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Report for CCDS41750.1 (current version)

CCDS Status Species Chrom. Gene CCDS Release NCBI Annotation Release Ensembl Annotation Release Links
41750.1 Public Homo sapiens 12 KLRF1 24 110 108 CCDS HistoryNCBI Gene:51348Re-query CCDS DB by CCDS ID:41750.1Re-query CCDS DB by GeneID:51348See the combined annotation on chromosome 12 in Sequence Viewer

Public since: CCDS release 5, NCBI annotation release 36.3, Ensembl annotation release 47

Review status: Reviewed (by RefSeq and Havana)

Sequence IDs included in CCDS 41750.1

Original Current Source Nucleotide ID Protein ID MANE Status in CCDS Seq. Status Links
Original member Current member EBI ENST00000617889.5 ENSP00000483713.1 MANE Select Accepted alive Link to Ensembl Transcript Viewer:ENST00000617889.5Link to Ensembl Protein Viewer:ENSP00000483713.1Re-query CCDS DB by Nucleotide ID:ENST00000617889Re-query CCDS DB by Protein ID:ENSP00000483713
Original member Current member NCBI NM_016523.3 NP_057607.1 MANE Select Accepted alive Link to Nucleotide Sequence:NM_016523.3Link to Protein Sequence:NP_057607.1Re-query CCDS DB by Nucleotide ID:NM_016523Re-query CCDS DB by Protein ID:NP_057607Link to BLAST:NP_057607.1

RefSeq Length Related UniProtKB/SwissProt Length Identity Gaps Mismatches
NP_057607.1 231 Q9NZS2-1 231 100% 0 0

Chromosomal Locations for CCDS 41750.1

Assembly GRCh38.p14 (GCF_000001405.40)

On '+' strand of Chromosome 12 (NC_000012.12)
Genome Browser links: Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 12Link to Ensembl Genome Browser on chromosome 12See the combined annotation on chromosome 12 in Sequence Viewer

Chromosome Start Stop Links
12 9827545 9827629 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 12Link to Ensembl Genome Browser on chromosome 12
12 9832316 9832414 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 12Link to Ensembl Genome Browser on chromosome 12
12 9833303 9833452 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 12Link to Ensembl Genome Browser on chromosome 12
12 9841812 9841951 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 12Link to Ensembl Genome Browser on chromosome 12
12 9842321 9842433 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 12Link to Ensembl Genome Browser on chromosome 12
12 9844418 9844526 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 12Link to Ensembl Genome Browser on chromosome 12

CCDS Sequence Data
Blue highlighting indicates alternating exons.
Red highlighting indicates amino acids encoded across a splice junction.
 
Mouse over the nucleotide or protein sequence below and click on the highlighted codon or residue to select the pair.

Nucleotide Sequence (696 nt):
ATGCAAGATGAAGAAAGATACATGACATTGAATGTACAGTCAAAGAAAAGGAGTTCTGCCCAAACATCTC
AACTTACATTTAAAGATTATTCAGTGACGTTGCACTGGTATAAAATCTTACTGGGAATATCTGGAACCGT
GAATGGTATTCTCACTTTGACTTTGATCTCCTTGATCCTGTTGGTTTCTCAGGGAGTATTGCTAAAATGC
CAAAAAGGAAGTTGTTCAAATGCCACTCAGTATGAGGACACTGGAGATCTAAAAGTGAATAATGGCACAA
GAAGAAATATAAGTAATAAGGACCTTTGTGCTTCGAGATCTGCAGACCAGACAGTACTATGCCAATCAGA
ATGGCTCAAATACCAAGGGAAGTGTTATTGGTTCTCTAATGAGATGAAAAGCTGGAGTGACAGTTATGTG
TATTGTTTGGAAAGAAAATCTCATCTACTAATCATACATGACCAACTTGAAATGGCTTTTATACAGAAAA
ACCTAAGACAATTAAACTACGTATGGATTGGGCTTAACTTTACCTCCTTGAAAATGACATGGACTTGGGT
GGATGGTTCTCCAATAGATTCAAAGATATTCTTCATAAAGGGACCAGCTAAAGAAAACAGCTGTGCTGCC
ATTAAGGAAAGCAAAATTTTCTCTGAAACCTGCAGCAGTGTTTTCAAATGGATTTGTCAGTATTAG

Translation (231 aa):
MQDEERYMTLNVQSKKRSSAQTSQLTFKDYSVTLHWYKILLGISGTVNGILTLTLISLILLVSQGVLLKC
QKGSCSNATQYEDTGDLKVNNGTRRNISNKDLCASRSADQTVLCQSEWLKYQGKCYWFSNEMKSWSDSYV
YCLERKSHLLIIHDQLEMAFIQKNLRQLNYVWIGLNFTSLKMTWTWVDGSPIDSKIFFIKGPAKENSCAA
IKESKIFSETCSSVFKWICQY


Links Key
 Links to:   History report
  BLAST report
  Entrez Gene
  Nucleotide report
  Protein report
 Re-query CCDS DB by:   CCDS ID
  Gene ID
  Nucleotide ID
  Protein ID
 Genome Browser Links:   Ensembl Genome Browser
  NCBI Sequence Viewer
  UCSC Genome Browser
  VEGA Genome Browser

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