSHFYVIINNKVPLVEVKAYRQMALLSSAFAFGWSKWNLLCNSTKVVFKVREHL
TEACTENPNWALLMFSGDRAQRLKIKEESEAFSEALKEETEFHSTLYHMVKDFASEEAMEKVRSSNCQFV
NSVCHMLLSTRLLSYS


Links Key
 Links to:   History report
  BLAST report
  Entrez Gene
  Nucleotide report
  Protein report
 Re-query CCDS DB by:   CCDS ID
  Gene ID
  Nucleotide ID
  Protein ID
 Genome Browser Links:   Ensembl Genome Browser
  NCBI Sequence Viewer
  UCSC Genome Browser
  VEGA Genome Browser

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